BLASTX nr result

ID: Lithospermum22_contig00020126 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00020126
         (992 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263359.1| PREDICTED: small nuclear ribonucleoprotein-a...   174   2e-41
ref|XP_002332199.1| predicted protein [Populus trichocarpa] gi|2...   174   3e-41
ref|XP_002317685.1| predicted protein [Populus trichocarpa] gi|2...   173   7e-41
gb|ABK93409.1| unknown [Populus trichocarpa]                          173   7e-41
ref|XP_003617477.1| Small nuclear ribonucleoprotein-associated p...   172   1e-40

>ref|XP_002263359.1| PREDICTED: small nuclear ribonucleoprotein-associated protein B'
           [Vitis vinifera] gi|147774905|emb|CAN61706.1|
           hypothetical protein VITISV_001610 [Vitis vinifera]
          Length = 276

 Score =  174 bits (442), Expect = 2e-41
 Identities = 92/142 (64%), Positives = 98/142 (69%), Gaps = 3/142 (2%)
 Frame = +3

Query: 126 LQYINYRMRVHIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPLKGSK-EEREDXXXXX 302
           LQYINYRMRV IQDGRQL+GKFMAFDRHMNLVLGDCEEFRKLPP KG K EERE+     
Sbjct: 10  LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKNEEREERRTLG 69

Query: 303 XXXXXXXXXXSMTVEGPPPPDESRLKATANA--VXXXXXXXXXXXXXXXXXIQAQPGLAG 476
                     SMTVEGPPPP+ESR KA   A                    IQAQPGLAG
Sbjct: 70  LVLLRGEEVISMTVEGPPPPEESRAKAVGAAAMAGPGIGRAAGRGIPTAPLIQAQPGLAG 129

Query: 477 PVRGIGGPSPQMMQPQISRPPI 542
           PVRG+GGP+P MMQPQISRPP+
Sbjct: 130 PVRGVGGPAPGMMQPQISRPPV 151


>ref|XP_002332199.1| predicted protein [Populus trichocarpa] gi|222875306|gb|EEF12437.1|
           predicted protein [Populus trichocarpa]
          Length = 289

 Score =  174 bits (441), Expect = 3e-41
 Identities = 93/143 (65%), Positives = 97/143 (67%), Gaps = 4/143 (2%)
 Frame = +3

Query: 126 LQYINYRMRVHIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPLKGSK--EEREDXXXX 299
           LQYINYRMRV IQDGRQL+GKFMAFDRHMNLVLGDCEEFRKLPP KG K  EERED    
Sbjct: 10  LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKNNEEREDRRTL 69

Query: 300 XXXXXXXXXXXSMTVEGPPPPDESRLKA--TANAVXXXXXXXXXXXXXXXXXIQAQPGLA 473
                      SMTVEGPPPP+ESR KA   A A                  IQAQPGLA
Sbjct: 70  GLVLLRGEEVISMTVEGPPPPEESRAKAVSAAAASGPGLGRAAGRGIPTAPLIQAQPGLA 129

Query: 474 GPVRGIGGPSPQMMQPQISRPPI 542
           GPVRG+GGPSP MMQPQ  RPP+
Sbjct: 130 GPVRGVGGPSPGMMQPQFMRPPV 152


>ref|XP_002317685.1| predicted protein [Populus trichocarpa] gi|222860750|gb|EEE98297.1|
           predicted protein [Populus trichocarpa]
          Length = 250

 Score =  173 bits (438), Expect = 7e-41
 Identities = 91/144 (63%), Positives = 99/144 (68%), Gaps = 4/144 (2%)
 Frame = +3

Query: 126 LQYINYRMRVHIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPLKGSK--EEREDXXXX 299
           LQYINYRMRV IQDGRQL+GKFMAFDRHMNLVLGDCEEFRKLPP KG K  EERED    
Sbjct: 10  LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKNNEEREDRRTL 69

Query: 300 XXXXXXXXXXXSMTVEGPPPPDESRLKATANA--VXXXXXXXXXXXXXXXXXIQAQPGLA 473
                      SMTVEGPPPP+ESR KA + A                    +QAQPGLA
Sbjct: 70  GLVLLRGEEVISMTVEGPPPPEESRAKAVSAAAVAGPGLGRAAGRGIPTAPLVQAQPGLA 129

Query: 474 GPVRGIGGPSPQMMQPQISRPPIN 545
           GPVRG+GGPSP MMQPQ+SRP ++
Sbjct: 130 GPVRGVGGPSPGMMQPQLSRPQLS 153


>gb|ABK93409.1| unknown [Populus trichocarpa]
          Length = 286

 Score =  173 bits (438), Expect = 7e-41
 Identities = 91/144 (63%), Positives = 99/144 (68%), Gaps = 4/144 (2%)
 Frame = +3

Query: 126 LQYINYRMRVHIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPLKGSK--EEREDXXXX 299
           LQYINYRMRV IQDGRQL+GKFMAFDRHMNLVLGDCEEFRKLPP KG K  EERED    
Sbjct: 10  LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKNNEEREDRRTL 69

Query: 300 XXXXXXXXXXXSMTVEGPPPPDESRLKATANA--VXXXXXXXXXXXXXXXXXIQAQPGLA 473
                      SMTVEGPPPP+ESR KA + A                    +QAQPGLA
Sbjct: 70  GLVLLRGEEVISMTVEGPPPPEESRAKAVSAAAVAGPGLGRAAGRGIPTAPLVQAQPGLA 129

Query: 474 GPVRGIGGPSPQMMQPQISRPPIN 545
           GPVRG+GGPSP MMQPQ+SRP ++
Sbjct: 130 GPVRGVGGPSPGMMQPQLSRPQLS 153


>ref|XP_003617477.1| Small nuclear ribonucleoprotein-associated protein B [Medicago
           truncatula] gi|355518812|gb|AET00436.1| Small nuclear
           ribonucleoprotein-associated protein B [Medicago
           truncatula]
          Length = 394

 Score =  172 bits (436), Expect = 1e-40
 Identities = 91/146 (62%), Positives = 98/146 (67%), Gaps = 5/146 (3%)
 Frame = +3

Query: 126 LQYINYRMRVHIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPLKGSKE---EREDXXX 296
           LQYINYRMRV IQDGRQL+GKFMAFDRHMNLVLGDCEEFRKLPP KG K    +RED   
Sbjct: 10  LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKTTDGDREDRRT 69

Query: 297 XXXXXXXXXXXXSMTVEGPPPPDESRLKA--TANAVXXXXXXXXXXXXXXXXXIQAQPGL 470
                       SM VEGPPPP+ESR KA   A                    IQAQPGL
Sbjct: 70  LGLVLLRGEEVISMAVEGPPPPEESRSKAVNAAAMAGPGIGRAAGRGIPPAPVIQAQPGL 129

Query: 471 AGPVRGIGGPSPQMMQPQISRPPINY 548
           AGPVRG+GGP+P MMQPQISRPP++Y
Sbjct: 130 AGPVRGVGGPAPGMMQPQISRPPVSY 155


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