BLASTX nr result

ID: Lithospermum22_contig00020121 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00020121
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis t...    62   6e-08
dbj|BAF02002.1| hypothetical protein [Arabidopsis thaliana]            62   6e-08
emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera]    60   2e-07
emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]    59   5e-07
emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera]    59   5e-07

>dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1462

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
 Frame = -1

Query: 215 GVNSEQFQQLLSPLGTTN--TTDRLDGKFSSNLWLINTGASNHVTGNLSLLSDLCDMPLC 42
           G+N EQ++QL   L   N  +T+    KF    W+I++GA+NH+TG L  L D+CDMP  
Sbjct: 310 GLNDEQWKQLRQMLKERNFNSTNTKSSKFFLESWIIDSGATNHMTGTLEFLRDVCDMPPI 369

Query: 41  TVGLPDG 21
            + LPDG
Sbjct: 370 MIKLPDG 376


>dbj|BAF02002.1| hypothetical protein [Arabidopsis thaliana]
          Length = 269

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
 Frame = -1

Query: 215 GVNSEQFQQLLSPLGTTN--TTDRLDGKFSSNLWLINTGASNHVTGNLSLLSDLCDMPLC 42
           G+N EQ++QL   L   N  +T+    KF    W+I++GA+NH+TG L  L D+CDMP  
Sbjct: 72  GLNDEQWKQLRQMLKERNFNSTNTKSSKFFLESWIIDSGATNHMTGTLEFLRDVCDMPPI 131

Query: 41  TVGLPDG 21
            + LPDG
Sbjct: 132 MIKLPDG 138


>emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera]
          Length = 1191

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
 Frame = -1

Query: 215 GVNSEQFQQLLSPLGTTNT-TDRLDGKFSSNLWLINTGASNHVTGNLSLLSDLCDMPLCT 39
           G  +EQ++ L   +G      DRL+GKF +  W+I+TGA++HVTG+LS L D   +  C 
Sbjct: 65  GTITEQWKALAGLIGNAQVPNDRLNGKFDTKSWIIDTGATHHVTGDLSWLFDTIALFECP 124

Query: 38  VGLPDGTKDVS 6
           VGLP+G   V+
Sbjct: 125 VGLPNGESVVA 135


>emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]
          Length = 1450

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/67 (44%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
 Frame = -1

Query: 203 EQFQQLLSPLGTTNT-TDRLDGKFSSNLWLINTGASNHVTGNLSLLSDLCDMPLCTVGLP 27
           EQ++ L   +G      DRL+GKF +  W+I+TGA++HVTG+LS L D   +  C VGLP
Sbjct: 357 EQWKALAGLIGNAQVPNDRLNGKFDTKSWIIDTGATHHVTGDLSWLFDTIALFECLVGLP 416

Query: 26  DGTKDVS 6
           +G   V+
Sbjct: 417 NGESVVA 423


>emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera]
          Length = 1461

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
 Frame = -1

Query: 215 GVNSEQFQQLLSPLGTTNTTD-RLDGKFSSNLWLINTGASNHVTGNLSLLSDLCDMPLCT 39
           G   EQ++ L   +G     D RL+GKF +  W+I+TGA++HVTG+LS L D   +  C 
Sbjct: 657 GTIIEQWKALAGLIGNAQVPDDRLNGKFDTKSWIIDTGATHHVTGDLSWLFDTIALFECP 716

Query: 38  VGLPDGTKDVS 6
           VGLP+G   V+
Sbjct: 717 VGLPNGESVVA 727


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