BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00020047
         (1807 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   671   0.0  
emb|CBI18448.3| unnamed protein product [Vitis vinifera]              662   0.0  
ref|XP_002526838.1| ribosomal pseudouridine synthase, putative [...   640   0.0  
ref|XP_004158518.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   639   0.0  
ref|XP_004138653.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   639   0.0  

>ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Vitis
            vinifera]
          Length = 479

 Score =  671 bits (1732), Expect = 0.0
 Identities = 332/478 (69%), Positives = 387/478 (80%), Gaps = 3/478 (0%)
 Frame = +2

Query: 134  MWKKTLSEDGQKMVMKARHYSRTKSKVRXXXXXXXXXIIRVSNHIAHLGRPKAGPKPRQL 313
            MWK  L E  Q +    RHYSR    +          +IRVSN++A LG PK GPKPRQL
Sbjct: 1    MWKNVLHEC-QGLFPVVRHYSR----IAPPRPASAAPVIRVSNNVAQLGSPKEGPKPRQL 55

Query: 314  LSLPPFPGGYPLAGRK---PSGTGQHVTAISWLKYYFDDIPPPLIQSHFNKGLVKVECLD 484
            LSLPPFP  +PL G+     SG   HVTAISW+KYYFD+IP  ++QSHFNKGLV +E  +
Sbjct: 56   LSLPPFPA-HPLPGKSLVNVSGLPTHVTAISWIKYYFDEIPGSVVQSHFNKGLVHMERSN 114

Query: 485  SVGLTNSRKGIAKSMRKINHSEVMKKGARIYAPVTVTEAKINKRFDVIPTGTQYPNADEI 664
                +  ++G  K +RKI  +EVM+ G RIY PV+V EA+I+KRFD IP+GT +PNADEI
Sbjct: 115  LDDSSLEKEGQIKPLRKIKPNEVMEAGTRIYVPVSVAEARISKRFDTIPSGTLHPNADEI 174

Query: 665  QYLQRLVMYKDSAILVLNKPPKLPVKGALPVHNSMDALAAASLTYDYDEGPKLVHRLDTE 844
            +YLQRLV YKD AILVLNKPPK+P+KG LPVHNSMDALAAA+LT+DY+EGPKLVHRLD E
Sbjct: 175  EYLQRLVTYKDPAILVLNKPPKVPLKGNLPVHNSMDALAAAALTFDYEEGPKLVHRLDRE 234

Query: 845  SSGILLMGRLKESISYLHYLFSDIKESKPLSKAWNSACDSMYQRYWALVIGSPKEKEGLI 1024
            SSG+LLMGR KES+++LH+LFSDI ++K LSKAW+ AC++  QRYWALVIGSPK+KEG+I
Sbjct: 235  SSGLLLMGRTKESVAHLHWLFSDINKAKSLSKAWDDACEATCQRYWALVIGSPKQKEGVI 294

Query: 1025 SAPLTKVMLDDGKTERVILANNSGLEASQEAVTEYRVLGPMINGCSWIELCPRTSRKHQL 1204
             APL+KV+LDDGKTERVILAN SGLEASQEA+TEYRVLGPMINGCSWIELCPRTSRKHQL
Sbjct: 295  HAPLSKVLLDDGKTERVILANQSGLEASQEAITEYRVLGPMINGCSWIELCPRTSRKHQL 354

Query: 1205 RVHCAEALGTPIVGDYKYGWFVHSRWKQMPRVDYEPTTGQPYKLRRPEGLDVQKGSVLSK 1384
            RVHCAEALGTPIVGDYKYGWFVH RWKQMPRVD EPTTG+PYK+RRPEGLDVQKGSVLSK
Sbjct: 355  RVHCAEALGTPIVGDYKYGWFVHRRWKQMPRVDLEPTTGKPYKMRRPEGLDVQKGSVLSK 414

Query: 1385 VPLLHLHCREIVLPNIEKFMELHKIDSRNCSSESKYGSNPNLLRFVAPMPTHMKISWN 1558
            VPLLHLHCRE++LPNI KF+ +     +N +   K    P++LRFVA MP HMKISWN
Sbjct: 415  VPLLHLHCRELILPNIAKFLPILDPKPKNQNQYPKLSLKPDILRFVASMPNHMKISWN 472


>emb|CBI18448.3| unnamed protein product [Vitis vinifera]
          Length = 481

 Score =  662 bits (1708), Expect = 0.0
 Identities = 329/480 (68%), Positives = 387/480 (80%), Gaps = 5/480 (1%)
 Frame = +2

Query: 134  MWKKTLSEDGQKMVMKARHYSRTKSKVRXXXXXXXXXIIRVSNHIAHLGRPKAGPKPRQL 313
            MWK  L E  Q +    RHYSR    +          +IRVSN++A LG PK GPKPRQL
Sbjct: 1    MWKNVLHEC-QGLFPVVRHYSR----IAPPRPASAAPVIRVSNNVAQLGSPKEGPKPRQL 55

Query: 314  LSLPPFPGGYPLAGRK---PSGTGQHVTAISWLKYYFDDIPPPLIQSHFNKGLVKVECLD 484
            LSLPPFP  +PL G+     SG   HVTAISW+KYYFD+IP  ++QSHFNKGLV +E  +
Sbjct: 56   LSLPPFPA-HPLPGKSLVNVSGLPTHVTAISWIKYYFDEIPGSVVQSHFNKGLVHMERSN 114

Query: 485  SVGLTNSRKGIAKSMRKINHSEVMKKGARIYAPVTVTEAKINKRFDVIPTGTQYPNADEI 664
                +  ++G  K +RKI  +EVM+ G RIY PV+V EA+I+KRFD IP+GT +PNADEI
Sbjct: 115  LDDSSLEKEGQIKPLRKIKPNEVMEAGTRIYVPVSVAEARISKRFDTIPSGTLHPNADEI 174

Query: 665  QYLQRL--VMYKDSAILVLNKPPKLPVKGALPVHNSMDALAAASLTYDYDEGPKLVHRLD 838
            +YLQRL  + ++D AILVLNKPPK+P+KG LPVHNSMDALAAA+LT+DY+EGPKLVHRLD
Sbjct: 175  EYLQRLWLLKFQDPAILVLNKPPKVPLKGNLPVHNSMDALAAAALTFDYEEGPKLVHRLD 234

Query: 839  TESSGILLMGRLKESISYLHYLFSDIKESKPLSKAWNSACDSMYQRYWALVIGSPKEKEG 1018
             ESSG+LLMGR KES+++LH+LFSDI ++K LSKAW+ AC++  QRYWALVIGSPK+KEG
Sbjct: 235  RESSGLLLMGRTKESVAHLHWLFSDINKAKSLSKAWDDACEATCQRYWALVIGSPKQKEG 294

Query: 1019 LISAPLTKVMLDDGKTERVILANNSGLEASQEAVTEYRVLGPMINGCSWIELCPRTSRKH 1198
            +I APL+KV+LDDGKTERVILAN SGLEASQEA+TEYRVLGPMINGCSWIELCPRTSRKH
Sbjct: 295  VIHAPLSKVLLDDGKTERVILANQSGLEASQEAITEYRVLGPMINGCSWIELCPRTSRKH 354

Query: 1199 QLRVHCAEALGTPIVGDYKYGWFVHSRWKQMPRVDYEPTTGQPYKLRRPEGLDVQKGSVL 1378
            QLRVHCAEALGTPIVGDYKYGWFVH RWKQMPRVD EPTTG+PYK+RRPEGLDVQKGSVL
Sbjct: 355  QLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPRVDLEPTTGKPYKMRRPEGLDVQKGSVL 414

Query: 1379 SKVPLLHLHCREIVLPNIEKFMELHKIDSRNCSSESKYGSNPNLLRFVAPMPTHMKISWN 1558
            SKVPLLHLHCRE++LPNI KF+ +     +N +   K    P++LRFVA MP HMKISWN
Sbjct: 415  SKVPLLHLHCRELILPNIAKFLPILDPKPKNQNQYPKLSLKPDILRFVASMPNHMKISWN 474


>ref|XP_002526838.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
            gi|223533842|gb|EEF35573.1| ribosomal pseudouridine
            synthase, putative [Ricinus communis]
          Length = 468

 Score =  640 bits (1651), Expect = 0.0
 Identities = 324/475 (68%), Positives = 372/475 (78%)
 Frame = +2

Query: 134  MWKKTLSEDGQKMVMKARHYSRTKSKVRXXXXXXXXXIIRVSNHIAHLGRPKAGPKPRQL 313
            MWK       +++V + R YSR    +          +IRVSN++AHLG PK GPKPRQL
Sbjct: 1    MWKNIYC---RRVVSQGRSYSR----IAPPPPAYANPVIRVSNNVAHLGSPKDGPKPRQL 53

Query: 314  LSLPPFPGGYPLAGRKPSGTGQHVTAISWLKYYFDDIPPPLIQSHFNKGLVKVECLDSVG 493
            LSLPPFPG  PL GR  +    HVTAISW+KYYFD+I    IQSHFNKGL  +EC +  G
Sbjct: 54   LSLPPFPG-LPLPGR--NSMASHVTAISWVKYYFDEILDSAIQSHFNKGLAHIECPNGSG 110

Query: 494  LTNSRKGIAKSMRKINHSEVMKKGARIYAPVTVTEAKINKRFDVIPTGTQYPNADEIQYL 673
              +   G   S+RKI H+++M+ GAR++  V+V E +I+KRFD IP+GT YPNADEIQYL
Sbjct: 111  --SIEYGGQMSLRKIKHNDIMEAGARVHVAVSVAETRISKRFDTIPSGTLYPNADEIQYL 168

Query: 674  QRLVMYKDSAILVLNKPPKLPVKGALPVHNSMDALAAASLTYDYDEGPKLVHRLDTESSG 853
            QRLV YKDSAI+VLNKPP+LPVKG LP+HNSMDALAAA+L+YDYDEGPKLV RLD ESSG
Sbjct: 169  QRLVKYKDSAIIVLNKPPRLPVKGNLPLHNSMDALAAAALSYDYDEGPKLVQRLDRESSG 228

Query: 854  ILLMGRLKESISYLHYLFSDIKESKPLSKAWNSACDSMYQRYWALVIGSPKEKEGLISAP 1033
            +LLMGR KESI +L +LFSD+ +S    KAWN AC + YQRYWALVIGSPKEKEGLI AP
Sbjct: 229  LLLMGRTKESIDHLQWLFSDVNKSNSRCKAWNDACKATYQRYWALVIGSPKEKEGLIRAP 288

Query: 1034 LTKVMLDDGKTERVILANNSGLEASQEAVTEYRVLGPMINGCSWIELCPRTSRKHQLRVH 1213
            L+KV+L+DGKTERV+LA +SGLEASQEA+TEYRVLGP INGCSWIEL P TSRKHQLRVH
Sbjct: 289  LSKVLLNDGKTERVVLAQHSGLEASQEALTEYRVLGPRINGCSWIELRPLTSRKHQLRVH 348

Query: 1214 CAEALGTPIVGDYKYGWFVHSRWKQMPRVDYEPTTGQPYKLRRPEGLDVQKGSVLSKVPL 1393
            CAEALGTPIVGDYKYGW VH RWKQMPRVD EP +G+PYKLRRP GLDVQKGSVLSKVPL
Sbjct: 349  CAEALGTPIVGDYKYGWCVHQRWKQMPRVDIEPFSGKPYKLRRPAGLDVQKGSVLSKVPL 408

Query: 1394 LHLHCREIVLPNIEKFMELHKIDSRNCSSESKYGSNPNLLRFVAPMPTHMKISWN 1558
            LHLHCRE VLPNI KF+ +    S N        + P+LLRFVA MPTHMKISWN
Sbjct: 409  LHLHCREFVLPNIAKFLAVLNEKSENI--HPALDAKPDLLRFVASMPTHMKISWN 461


>ref|XP_004158518.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Cucumis
            sativus]
          Length = 471

 Score =  639 bits (1649), Expect = 0.0
 Identities = 321/467 (68%), Positives = 366/467 (78%), Gaps = 12/467 (2%)
 Frame = +2

Query: 194  SRTKSKVRXXXXXXXXXIIRVSNHIAHLGRPKAGPKPRQLLSLPPFPGGYPLAGRKP--- 364
            +R  S++          IIRVSN+IA LG PK GPK RQLLSLPPFPG YPL G+     
Sbjct: 13   TRCYSRISPPPPAYAKPIIRVSNNIAQLGSPKEGPKARQLLSLPPFPG-YPLPGKNQVGV 71

Query: 365  SGTGQHVTAISWLKYYFDDIPPPLIQSHFNKGLVKVECLDSVGLTNSRKGIAKSMRKINH 544
            SG   HVTAI W+KYYFD+I    IQSHF KGLV+VEC    GL    KG  K MRKI  
Sbjct: 72   SGESTHVTAIRWVKYYFDEIQDSQIQSHFRKGLVQVECPQLGGL--DEKGNLKPMRKIRS 129

Query: 545  SEVMKKGARIYAPVTVTEAKINKRFDVIPTGTQYPNADEIQYLQRLVMYKDSAILVLNKP 724
             E+M+ GARI+ PV+V E K+ +RFD IP+GT YPNADEI+YLQRLV YKDSAI+VLNKP
Sbjct: 130  GEIMETGARIHLPVSVAEMKVARRFDTIPSGTLYPNADEIKYLQRLVKYKDSAIIVLNKP 189

Query: 725  PKLPVKGALPVHNSMDALAAASLTYDYDEGPKLVHRLDTESSGILLMGRLKESISYLHYL 904
            PKLPVKG LPVHNSMDALA A+L+YDYD+GPKLVHRLD ESSGILLMGR KES+ +L +L
Sbjct: 190  PKLPVKGTLPVHNSMDALADAALSYDYDDGPKLVHRLDRESSGILLMGRTKESVDHLQWL 249

Query: 905  FSDIKESKPLSKAWNSACDSMYQRYWALVIGSPKEKEGLISAPLTKVMLDDGKTERVILA 1084
            FS+I+ +K   KAW  AC++ YQ+YWALVIG P+E+EG+ISAPL+KV+LDDGKTERVILA
Sbjct: 250  FSNIRNAKFTCKAWEEACNATYQKYWALVIGCPREREGVISAPLSKVLLDDGKTERVILA 309

Query: 1085 NNSGLEASQEAVTEYRVLGPMINGCSWIELCPRTSRKHQLRVHCAEALGTPIVGDYKYGW 1264
            N + +EASQEA+TEYRVLGP INGCSWIELCPRTSRKHQLR+HCAEALGTPIVGDYKYGW
Sbjct: 310  NKASIEASQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTPIVGDYKYGW 369

Query: 1265 FVHSRWKQMPRVDYEPTTGQPYKLRRPEGLDVQKGSVLSKVPLLHLHCREIVLPNIEKFM 1444
            FVH RWKQMPRVD EP +G+PYKLRRPEGLDVQKGSVLSKVPLLHLHCRE+VLPNI KF+
Sbjct: 370  FVHRRWKQMPRVDVEPISGRPYKLRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFL 429

Query: 1445 ELHKIDSRNCSSESKYGSNPN---------LLRFVAPMPTHMKISWN 1558
             +             YG  PN         LLRFVA MP+HM+ISWN
Sbjct: 430  NVF------------YGKGPNRPVSSFDSDLLRFVARMPSHMRISWN 464


>ref|XP_004138653.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Cucumis
            sativus]
          Length = 471

 Score =  639 bits (1648), Expect = 0.0
 Identities = 320/467 (68%), Positives = 366/467 (78%), Gaps = 12/467 (2%)
 Frame = +2

Query: 194  SRTKSKVRXXXXXXXXXIIRVSNHIAHLGRPKAGPKPRQLLSLPPFPGGYPLAGRKP--- 364
            +R  S++          IIRVSN+IA LG PK GPK RQLLSLPPFPG YPL G+     
Sbjct: 13   TRCYSRISPPPPAYAKPIIRVSNNIAQLGSPKEGPKARQLLSLPPFPG-YPLPGKNQVGV 71

Query: 365  SGTGQHVTAISWLKYYFDDIPPPLIQSHFNKGLVKVECLDSVGLTNSRKGIAKSMRKINH 544
            SG   HVTAI W+KYYFD+I    IQSHF KGLV+VEC    GL    KG  K MRKI  
Sbjct: 72   SGESTHVTAIRWVKYYFDEIQDSQIQSHFRKGLVQVECPQLGGL--DEKGNLKPMRKIRS 129

Query: 545  SEVMKKGARIYAPVTVTEAKINKRFDVIPTGTQYPNADEIQYLQRLVMYKDSAILVLNKP 724
             E+M+ GARI+ PV+V E K+ +RFD IP+GT YPNADEI+YLQRLV YKDSAI+VLNKP
Sbjct: 130  GEIMETGARIHLPVSVAEMKVARRFDTIPSGTLYPNADEIKYLQRLVKYKDSAIIVLNKP 189

Query: 725  PKLPVKGALPVHNSMDALAAASLTYDYDEGPKLVHRLDTESSGILLMGRLKESISYLHYL 904
            PKLPVKG LPVHNSMDALA A+L+YDYD+GPKLVHRLD ESSGILLMGR KES+ +L +L
Sbjct: 190  PKLPVKGTLPVHNSMDALADAALSYDYDDGPKLVHRLDRESSGILLMGRTKESVDHLQWL 249

Query: 905  FSDIKESKPLSKAWNSACDSMYQRYWALVIGSPKEKEGLISAPLTKVMLDDGKTERVILA 1084
            FS+I+ +K   KAW  AC++ YQ+YWALVIG P+E+EG+ISAPL+KV+LDDGKTERV+LA
Sbjct: 250  FSNIRNAKFTCKAWEEACNATYQKYWALVIGCPREREGVISAPLSKVLLDDGKTERVVLA 309

Query: 1085 NNSGLEASQEAVTEYRVLGPMINGCSWIELCPRTSRKHQLRVHCAEALGTPIVGDYKYGW 1264
            N + +EASQEA+TEYRVLGP INGCSWIELCPRTSRKHQLR+HCAEALGTPIVGDYKYGW
Sbjct: 310  NKASIEASQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTPIVGDYKYGW 369

Query: 1265 FVHSRWKQMPRVDYEPTTGQPYKLRRPEGLDVQKGSVLSKVPLLHLHCREIVLPNIEKFM 1444
            FVH RWKQMPRVD EP +G+PYKLRRPEGLDVQKGSVLSKVPLLHLHCRE+VLPNI KF+
Sbjct: 370  FVHRRWKQMPRVDVEPISGRPYKLRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFL 429

Query: 1445 ELHKIDSRNCSSESKYGSNPN---------LLRFVAPMPTHMKISWN 1558
             +             YG  PN         LLRFVA MP+HM+ISWN
Sbjct: 430  NVF------------YGKGPNRPVSSFDSDLLRFVARMPSHMRISWN 464