BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00020045
         (2229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containi...   757   0.0  
emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]   753   0.0  
ref|XP_002521980.1| pentatricopeptide repeat-containing protein,...   730   0.0  
ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containi...   707   0.0  
ref|XP_002884468.1| pentatricopeptide repeat-containing protein ...   694   0.0  

>ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
            chloroplastic-like [Vitis vinifera]
          Length = 582

 Score =  757 bits (1955), Expect = 0.0
 Identities = 368/576 (63%), Positives = 465/576 (80%), Gaps = 3/576 (0%)
 Frame = -3

Query: 2131 FFSQFPSFHYKLKLPKKLKQFYVQVQFN---TDSFEKSKTMEGVELPEGNKTTLLLSNDF 1961
            FF + P F+ +LK         +    N    D F  S+    V +    +   L S DF
Sbjct: 8    FFPRCPPFNPQLKPTSHSHHTSIVTCRNPNPNDGFN-SRNAPKVGVSAEARPAHLQSYDF 66

Query: 1960 KEPHFVKLLNRSCRAGKYDESLYFLECMVNSGFKPDVILCTKLVKGFFHSKKVDKAIRVM 1781
            +E H +KLLNRSC+AGK++ESLYFLEC+VN G+ PDVILCTKL+KGFF+ K ++KA RVM
Sbjct: 67   RETHLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM 126

Query: 1780 EILENYGEPDVFAYNALITGFCKMNNIEAANKVLFRMKARGFPPDIVTYNIMIGNLCNRG 1601
            EILE++ EPDVFAYNA+I+GFCK+N IEAA +VL RMKARGF PDIVTYNIMIG+LCNR 
Sbjct: 127  EILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRR 186

Query: 1600 KLGLAMKVLDQLLQDGVEPSVITYTILIEATILEGGLQESMKLFDEMLSRSLQPDMYTYN 1421
            KLGLA+KVLDQLL D   P+VITYTILIEATI+EGG+ E+MKL +EML+R L PDMYTYN
Sbjct: 187  KLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYN 246

Query: 1420 VLIRGLCREGLMDKAFEFVQRLPDKGCKPDVISYNMLLRTLLNQGRWSEGGRLMDEMFSA 1241
             +IRG+C+EG++++A E +  L  KGCKPDVISYN+LLR  LNQG+W EG +L+ EMFS 
Sbjct: 247  AIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSR 306

Query: 1240 GCEPNVVTYSILMSSLCRNGKLDEAINLLKVMMDNGLKPNSYTFDPLISAFSREGRVDLA 1061
            GCEPN VTYSIL+SSLCR G++DEAI++LKVM++  L P++Y++DPLISA  +EGR+DLA
Sbjct: 307  GCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLA 366

Query: 1060 IECLDYMLENGCLPGIVNYNTILSAMCKNGNANGALQVFDKLADLGCPPDVSTYNTMMSA 881
            I  +DYM+ NGCLP IVNYNTIL+A+CKNGNAN AL++F+KL  +GCPP+VS+YNTM+SA
Sbjct: 367  IGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISA 426

Query: 880  LWNTGDRVKALQILSEMITERIDPDEITFNSLISCLCRDGLVDQAIGLLEDMQRSGFTPT 701
            LW+ GDR +AL ++  MI++ +DPDEIT+NSLISCLCRDGLV++AIGLL+DM++SGF PT
Sbjct: 427  LWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPT 486

Query: 700  VITHNIIVLGLCKAHRVDDAIDFLEGMVERGCKPNETTYVLLIEGIGFSGWRAQAMEIAN 521
            VI++NI++LGLCK  R+DDAI     M+E+GC+PNETTY+LLIEGIGF+GWR +AME+AN
Sbjct: 487  VISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELAN 546

Query: 520  SLLKMNVISEVAFWRLNKTFPMLDAYKDLSYIEGNK 413
            SL   +VIS+ +F RLNKTFPMLD YK+LS  E  K
Sbjct: 547  SLFSRDVISQDSFKRLNKTFPMLDVYKELSNSETKK 582


>emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
          Length = 592

 Score =  753 bits (1944), Expect = 0.0
 Identities = 356/522 (68%), Positives = 446/522 (85%)
 Frame = -3

Query: 1978 LLSNDFKEPHFVKLLNRSCRAGKYDESLYFLECMVNSGFKPDVILCTKLVKGFFHSKKVD 1799
            L S DF+E H +KLLNRSC+AGK++ESLYFLEC+VN G+ PDVILCTKL+KGFF+ K ++
Sbjct: 71   LQSYDFRETHLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIE 130

Query: 1798 KAIRVMEILENYGEPDVFAYNALITGFCKMNNIEAANKVLFRMKARGFPPDIVTYNIMIG 1619
            KA RVMEILE++ EPDVFAYNA+I+GFCK+N IEAA +VL RMKARGF PDIVTYNIMIG
Sbjct: 131  KASRVMEILESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIG 190

Query: 1618 NLCNRGKLGLAMKVLDQLLQDGVEPSVITYTILIEATILEGGLQESMKLFDEMLSRSLQP 1439
            +LCNR KLGLA+ VLDQLL D   P+VITYTILIEATI+EGG+ E+MKL +EML+R L P
Sbjct: 191  SLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLP 250

Query: 1438 DMYTYNVLIRGLCREGLMDKAFEFVQRLPDKGCKPDVISYNMLLRTLLNQGRWSEGGRLM 1259
            DMYTYN +IRG+C+EG++++A E +  L  KGC+PDVISYN+LLR  LNQG+W EG +L+
Sbjct: 251  DMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLV 310

Query: 1258 DEMFSAGCEPNVVTYSILMSSLCRNGKLDEAINLLKVMMDNGLKPNSYTFDPLISAFSRE 1079
             EMFS GCEPN VTYSIL+SSLCR G++DEAI++LKVM++  L P++Y++DPLISA  +E
Sbjct: 311  AEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKE 370

Query: 1078 GRVDLAIECLDYMLENGCLPGIVNYNTILSAMCKNGNANGALQVFDKLADLGCPPDVSTY 899
            GR+DLAI  +DYM+ NGCLP IVNYNTIL+A+CKNGNAN AL++F+KL  +GCPP+VS+Y
Sbjct: 371  GRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSY 430

Query: 898  NTMMSALWNTGDRVKALQILSEMITERIDPDEITFNSLISCLCRDGLVDQAIGLLEDMQR 719
            NTM+SALW+ GDR +AL ++  MI++ IDPDEIT+NSLISCLCRDGLV++AIGLL+DM++
Sbjct: 431  NTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQ 490

Query: 718  SGFTPTVITHNIIVLGLCKAHRVDDAIDFLEGMVERGCKPNETTYVLLIEGIGFSGWRAQ 539
            SGF PTVI++NI++LGLCK  R+DDAI     M+E+GC+PNETTY+LLIEGIGF+GWR +
Sbjct: 491  SGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTE 550

Query: 538  AMEIANSLLKMNVISEVAFWRLNKTFPMLDAYKDLSYIEGNK 413
            AME+ANSL   +VIS+ +F RLNKTFPMLD YK+LS  E  K
Sbjct: 551  AMELANSLFSRDVISQDSFKRLNKTFPMLDVYKELSNSETKK 592


>ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223538784|gb|EEF40384.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 584

 Score =  730 bits (1885), Expect = 0.0
 Identities = 340/540 (62%), Positives = 451/540 (83%)
 Frame = -3

Query: 2032 KSKTMEGVELPEGNKTTLLLSNDFKEPHFVKLLNRSCRAGKYDESLYFLECMVNSGFKPD 1853
            K +  + V +    + T +LS DFKE H +KLLNRSCRAGKY+ESLYFLECMV+ G+ PD
Sbjct: 44   KVRNPQKVRVSAETRQTHVLSFDFKEVHLMKLLNRSCRAGKYNESLYFLECMVDKGYTPD 103

Query: 1852 VILCTKLVKGFFHSKKVDKAIRVMEILENYGEPDVFAYNALITGFCKMNNIEAANKVLFR 1673
            VILCTKL+KGFF+S+ + KA RVMEILE YG+PDVFAYNALI+GF K N +E AN+VL R
Sbjct: 104  VILCTKLIKGFFNSRNIGKATRVMEILERYGKPDVFAYNALISGFIKANQLENANRVLDR 163

Query: 1672 MKARGFPPDIVTYNIMIGNLCNRGKLGLAMKVLDQLLQDGVEPSVITYTILIEATILEGG 1493
            MK+RGF PD+VTYNIMIG+ C+RGKL LA+++ ++LL+D  EP+VITYTILIEATIL+GG
Sbjct: 164  MKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGG 223

Query: 1492 LQESMKLFDEMLSRSLQPDMYTYNVLIRGLCREGLMDKAFEFVQRLPDKGCKPDVISYNM 1313
            +  +MKL DEMLS+ L+PD  TYN +IRG+C+E ++DKAFE ++ L  +GCKPD+I+YN+
Sbjct: 224  IDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNI 283

Query: 1312 LLRTLLNQGRWSEGGRLMDEMFSAGCEPNVVTYSILMSSLCRNGKLDEAINLLKVMMDNG 1133
            LLRTLL++G+WSEG +L+ EM S GC+PNVVT+SIL+ +LCR+GK++EA+NLL+ M + G
Sbjct: 284  LLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKG 343

Query: 1132 LKPNSYTFDPLISAFSREGRVDLAIECLDYMLENGCLPGIVNYNTILSAMCKNGNANGAL 953
            LKP++Y +DPLI+ F REGR+DLA E L+YM+ +GCLP IVNYNTI++ +C+ G A+ AL
Sbjct: 344  LKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQAL 403

Query: 952  QVFDKLADLGCPPDVSTYNTMMSALWNTGDRVKALQILSEMITERIDPDEITFNSLISCL 773
            +VF+KL ++GCPP+VS+YNT+ SALW++GDR +AL+++ +++ + IDPDEIT+NSLISCL
Sbjct: 404  EVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCL 463

Query: 772  CRDGLVDQAIGLLEDMQRSGFTPTVITHNIIVLGLCKAHRVDDAIDFLEGMVERGCKPNE 593
            CRDG+VD+AI LL DMQ   + P V+++NII+LGLCK +R +DAI+ L  M E+GC+PNE
Sbjct: 464  CRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNE 523

Query: 592  TTYVLLIEGIGFSGWRAQAMEIANSLLKMNVISEVAFWRLNKTFPMLDAYKDLSYIEGNK 413
            TTY+LLIEGIGFSG RA+AME+ANSL  MN ISE +F RLNKTFP+LD YKDL++ +G+K
Sbjct: 524  TTYILLIEGIGFSGLRAEAMELANSLHGMNAISEDSFNRLNKTFPLLDVYKDLTFSDGSK 583


>ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
            chloroplastic-like [Cucumis sativus]
          Length = 581

 Score =  707 bits (1825), Expect = 0.0
 Identities = 339/537 (63%), Positives = 443/537 (82%), Gaps = 13/537 (2%)
 Frame = -3

Query: 1993 NKTTL---LLSNDFKEPHF----------VKLLNRSCRAGKYDESLYFLECMVNSGFKPD 1853
            NKT L     S +F++PHF          +KLLNRSCRAGK++ESLYFLE +V+ GFKPD
Sbjct: 37   NKTHLRNVTSSAEFRQPHFPNLDNRDAHLMKLLNRSCRAGKHNESLYFLESVVSKGFKPD 96

Query: 1852 VILCTKLVKGFFHSKKVDKAIRVMEILENYGEPDVFAYNALITGFCKMNNIEAANKVLFR 1673
            V+LCTKL+KGFF+S+ + KA+RVMEILE YG+PDV++YNA+I+GF K N I++AN+V  R
Sbjct: 97   VVLCTKLIKGFFNSRNLKKAMRVMEILETYGDPDVYSYNAMISGFSKANQIDSANQVFDR 156

Query: 1672 MKARGFPPDIVTYNIMIGNLCNRGKLGLAMKVLDQLLQDGVEPSVITYTILIEATILEGG 1493
            M++RGF PD+VTYNIMIG+LC+RGKL LA +V+D+LL+DG +PSVITYTILIEATILEG 
Sbjct: 157  MRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATILEGR 216

Query: 1492 LQESMKLFDEMLSRSLQPDMYTYNVLIRGLCREGLMDKAFEFVQRLPDKGCKPDVISYNM 1313
            + E+++LFDE++SR L+PD+YTYN +IRG+C+EG+ D+A +FV+ L  +GC PDV+SYN+
Sbjct: 217  INEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNI 276

Query: 1312 LLRTLLNQGRWSEGGRLMDEMFSAGCEPNVVTYSILMSSLCRNGKLDEAINLLKVMMDNG 1133
            LLR+ LN+ RW +G RLM +M  +GCEPNVVT+SIL+SS CR G++ EA+N+L+VM + G
Sbjct: 277  LLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKG 336

Query: 1132 LKPNSYTFDPLISAFSREGRVDLAIECLDYMLENGCLPGIVNYNTILSAMCKNGNANGAL 953
            L P+SY++DPLISAF +EGR+DLAIE L+ M+ +GCLP IVNYNTIL+ +CK G A+ AL
Sbjct: 337  LTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLAL 396

Query: 952  QVFDKLADLGCPPDVSTYNTMMSALWNTGDRVKALQILSEMITERIDPDEITFNSLISCL 773
             VF+KL ++GCPP V  YNTM SALW+ G+++KAL+++SEMI + IDPDEIT+NSLISCL
Sbjct: 397  DVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCL 456

Query: 772  CRDGLVDQAIGLLEDMQRSGFTPTVITHNIIVLGLCKAHRVDDAIDFLEGMVERGCKPNE 593
            CRDGLVD+AIGLL DM+ + F PTVI+ NI++LG+CKAHRV + I+ L  MVE+GC PNE
Sbjct: 457  CRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNE 516

Query: 592  TTYVLLIEGIGFSGWRAQAMEIANSLLKMNVISEVAFWRLNKTFPMLDAYKDLSYIE 422
            T+YVLLIEGI ++GWRA+AME+ANSL ++ VIS  +  RLNKTFPMLD YK LS  E
Sbjct: 517  TSYVLLIEGIAYAGWRAEAMELANSLYRLGVISGDSSKRLNKTFPMLDVYKGLSLSE 573


>ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297330308|gb|EFH60727.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 598

 Score =  694 bits (1792), Expect = 0.0
 Identities = 319/516 (61%), Positives = 430/516 (83%)
 Frame = -3

Query: 1963 FKEPHFVKLLNRSCRAGKYDESLYFLECMVNSGFKPDVILCTKLVKGFFHSKKVDKAIRV 1784
            F++   +K+ +RSCR+G Y ESL+ LE MV  G+ PDVILCTKL+KGFF  + V KA+RV
Sbjct: 83   FRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRV 142

Query: 1783 MEILENYGEPDVFAYNALITGFCKMNNIEAANKVLFRMKARGFPPDIVTYNIMIGNLCNR 1604
            MEILE +G+PDVFAYNALI GFCKMN I+ A +VL RM+++ F PD VTYNIMIG+LC+R
Sbjct: 143  MEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSR 202

Query: 1603 GKLGLAMKVLDQLLQDGVEPSVITYTILIEATILEGGLQESMKLFDEMLSRSLQPDMYTY 1424
            GKL LA+KVLDQLL D  +P+VITYTILIEAT+LEGG+ E++KL DEMLSR L+PDM+TY
Sbjct: 203  GKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTY 262

Query: 1423 NVLIRGLCREGLMDKAFEFVQRLPDKGCKPDVISYNMLLRTLLNQGRWSEGGRLMDEMFS 1244
            N +IRG+C+EG++D+AFE ++ L  KGC+PDVISYN+LLR LLNQG+W EG +LM +MFS
Sbjct: 263  NTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFS 322

Query: 1243 AGCEPNVVTYSILMSSLCRNGKLDEAINLLKVMMDNGLKPNSYTFDPLISAFSREGRVDL 1064
              C+PNVVTYSIL+++LCR+GK++EA+NLLK+M + GL P++Y++DPLI+AF REGR+D+
Sbjct: 323  EKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDV 382

Query: 1063 AIECLDYMLENGCLPGIVNYNTILSAMCKNGNANGALQVFDKLADLGCPPDVSTYNTMMS 884
            AIE L+ M+ +GCLP IVNYNT+L+ +CKNG A+ AL++F KL ++GC P+ S+YNTM S
Sbjct: 383  AIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFS 442

Query: 883  ALWNTGDRVKALQILSEMITERIDPDEITFNSLISCLCRDGLVDQAIGLLEDMQRSGFTP 704
            ALW++GD+++AL ++ EM++  IDPDEIT+NS+ISCLCR+G+VD+A  LL DM+   F P
Sbjct: 443  ALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHP 502

Query: 703  TVITHNIIVLGLCKAHRVDDAIDFLEGMVERGCKPNETTYVLLIEGIGFSGWRAQAMEIA 524
            +V+T+NI++LG CKAHR++DAID L+ MV  GC+PNETTY +LIEGIGF+G+RA+AME+A
Sbjct: 503  SVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELA 562

Query: 523  NSLLKMNVISEVAFWRLNKTFPMLDAYKDLSYIEGN 416
            N L+++N ISE +F RL++TFP+L+  +  S   G+
Sbjct: 563  NDLVRINAISEYSFKRLHRTFPLLNVLQRSSQTFGH 598