BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00020013
         (835 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285578.1| PREDICTED: DNA-directed RNA polymerase II su...   212   1e-52
ref|XP_003534400.1| PREDICTED: DNA-directed RNA polymerase II su...   211   2e-52
ref|NP_001240124.1| uncharacterized protein LOC100784219 [Glycin...   211   2e-52
ref|XP_004149719.1| PREDICTED: DNA-directed RNA polymerase II su...   210   4e-52
gb|AFK46555.1| unknown [Lotus japonicus]                              208   1e-51

>ref|XP_002285578.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11 [Vitis
           vinifera] gi|296082163|emb|CBI21168.3| unnamed protein
           product [Vitis vinifera]
          Length = 116

 Score =  212 bits (539), Expect = 1e-52
 Identities = 102/116 (87%), Positives = 108/116 (93%)
 Frame = +2

Query: 272 MNAPDRYERFVVPEGVKKVSYERDTKIINAASFTVEREDHTVANILRMQLHSDPNVLFAG 451
           MNAPDRYERFVVPEG KKVSYERDTKIINAASFTVEREDHT+ NILRMQLH D NVLFAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTVEREDHTIGNILRMQLHRDENVLFAG 60

Query: 452 YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKSAFEAEVGKHATIY 619
           YKLPHPLQYKII+RIHTTSQSSPMQAYNQAINDLDKELD+LK+AFE E+ KH+  Y
Sbjct: 61  YKLPHPLQYKIIIRIHTTSQSSPMQAYNQAINDLDKELDYLKNAFEVELAKHSREY 116


>ref|XP_003534400.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11 [Glycine
           max]
          Length = 116

 Score =  211 bits (537), Expect = 2e-52
 Identities = 102/116 (87%), Positives = 109/116 (93%)
 Frame = +2

Query: 272 MNAPDRYERFVVPEGVKKVSYERDTKIINAASFTVEREDHTVANILRMQLHSDPNVLFAG 451
           MNAPDRYERFVVPEG KKVSYERDTKIINAASFT+ERE+HT+ NILRMQLH DPNVLFAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDPNVLFAG 60

Query: 452 YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKSAFEAEVGKHATIY 619
           YKLPHPLQYKIIVRIHTTSQSSPMQAYNQ+INDLD+ELDHLKSAFEAE+ K +  Y
Sbjct: 61  YKLPHPLQYKIIVRIHTTSQSSPMQAYNQSINDLDRELDHLKSAFEAEMLKFSRDY 116


>ref|NP_001240124.1| uncharacterized protein LOC100784219 [Glycine max]
           gi|255626235|gb|ACU13462.1| unknown [Glycine max]
          Length = 116

 Score =  211 bits (536), Expect = 2e-52
 Identities = 101/116 (87%), Positives = 109/116 (93%)
 Frame = +2

Query: 272 MNAPDRYERFVVPEGVKKVSYERDTKIINAASFTVEREDHTVANILRMQLHSDPNVLFAG 451
           MNAPDRYERFVVPEG KKVSYERDTKIINAASFT+ERE+HT+ NILRMQLH DPNVLFAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDPNVLFAG 60

Query: 452 YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKSAFEAEVGKHATIY 619
           YKLPHPLQYKIIVRIHTTSQSSPMQAYNQ++NDLD+ELDHLKSAFEAE+ K +  Y
Sbjct: 61  YKLPHPLQYKIIVRIHTTSQSSPMQAYNQSVNDLDRELDHLKSAFEAEMLKFSRDY 116


>ref|XP_004149719.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11-like
           [Cucumis sativus] gi|449516703|ref|XP_004165386.1|
           PREDICTED: DNA-directed RNA polymerase II subunit
           RPB11-like [Cucumis sativus]
          Length = 116

 Score =  210 bits (534), Expect = 4e-52
 Identities = 102/116 (87%), Positives = 107/116 (92%)
 Frame = +2

Query: 272 MNAPDRYERFVVPEGVKKVSYERDTKIINAASFTVEREDHTVANILRMQLHSDPNVLFAG 451
           MNAPDRYERFVVPEG KKVSYERDTKIINAASFT+ERE+HT+ NILRMQLH D NVLFAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAG 60

Query: 452 YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKSAFEAEVGKHATIY 619
           YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLK+AFEAE  K +  Y
Sbjct: 61  YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKNAFEAEFAKFSRDY 116


>gb|AFK46555.1| unknown [Lotus japonicus]
          Length = 116

 Score =  208 bits (530), Expect = 1e-51
 Identities = 100/116 (86%), Positives = 108/116 (93%)
 Frame = +2

Query: 272 MNAPDRYERFVVPEGVKKVSYERDTKIINAASFTVEREDHTVANILRMQLHSDPNVLFAG 451
           MNAPDRYERFVVPEG KKVSYERDTKIINAASFT+EREDHT+ NILRMQLH DPNVLFAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDPNVLFAG 60

Query: 452 YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKSAFEAEVGKHATIY 619
           YKLPHPLQYKIIVRIHT SQSSPMQAYNQ+INDLDKELDHLK+AFEA++ + +  Y
Sbjct: 61  YKLPHPLQYKIIVRIHTASQSSPMQAYNQSINDLDKELDHLKNAFEADMLRFSRDY 116