BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00019980
         (1117 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282635.1| PREDICTED: putative exosome complex componen...   405   e-110
ref|XP_002318044.1| predicted protein [Populus trichocarpa] gi|1...   394   e-107
ref|XP_003518749.1| PREDICTED: putative exosome complex componen...   382   e-104
ref|XP_003613959.1| Exosome complex exonuclease RRP40 [Medicago ...   380   e-103
ref|XP_004138110.1| PREDICTED: putative exosome complex componen...   373   e-101

>ref|XP_002282635.1| PREDICTED: putative exosome complex component rrp40 [Vitis
           vinifera] gi|297733775|emb|CBI15022.3| unnamed protein
           product [Vitis vinifera]
          Length = 237

 Score =  405 bits (1041), Expect = e-110
 Identities = 199/234 (85%), Positives = 219/234 (93%)
 Frame = +1

Query: 28  NSLSTFIDQTVVPGDVVLDLSKLTNQTIKLGTGLRQDCDSITVMKAGKLRFSKPNKYWVE 207
           N+ ++F+DQ VVPGDVVLDLSK+ NQTIKLG GL QDCD+ITV KAG+LRFSKPNKYWVE
Sbjct: 4   NTPASFVDQLVVPGDVVLDLSKMGNQTIKLGGGLHQDCDAITVTKAGRLRFSKPNKYWVE 63

Query: 208 SSHKRYVPCAGDTILGIVIDSKAENFLVDIKGPTLAFLPVLAFEGGTRRNIPKFEVGALI 387
           SS KRYVPC  DT+LGIV+DSKA+NFLVDIKGP LAFLPVLAFEGGTRRNIPKFE G L+
Sbjct: 64  SSQKRYVPCVEDTVLGIVVDSKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEAGTLL 123

Query: 388 YARVVKANTGMNPELSCMDANGKAAEFGPLKEGFMFESSTGLSRMLLSSPTCPVLDALGK 567
           Y RVVKANTGMNPELSC DA+GKAAEFGPLK+G+MFESSTGLSRMLLSSPTCPVL+ALGK
Sbjct: 124 YVRVVKANTGMNPELSCTDASGKAAEFGPLKDGYMFESSTGLSRMLLSSPTCPVLEALGK 183

Query: 568 KLSFEIAVGLNGRVWVNAASPSSIILVSNAIMNSESLSPVQQKIMVDKLLQRVQ 729
           KLSFEIAVGLNGRVWVNA+SPS++ILV+NAIMNSESLS VQQKIMVDKLLQR+Q
Sbjct: 184 KLSFEIAVGLNGRVWVNASSPSTVILVANAIMNSESLSVVQQKIMVDKLLQRIQ 237


>ref|XP_002318044.1| predicted protein [Populus trichocarpa] gi|118482713|gb|ABK93275.1|
           unknown [Populus trichocarpa]
           gi|222858717|gb|EEE96264.1| predicted protein [Populus
           trichocarpa]
          Length = 242

 Score =  394 bits (1013), Expect = e-107
 Identities = 192/240 (80%), Positives = 219/240 (91%)
 Frame = +1

Query: 10  METRPPNSLSTFIDQTVVPGDVVLDLSKLTNQTIKLGTGLRQDCDSITVMKAGKLRFSKP 189
           ME++   S +TFID  VVPGDVV+DLS +TNQTIKLG+GLRQDCD+I+VMKAGKLRFSKP
Sbjct: 1   MESKSSGSPATFIDNLVVPGDVVVDLSSMTNQTIKLGSGLRQDCDAISVMKAGKLRFSKP 60

Query: 190 NKYWVESSHKRYVPCAGDTILGIVIDSKAENFLVDIKGPTLAFLPVLAFEGGTRRNIPKF 369
           NKYWVE+S KRYVPCA D++LGIV+DSK++NFL+DIKGP LAFLPVLAFEGGTRRNIPKF
Sbjct: 61  NKYWVETSQKRYVPCAEDSVLGIVVDSKSDNFLIDIKGPALAFLPVLAFEGGTRRNIPKF 120

Query: 370 EVGALIYARVVKANTGMNPELSCMDANGKAAEFGPLKEGFMFESSTGLSRMLLSSPTCPV 549
           E G L+Y RVVKAN GMNPELSC DA+GKAAEFG LK+G+MFE STGLSRMLLSSPTCPV
Sbjct: 121 EAGTLLYVRVVKANPGMNPELSCTDASGKAAEFGALKDGYMFECSTGLSRMLLSSPTCPV 180

Query: 550 LDALGKKLSFEIAVGLNGRVWVNAASPSSIILVSNAIMNSESLSPVQQKIMVDKLLQRVQ 729
           L+ALGKKLSFEIAVGLNGRVWVNA SPS +I+V+NAIMNSE+LS VQQKIM +KLLQ++Q
Sbjct: 181 LEALGKKLSFEIAVGLNGRVWVNANSPSIVIIVANAIMNSETLSGVQQKIMAEKLLQKIQ 240


>ref|XP_003518749.1| PREDICTED: putative exosome complex component rrp40-like [Glycine
           max]
          Length = 240

 Score =  382 bits (982), Expect = e-104
 Identities = 185/239 (77%), Positives = 218/239 (91%)
 Frame = +1

Query: 10  METRPPNSLSTFIDQTVVPGDVVLDLSKLTNQTIKLGTGLRQDCDSITVMKAGKLRFSKP 189
           MET+  +S +  +DQ+V PGDV+LDLS +TNQTIKLG GLRQDCD+I+VMKAG+LRFSKP
Sbjct: 1   METKSSSSSTNLVDQSVCPGDVILDLSNMTNQTIKLGGGLRQDCDAISVMKAGRLRFSKP 60

Query: 190 NKYWVESSHKRYVPCAGDTILGIVIDSKAENFLVDIKGPTLAFLPVLAFEGGTRRNIPKF 369
           NKYWVE+S KRYVP A D++LGIV+DS+++NFLVDIKGP LAFLPVLAFEGGTRRNIP+F
Sbjct: 61  NKYWVENSQKRYVPHAEDSVLGIVVDSRSDNFLVDIKGPALAFLPVLAFEGGTRRNIPRF 120

Query: 370 EVGALIYARVVKANTGMNPELSCMDANGKAAEFGPLKEGFMFESSTGLSRMLLSSPTCPV 549
           E+G LIYARVVKAN GMNPEL+C DA+GKAAEFG LK+G+MFE +TGLSRMLLSSPTCPV
Sbjct: 121 EIGTLIYARVVKANPGMNPELACTDASGKAAEFGALKDGYMFECTTGLSRMLLSSPTCPV 180

Query: 550 LDALGKKLSFEIAVGLNGRVWVNAASPSSIILVSNAIMNSESLSPVQQKIMVDKLLQRV 726
           LDALGKKLSFEIAVGLNGRVWV+AASP + I+V+NAIMNSE+LS  QQ+IMV+KLL+R+
Sbjct: 181 LDALGKKLSFEIAVGLNGRVWVSAASPQTTIVVANAIMNSETLSGAQQRIMVEKLLERI 239


>ref|XP_003613959.1| Exosome complex exonuclease RRP40 [Medicago truncatula]
           gi|217074508|gb|ACJ85614.1| unknown [Medicago
           truncatula] gi|355515294|gb|AES96917.1| Exosome complex
           exonuclease RRP40 [Medicago truncatula]
           gi|388510130|gb|AFK43131.1| unknown [Medicago
           truncatula]
          Length = 240

 Score =  380 bits (976), Expect = e-103
 Identities = 190/240 (79%), Positives = 214/240 (89%)
 Frame = +1

Query: 10  METRPPNSLSTFIDQTVVPGDVVLDLSKLTNQTIKLGTGLRQDCDSITVMKAGKLRFSKP 189
           ME++   S + F+DQ V PGDVVLDLS +TNQTIKLG GLRQD D I+VMKAG+LRFSKP
Sbjct: 1   MESKSAGSSTNFVDQLVYPGDVVLDLSTMTNQTIKLGGGLRQDGDVISVMKAGRLRFSKP 60

Query: 190 NKYWVESSHKRYVPCAGDTILGIVIDSKAENFLVDIKGPTLAFLPVLAFEGGTRRNIPKF 369
           NKYWVESS KRYVP A D++LGI++DS+++NFLVDIKGPTLAFLPVLAFEGGTRRNIPKF
Sbjct: 61  NKYWVESSQKRYVPHAEDSVLGIIVDSRSDNFLVDIKGPTLAFLPVLAFEGGTRRNIPKF 120

Query: 370 EVGALIYARVVKANTGMNPELSCMDANGKAAEFGPLKEGFMFESSTGLSRMLLSSPTCPV 549
           EVGALIY RVVKA  GMNPELSC DA+GKA EFG LKEG+MFE STGLSRMLLS+PTCPV
Sbjct: 121 EVGALIYVRVVKAIPGMNPELSCTDASGKAGEFGALKEGYMFECSTGLSRMLLSTPTCPV 180

Query: 550 LDALGKKLSFEIAVGLNGRVWVNAASPSSIILVSNAIMNSESLSPVQQKIMVDKLLQRVQ 729
           LD LGKKLSFEIAVGLNGRVWVNA+SPS+ I+V+NA++NSE LS VQQKIM +KLLQRVQ
Sbjct: 181 LDTLGKKLSFEIAVGLNGRVWVNASSPSTTIIVANALINSEVLSGVQQKIMAEKLLQRVQ 240


>ref|XP_004138110.1| PREDICTED: putative exosome complex component rrp40-like [Cucumis
           sativus] gi|449477413|ref|XP_004155016.1| PREDICTED:
           putative exosome complex component rrp40-like [Cucumis
           sativus]
          Length = 243

 Score =  373 bits (958), Expect = e-101
 Identities = 185/240 (77%), Positives = 213/240 (88%)
 Frame = +1

Query: 10  METRPPNSLSTFIDQTVVPGDVVLDLSKLTNQTIKLGTGLRQDCDSITVMKAGKLRFSKP 189
           M  +P +S ST +DQ VVPGDVVLDLS + N+TIKLG GLRQD D+I+V K GKLRFSKP
Sbjct: 1   MVEKPSSSSSTLVDQPVVPGDVVLDLSNMANETIKLGGGLRQDQDAISVSKVGKLRFSKP 60

Query: 190 NKYWVESSHKRYVPCAGDTILGIVIDSKAENFLVDIKGPTLAFLPVLAFEGGTRRNIPKF 369
           NKYWVESS KRYVPCA D +LGIV+DS+A+NFLVDIKGP+LAFLPVLAFEGGTRRNIPKF
Sbjct: 61  NKYWVESSQKRYVPCAEDCVLGIVLDSRADNFLVDIKGPSLAFLPVLAFEGGTRRNIPKF 120

Query: 370 EVGALIYARVVKANTGMNPELSCMDANGKAAEFGPLKEGFMFESSTGLSRMLLSSPTCPV 549
           E+GAL+Y RVVK N GMNPEL+C DA+GKAA FG LK+G+MFE STGLSRMLLSSP+CPV
Sbjct: 121 EMGALLYVRVVKVNPGMNPELACTDASGKAAGFGLLKDGYMFECSTGLSRMLLSSPSCPV 180

Query: 550 LDALGKKLSFEIAVGLNGRVWVNAASPSSIILVSNAIMNSESLSPVQQKIMVDKLLQRVQ 729
           L++LGKKLSFE AVGLNGRVWVNA SPS+II+VSNAI+NSE+LS VQQ+IMVDKLL  ++
Sbjct: 181 LESLGKKLSFETAVGLNGRVWVNADSPSTIIVVSNAILNSETLSGVQQRIMVDKLLANLK 240