BLASTX nr result

ID: Lithospermum22_contig00019976 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00019976
         (470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513844.1| Auxin response factor, putative [Ricinus com...    64   1e-08
ref|NP_001234237.1| auxin response factor 17 [Solanum lycopersic...    59   4e-07
ref|XP_003601137.1| Auxin response factor [Medicago truncatula] ...    58   7e-07
ref|XP_002527834.1| Auxin response factor, putative [Ricinus com...    58   9e-07
ref|XP_003522594.1| PREDICTED: uncharacterized protein LOC100793...    57   1e-06

>ref|XP_002513844.1| Auxin response factor, putative [Ricinus communis]
           gi|223546930|gb|EEF48427.1| Auxin response factor,
           putative [Ricinus communis]
          Length = 603

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 29/71 (40%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
 Frame = -2

Query: 370 VWRAATGPSVLVPTVGDRVYYFPQGHFEQCXXXXXGLSEAVLTS--LRRSFFHCRMVSVR 197
           +WRA  G SV +PT+  RVYYFPQGH EQ       +S  +L+S  L +    C++ +V+
Sbjct: 18  IWRACAGSSVQIPTINSRVYYFPQGHLEQSSNSSSIVSSCILSSIALSKPVIPCQISAVQ 77

Query: 196 LLFHPVTEQLF 164
            L  PVT++++
Sbjct: 78  FLADPVTDEVY 88


>ref|NP_001234237.1| auxin response factor 17 [Solanum lycopersicum]
           gi|313509556|gb|ADR66030.1| auxin response factor 17
           [Solanum lycopersicum]
          Length = 622

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 31/69 (44%), Positives = 41/69 (59%)
 Frame = -2

Query: 370 VWRAATGPSVLVPTVGDRVYYFPQGHFEQCXXXXXGLSEAVLTSLRRSFFHCRMVSVRLL 191
           VWRA  G SV +P VG RVYYFPQGH E         S AV++    +F  CR++SVR L
Sbjct: 15  VWRAIAGNSVKIPPVGTRVYYFPQGHAEHA----TFTSPAVMSPGMPAFILCRVLSVRFL 70

Query: 190 FHPVTEQLF 164
               T++++
Sbjct: 71  AESDTDEVY 79


>ref|XP_003601137.1| Auxin response factor [Medicago truncatula]
           gi|355490185|gb|AES71388.1| Auxin response factor
           [Medicago truncatula]
          Length = 593

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/69 (40%), Positives = 40/69 (57%)
 Frame = -2

Query: 370 VWRAATGPSVLVPTVGDRVYYFPQGHFEQCXXXXXGLSEAVLTSLRRSFFHCRMVSVRLL 191
           +WRA  G +V +PTV  RVYYFPQGH +Q       LS  +L+   R +  C + +V  L
Sbjct: 20  LWRAIAGAAVQIPTVNSRVYYFPQGHMDQATSLPNNLSPLLLS---RPYILCSVSAVHFL 76

Query: 190 FHPVTEQLF 164
             P T+++F
Sbjct: 77  ADPKTDEVF 85


>ref|XP_002527834.1| Auxin response factor, putative [Ricinus communis]
           gi|223532758|gb|EEF34537.1| Auxin response factor,
           putative [Ricinus communis]
          Length = 620

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
 Frame = -2

Query: 370 VWRAATGPSVLVPTVGDRVYYFPQGHFEQCXXXXXGLSEAVLTSLR-RSFFHCRMVSVRL 194
           +W A  GP V +P  G+RVYYFPQGH EQ        SE  + SL   S   C++++V+ 
Sbjct: 49  LWDACAGPLVTLPREGERVYYFPQGHIEQLGAPIQQQSEHQMASLNLPSKILCKVINVQC 108

Query: 193 LFHPVTEQLF 164
              P+T+Q++
Sbjct: 109 KAEPITDQVY 118


>ref|XP_003522594.1| PREDICTED: uncharacterized protein LOC100793208 [Glycine max]
          Length = 1160

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/70 (40%), Positives = 42/70 (60%)
 Frame = -2

Query: 373 AVWRAATGPSVLVPTVGDRVYYFPQGHFEQCXXXXXGLSEAVLTSLRRSFFHCRMVSVRL 194
           A+W    G +V +PT+  RVYYFPQGHF+Q       LS  +L+   +    CR+ SV+ 
Sbjct: 19  ALWLVCAGTTVEIPTLHSRVYYFPQGHFDQASSAPRNLSPLLLS---KPAVLCRVESVQF 75

Query: 193 LFHPVTEQLF 164
           L  P+T+++F
Sbjct: 76  LADPLTDEVF 85


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