BLASTX nr result
ID: Lithospermum22_contig00019973
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00019973
(1297 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002517770.1| structural maintenance of chromosomes 5 smc5... 429 e-117
ref|XP_002272410.1| PREDICTED: structural maintenance of chromos... 426 e-117
ref|XP_004158182.1| PREDICTED: LOW QUALITY PROTEIN: structural m... 423 e-116
ref|XP_004135946.1| PREDICTED: structural maintenance of chromos... 423 e-116
ref|NP_001056521.1| Os05g0596600 [Oryza sativa Japonica Group] g... 404 e-110
>ref|XP_002517770.1| structural maintenance of chromosomes 5 smc5, putative [Ricinus
communis] gi|223543042|gb|EEF44577.1| structural
maintenance of chromosomes 5 smc5, putative [Ricinus
communis]
Length = 1057
Score = 429 bits (1102), Expect = e-117
Identities = 209/298 (70%), Positives = 257/298 (86%)
Frame = +1
Query: 1 IKDMEENLKHQKKAVEQAKKHYDWCKRESEDRKQRLVIAKERAESIAKLTPILEQAFLEM 180
I+++E NLK +K QA H ++CK+E E+ +Q+L AK AES++ +TP LE+AFLEM
Sbjct: 760 IRELEFNLKQHEKVARQAALHVEYCKKEVEEHRQQLSSAKISAESVSIITPELEKAFLEM 819
Query: 181 PTTVEELEASIEDTISEASSILCLNSSVLQEYENRQRKIDELMTNQEEEERELNKLSDDI 360
PTT+EELEA+I+D +S+A+SIL LN +VL+EYE+RQ+KI+ + E ++ EL + +I
Sbjct: 820 PTTIEELEAAIQDNMSQANSILFLNHNVLEEYEHRQQKIESMTRKLEADKEELKRCLAEI 879
Query: 361 NTLKECWLPTLRNLVAQINKTFSRNFKEMAVAGEVLLDECGMDFDRYGIVIKVKFRQAGQ 540
+ LKE WLPTLRNLVA+IN+TFSRNF+EMAVAGEV LDE DFD+YGI+IKVKFRQAGQ
Sbjct: 880 DDLKESWLPTLRNLVARINETFSRNFQEMAVAGEVSLDEHDKDFDQYGILIKVKFRQAGQ 939
Query: 541 LQVLSAHHQSGGERSVSTILYLVSLQDLTHCPFRVVDEINQGMDPLNERKMFQQLVRAAS 720
LQVLSAHHQSGGERSVST+LYLVSLQDLT+CPFRVVDEINQGMDP+NERKMFQQLVRAAS
Sbjct: 940 LQVLSAHHQSGGERSVSTVLYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAAS 999
Query: 721 QPNTPQCFLLTPKLLPSLEYSEACSILSLMNGPWIEKPSQVWSSGENWRSVMSQMGES 894
QPNTPQCFLLTPKLLP LEYSEACSIL++MNGPWIE+P++VWSSGE+WR+V +GE+
Sbjct: 1000 QPNTPQCFLLTPKLLPDLEYSEACSILNIMNGPWIEQPAKVWSSGESWRAVARLVGET 1057
>ref|XP_002272410.1| PREDICTED: structural maintenance of chromosomes protein 5 [Vitis
vinifera] gi|297736324|emb|CBI24962.3| unnamed protein
product [Vitis vinifera]
Length = 1051
Score = 426 bits (1095), Expect = e-117
Identities = 206/300 (68%), Positives = 257/300 (85%)
Frame = +1
Query: 1 IKDMEENLKHQKKAVEQAKKHYDWCKRESEDRKQRLVIAKERAESIAKLTPILEQAFLEM 180
I+++E +K Q++ QA H++ CK+E ED +Q+L AK AESIA +TP+LE+AFLEM
Sbjct: 752 IRELEVGIKQQERFAMQASLHFENCKKEVEDHRQQLAAAKRHAESIAVITPVLEKAFLEM 811
Query: 181 PTTVEELEASIEDTISEASSILCLNSSVLQEYENRQRKIDELMTNQEEEERELNKLSDDI 360
P T+E+LEA+I+DTIS+A+SIL LN ++L+EYE Q+KI+ + T E +E+EL +I
Sbjct: 812 PATIEDLEAAIQDTISQANSILFLNHNILEEYEECQQKIEAISTKLEADEKELRMYLAEI 871
Query: 361 NTLKECWLPTLRNLVAQINKTFSRNFKEMAVAGEVLLDECGMDFDRYGIVIKVKFRQAGQ 540
+ LKE WL TLRNLVAQIN+TFSRNF++MAVAGEV LDE +DFD++GI+IKVKFRQAG+
Sbjct: 872 DALKENWLTTLRNLVAQINETFSRNFQDMAVAGEVSLDEHDIDFDQFGILIKVKFRQAGE 931
Query: 541 LQVLSAHHQSGGERSVSTILYLVSLQDLTHCPFRVVDEINQGMDPLNERKMFQQLVRAAS 720
LQVLSAHHQSGGERSV+TILYLVSLQDLT+CPFRVVDEINQGMDP+NERKMFQQLVRAAS
Sbjct: 932 LQVLSAHHQSGGERSVATILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAAS 991
Query: 721 QPNTPQCFLLTPKLLPSLEYSEACSILSLMNGPWIEKPSQVWSSGENWRSVMSQMGESHC 900
QPNTPQCFLLTPKLLP LEYSEACSIL++MNGPWIE+PS+VWS+G+ W +V+ +G+S C
Sbjct: 992 QPNTPQCFLLTPKLLPDLEYSEACSILNIMNGPWIEQPSKVWSNGDCWGTVVGLLGKSQC 1051
>ref|XP_004158182.1| PREDICTED: LOW QUALITY PROTEIN: structural maintenance of chromosomes
protein 5-like [Cucumis sativus]
Length = 1053
Score = 423 bits (1087), Expect = e-116
Identities = 207/300 (69%), Positives = 256/300 (85%)
Frame = +1
Query: 1 IKDMEENLKHQKKAVEQAKKHYDWCKRESEDRKQRLVIAKERAESIAKLTPILEQAFLEM 180
I+++E NLK +K QA +++CK+E ED Q+L AK+ AESIA +TP LE+ FLEM
Sbjct: 754 IRELEVNLKQHEKVALQASVQFEYCKKEVEDYLQQLSAAKKYAESIAAITPELEKEFLEM 813
Query: 181 PTTVEELEASIEDTISEASSILCLNSSVLQEYENRQRKIDELMTNQEEEERELNKLSDDI 360
PTT+EELEA+I+D IS+A+SIL LN +VL+EYE+RQR+I+ + E ++ EL K ++
Sbjct: 814 PTTIEELEAAIQDNISQANSILFLNHNVLEEYEHRQRQINIIARKLEADKHELRKCMAEV 873
Query: 361 NTLKECWLPTLRNLVAQINKTFSRNFKEMAVAGEVLLDECGMDFDRYGIVIKVKFRQAGQ 540
+ LK WLPTLR LV+QIN+TFSRNF+EMAVAGEVLLDE MDFD++GI+IKVKFRQ+GQ
Sbjct: 874 DELKGNWLPTLRKLVSQINETFSRNFQEMAVAGEVLLDEHDMDFDQFGILIKVKFRQSGQ 933
Query: 541 LQVLSAHHQSGGERSVSTILYLVSLQDLTHCPFRVVDEINQGMDPLNERKMFQQLVRAAS 720
LQVLSAHHQSGGERSVSTILYLVSLQDLT+CPFRVVDEINQGMDP+NERKMFQQLVRAAS
Sbjct: 934 LQVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAAS 993
Query: 721 QPNTPQCFLLTPKLLPSLEYSEACSILSLMNGPWIEKPSQVWSSGENWRSVMSQMGESHC 900
Q NTPQCFLLTPKLLP LEYSEAC+IL++MNGPWIE+PS+ WS+G++W ++M+ +GES C
Sbjct: 994 QTNTPQCFLLTPKLLPELEYSEACTILNIMNGPWIEQPSRAWSNGDSWGTLMNYVGESRC 1053
>ref|XP_004135946.1| PREDICTED: structural maintenance of chromosomes protein 5-like
[Cucumis sativus]
Length = 1053
Score = 423 bits (1087), Expect = e-116
Identities = 207/300 (69%), Positives = 256/300 (85%)
Frame = +1
Query: 1 IKDMEENLKHQKKAVEQAKKHYDWCKRESEDRKQRLVIAKERAESIAKLTPILEQAFLEM 180
I+++E NLK +K QA +++CK+E ED Q+L AK+ AESIA +TP LE+ FLEM
Sbjct: 754 IRELEVNLKQHEKVALQASVQFEYCKKEVEDYLQQLSAAKKYAESIAAITPELEKEFLEM 813
Query: 181 PTTVEELEASIEDTISEASSILCLNSSVLQEYENRQRKIDELMTNQEEEERELNKLSDDI 360
PTT+EELEA+I+D IS+A+SIL LN +VL+EYE+RQR+I+ + E ++ EL K ++
Sbjct: 814 PTTIEELEAAIQDNISQANSILFLNHNVLEEYEHRQRQINIIARKLEADKHELRKCMAEV 873
Query: 361 NTLKECWLPTLRNLVAQINKTFSRNFKEMAVAGEVLLDECGMDFDRYGIVIKVKFRQAGQ 540
+ LK WLPTLR LV+QIN+TFSRNF+EMAVAGEVLLDE MDFD++GI+IKVKFRQ+GQ
Sbjct: 874 DELKGNWLPTLRKLVSQINETFSRNFQEMAVAGEVLLDEHDMDFDQFGILIKVKFRQSGQ 933
Query: 541 LQVLSAHHQSGGERSVSTILYLVSLQDLTHCPFRVVDEINQGMDPLNERKMFQQLVRAAS 720
LQVLSAHHQSGGERSVSTILYLVSLQDLT+CPFRVVDEINQGMDP+NERKMFQQLVRAAS
Sbjct: 934 LQVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAAS 993
Query: 721 QPNTPQCFLLTPKLLPSLEYSEACSILSLMNGPWIEKPSQVWSSGENWRSVMSQMGESHC 900
Q NTPQCFLLTPKLLP LEYSEAC+IL++MNGPWIE+PS+ WS+G++W ++M+ +GES C
Sbjct: 994 QTNTPQCFLLTPKLLPELEYSEACTILNIMNGPWIEQPSRAWSNGDSWGTLMNYVGESRC 1053
>ref|NP_001056521.1| Os05g0596600 [Oryza sativa Japonica Group] gi|57900674|gb|AAW57799.1|
putative SMC5 protein [Oryza sativa Japonica Group]
gi|113580072|dbj|BAF18435.1| Os05g0596600 [Oryza sativa
Japonica Group] gi|215768112|dbj|BAH00341.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 1065
Score = 404 bits (1039), Expect = e-110
Identities = 199/296 (67%), Positives = 247/296 (83%)
Frame = +1
Query: 1 IKDMEENLKHQKKAVEQAKKHYDWCKRESEDRKQRLVIAKERAESIAKLTPILEQAFLEM 180
I +ME+++K +K +A K Y+ CKR++++ KQ+L AK+ AESIA +T L + FLEM
Sbjct: 769 IWEMEKDVKKLEKNAIEAAKEYENCKRKTQEHKQQLSNAKQHAESIAMITEDLAKKFLEM 828
Query: 181 PTTVEELEASIEDTISEASSILCLNSSVLQEYENRQRKIDELMTNQEEEERELNKLSDDI 360
PTT+EEL+ +I+DT SEA+S+L LN +VL EY++RQR+I+ + E+++ E + DI
Sbjct: 829 PTTIEELDCAIQDTESEANSMLFLNQNVLLEYQSRQREIESISIKLEDDKGECERCYSDI 888
Query: 361 NTLKECWLPTLRNLVAQINKTFSRNFKEMAVAGEVLLDECGMDFDRYGIVIKVKFRQAGQ 540
K WLPTLR LV++IN TFSRNF+EMAVAGEV LDE G+DF++YGI+IKVKFRQ GQ
Sbjct: 889 EATKGKWLPTLRTLVSKINSTFSRNFQEMAVAGEVSLDEHGLDFEQYGILIKVKFRQTGQ 948
Query: 541 LQVLSAHHQSGGERSVSTILYLVSLQDLTHCPFRVVDEINQGMDPLNERKMFQQLVRAAS 720
LQVLSAHHQSGGERSVSTILYLVSLQDLT+CPFRVVDEINQGMDP+NERKMFQQLVRAAS
Sbjct: 949 LQVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAAS 1008
Query: 721 QPNTPQCFLLTPKLLPSLEYSEACSILSLMNGPWIEKPSQVWSSGENWRSVMSQMG 888
QPNTPQCFLLTPKLLP LEYS+ACSIL++MNGPWIEKP++ WS+G+ WR+VMS G
Sbjct: 1009 QPNTPQCFLLTPKLLPDLEYSDACSILNIMNGPWIEKPAKAWSTGDCWRTVMSVSG 1064