BLASTX nr result

ID: Lithospermum22_contig00019959 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00019959
         (1044 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001132376.1| uncharacterized protein LOC100193822 [Zea ma...   175   2e-41
ref|XP_004147534.1| PREDICTED: putative H/ACA ribonucleoprotein ...   174   4e-41
gb|ACG35878.1| h/ACA ribonucleoprotein complex subunit 1-like pr...   173   6e-41
gb|ACG42290.1| h/ACA ribonucleoprotein complex subunit 1-like pr...   172   9e-41
ref|XP_002319696.1| predicted protein [Populus trichocarpa] gi|2...   172   1e-40

>ref|NP_001132376.1| uncharacterized protein LOC100193822 [Zea mays]
           gi|194694218|gb|ACF81193.1| unknown [Zea mays]
          Length = 191

 Score =  175 bits (443), Expect = 2e-41
 Identities = 84/103 (81%), Positives = 91/103 (88%)
 Frame = -1

Query: 828 RDXXXXXXXXXVSSFVHACEGDAVTKLTNEKIPYFNAPIYLQNKTQIGKVDEIFGPINES 649
           RD         VS+FVHACEGDAVTKLTNEK+PYFNAPIYLQNKTQ+GKVDEIFGPINES
Sbjct: 40  RDEGPPAEVVEVSTFVHACEGDAVTKLTNEKVPYFNAPIYLQNKTQVGKVDEIFGPINES 99

Query: 648 FFSVKMMEGIIATSYNSGDKFFIDPAKLLPLARFLPQPKGQAQ 520
           +FSVKMMEGIIATSY  GDKF+IDP KLLPL+RFLPQPKGQ+Q
Sbjct: 100 YFSVKMMEGIIATSYKEGDKFYIDPMKLLPLSRFLPQPKGQSQ 142


>ref|XP_004147534.1| PREDICTED: putative H/ACA ribonucleoprotein complex subunit 1-like
           protein 1-like [Cucumis sativus]
           gi|449484903|ref|XP_004157013.1| PREDICTED: putative
           H/ACA ribonucleoprotein complex subunit 1-like protein
           1-like [Cucumis sativus]
          Length = 194

 Score =  174 bits (440), Expect = 4e-41
 Identities = 84/101 (83%), Positives = 91/101 (90%)
 Frame = -1

Query: 828 RDXXXXXXXXXVSSFVHACEGDAVTKLTNEKIPYFNAPIYLQNKTQIGKVDEIFGPINES 649
           RD         VS+F+HACEGDAVTKLTNEKIP+FNAPIYLQNKTQIGKVDEIFGPINES
Sbjct: 41  RDEGPPSEVVEVSTFLHACEGDAVTKLTNEKIPFFNAPIYLQNKTQIGKVDEIFGPINES 100

Query: 648 FFSVKMMEGIIATSYNSGDKFFIDPAKLLPLARFLPQPKGQ 526
           +FS+KMMEGI+ATSY SGDKF+IDPAKLLPLARFLPQPKGQ
Sbjct: 101 YFSIKMMEGIVATSYASGDKFYIDPAKLLPLARFLPQPKGQ 141


>gb|ACG35878.1| h/ACA ribonucleoprotein complex subunit 1-like protein 1 [Zea mays]
          Length = 196

 Score =  173 bits (439), Expect = 6e-41
 Identities = 83/103 (80%), Positives = 92/103 (89%)
 Frame = -1

Query: 828 RDXXXXXXXXXVSSFVHACEGDAVTKLTNEKIPYFNAPIYLQNKTQIGKVDEIFGPINES 649
           RD         VS+F+HACEG+AVTKLTNEK+PYFNAPIYLQNKTQIGKV+EIFGPINES
Sbjct: 43  RDEGPPAEVVEVSTFLHACEGEAVTKLTNEKVPYFNAPIYLQNKTQIGKVEEIFGPINES 102

Query: 648 FFSVKMMEGIIATSYNSGDKFFIDPAKLLPLARFLPQPKGQAQ 520
           +FSVKMMEGIIATSYN GDKF+IDP KLLPL+RFLPQPKGQ+Q
Sbjct: 103 YFSVKMMEGIIATSYNEGDKFYIDPMKLLPLSRFLPQPKGQSQ 145


>gb|ACG42290.1| h/ACA ribonucleoprotein complex subunit 1-like protein 1 [Zea mays]
          Length = 191

 Score =  172 bits (437), Expect = 9e-41
 Identities = 82/103 (79%), Positives = 91/103 (88%)
 Frame = -1

Query: 828 RDXXXXXXXXXVSSFVHACEGDAVTKLTNEKIPYFNAPIYLQNKTQIGKVDEIFGPINES 649
           RD         VS+F+H+CEGDAVTKLTNEK+PYFNAPIYLQNKTQ+GKVDEIFGPINES
Sbjct: 40  RDEGPPAEVVEVSTFLHSCEGDAVTKLTNEKVPYFNAPIYLQNKTQVGKVDEIFGPINES 99

Query: 648 FFSVKMMEGIIATSYNSGDKFFIDPAKLLPLARFLPQPKGQAQ 520
           +FSVKMMEGIIATSY  GDKF+IDP KLLPL+RFLPQPKGQ+Q
Sbjct: 100 YFSVKMMEGIIATSYKEGDKFYIDPMKLLPLSRFLPQPKGQSQ 142


>ref|XP_002319696.1| predicted protein [Populus trichocarpa] gi|222858072|gb|EEE95619.1|
           predicted protein [Populus trichocarpa]
          Length = 204

 Score =  172 bits (436), Expect = 1e-40
 Identities = 84/103 (81%), Positives = 91/103 (88%)
 Frame = -1

Query: 828 RDXXXXXXXXXVSSFVHACEGDAVTKLTNEKIPYFNAPIYLQNKTQIGKVDEIFGPINES 649
           RD         VSSF+HACEGDAVTKLTNEKIPYFNAPI+LQNKTQIGKVDEIFGPINES
Sbjct: 53  RDEGPPSEVIEVSSFLHACEGDAVTKLTNEKIPYFNAPIFLQNKTQIGKVDEIFGPINES 112

Query: 648 FFSVKMMEGIIATSYNSGDKFFIDPAKLLPLARFLPQPKGQAQ 520
           +FS+KMMEGI+ATSY  GDKF+IDP+KLLPLARFL QPKGQAQ
Sbjct: 113 YFSIKMMEGIVATSYAPGDKFYIDPSKLLPLARFLTQPKGQAQ 155


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