BLASTX nr result

ID: Lithospermum22_contig00019956 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00019956
         (709 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531616.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 hom...    84   3e-14
ref|XP_002527405.1| Protein SEY1, putative [Ricinus communis] gi...    84   3e-14
ref|XP_002327435.1| predicted protein [Populus trichocarpa] gi|2...    84   4e-14
ref|XP_003529864.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 hom...    83   6e-14
ref|XP_002884994.1| hypothetical protein ARALYDRAFT_478791 [Arab...    82   1e-13

>ref|XP_003531616.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 1-like [Glycine
           max]
          Length = 808

 Score = 84.0 bits (206), Expect = 3e-14
 Identities = 40/61 (65%), Positives = 51/61 (83%)
 Frame = +3

Query: 3   VGYLLVKALWVQMDVSNQFRHGALPGILSLSTKFIPAVTDLLRKLAEQGQKSTTGAQKNP 182
           VG+LL+KALWVQ+DVS +FR+GALPGI+SLS+KFIP + +L+RKLAE+GQ     A  NP
Sbjct: 713 VGFLLIKALWVQLDVSGEFRNGALPGIISLSSKFIPTIMNLMRKLAEEGQNP---AANNP 769

Query: 183 Q 185
           Q
Sbjct: 770 Q 770


>ref|XP_002527405.1| Protein SEY1, putative [Ricinus communis]
           gi|223533215|gb|EEF34971.1| Protein SEY1, putative
           [Ricinus communis]
          Length = 813

 Score = 84.0 bits (206), Expect = 3e-14
 Identities = 39/61 (63%), Positives = 53/61 (86%), Gaps = 1/61 (1%)
 Frame = +3

Query: 3   VGYLLVKALWVQMDVSNQFRHGALPGILSLSTKFIPAVTDLLRKLAEQGQK-STTGAQKN 179
           V +LLVKALWVQ+DVS +FR+GALPG++SLSTKF+P + +L++KLAE+GQK +T   Q+N
Sbjct: 713 VVFLLVKALWVQLDVSGEFRNGALPGLISLSTKFLPTIMNLIKKLAEEGQKPATNDPQRN 772

Query: 180 P 182
           P
Sbjct: 773 P 773


>ref|XP_002327435.1| predicted protein [Populus trichocarpa] gi|222835989|gb|EEE74410.1|
           predicted protein [Populus trichocarpa]
          Length = 716

 Score = 83.6 bits (205), Expect = 4e-14
 Identities = 41/87 (47%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
 Frame = +3

Query: 3   VGYLLVKALWVQMDVSNQFRHGALPGILSLSTKFIPAVTDLLRKLAEQGQK-STTGAQKN 179
           VG+LL+KALWVQ+D+S +FR+GALPG+LSLS+KF+P + +LL++LAE+GQK +T   Q+N
Sbjct: 618 VGFLLIKALWVQLDISGEFRNGALPGLLSLSSKFVPTIMNLLKRLAEEGQKPATADPQRN 677

Query: 180 PQXXXXXXXXXXXENQNQHSSPSTHDK 260
                        ++ +  SS  T  K
Sbjct: 678 ATKSFQNGSSSFSDSSSSASSGVTSPK 704


>ref|XP_003529864.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 1-like [Glycine
           max]
          Length = 808

 Score = 82.8 bits (203), Expect = 6e-14
 Identities = 39/61 (63%), Positives = 51/61 (83%)
 Frame = +3

Query: 3   VGYLLVKALWVQMDVSNQFRHGALPGILSLSTKFIPAVTDLLRKLAEQGQKSTTGAQKNP 182
           VG+LL+KALWVQ+DVS +FR+GALPGI+SLS+KFIP + +L++KLAE+GQ     A  NP
Sbjct: 713 VGFLLIKALWVQLDVSGEFRNGALPGIISLSSKFIPTIMNLMKKLAEEGQNP---AANNP 769

Query: 183 Q 185
           Q
Sbjct: 770 Q 770


>ref|XP_002884994.1| hypothetical protein ARALYDRAFT_478791 [Arabidopsis lyrata subsp.
           lyrata] gi|297330834|gb|EFH61253.1| hypothetical protein
           ARALYDRAFT_478791 [Arabidopsis lyrata subsp. lyrata]
          Length = 803

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 40/80 (50%), Positives = 55/80 (68%)
 Frame = +3

Query: 3   VGYLLVKALWVQMDVSNQFRHGALPGILSLSTKFIPAVTDLLRKLAEQGQKSTTGAQKNP 182
           VGYL+ KALWVQ+++S +FR+GALPG+LSLSTKFIP V +LL+KLAE+GQ   T + ++ 
Sbjct: 709 VGYLISKALWVQLNISGEFRNGALPGLLSLSTKFIPTVMNLLKKLAEEGQAPPTNSNQSM 768

Query: 183 QXXXXXXXXXXXENQNQHSS 242
                       E+ +  SS
Sbjct: 769 NSTAQSEVTTNGESSSSSSS 788


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