BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00019950
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi...    57   2e-19
gb|AAT40486.1| putative polyprotein [Solanum demissum]                 54   2e-17
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi...    54   2e-16
emb|CAA72989.1| unnamed protein product [Brassica oleracea var. ...    56   2e-16
gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi...    54   3e-16

>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1496

 Score = 56.6 bits (135), Expect(3) = 2e-19
 Identities = 27/40 (67%), Positives = 31/40 (77%)
 Frame = +2

Query: 2   ECIQTAIFLINRTPSSVLAGKTPYEVLFDRSPSFDLLRVF 121
           E I TA  LINRTPS+VL GKTPYE+LF   PS+D+LR F
Sbjct: 686 ESILTATHLINRTPSAVLKGKTPYELLFGERPSYDMLRSF 725



 Score = 53.1 bits (126), Expect(3) = 2e-19
 Identities = 22/41 (53%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
 Frame = +1

Query: 109 IASF*CLCYVHNKPRQKDKFAPRNRR-LFLGYPFGQKSYKV 228
           + SF CLCY H +PR KDKF  R+R+ +F+GYP G+K+++V
Sbjct: 722 LRSFGCLCYAHIRPRNKDKFTSRSRKCVFIGYPHGKKAWRV 762



 Score = 30.8 bits (68), Expect(3) = 2e-19
 Identities = 13/32 (40%), Positives = 23/32 (71%)
 Frame = +3

Query: 231 ILDLKT*ELFIFRDVRFVENQFPFAGSNDSHL 326
           + DL+T ++F  RDVRF E+ +P+A +  S++
Sbjct: 762 VYDLETGKIFASRDVRFHEDIYPYATATQSNV 793


>gb|AAT40486.1| putative polyprotein [Solanum demissum]
          Length = 1065

 Score = 54.3 bits (129), Expect(3) = 2e-17
 Identities = 25/46 (54%), Positives = 34/46 (73%)
 Frame = +2

Query: 2   ECIQTAIFLINRTPSSVLAGKTPYEVLFDRSPSFDLLRVFDACVMF 139
           E +  A++LINRTP+ +L GKTPYEVLF + PS+  L+VF  C+ F
Sbjct: 527 EYVLPAVYLINRTPTLILNGKTPYEVLFGKEPSYKPLKVF-GCICF 571



 Score = 48.9 bits (115), Expect(3) = 2e-17
 Identities = 20/38 (52%), Positives = 29/38 (76%), Gaps = 1/38 (2%)
 Frame = +1

Query: 118 F*CLCYVHNKPRQKDKFAPRNRR-LFLGYPFGQKSYKV 228
           F C+C+ H K R KDKF  ++R+ +FLGYPFG+K ++V
Sbjct: 566 FGCICFAHLKSRDKDKFGSKSRQCIFLGYPFGKKGWRV 603



 Score = 30.4 bits (67), Expect(3) = 2e-17
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = +3

Query: 231 ILDLKT*ELFIFRDVRFVENQFPFAGS 311
           + DL+T +L++ RDV F E  FP+A S
Sbjct: 603 VYDLETGDLYVSRDVTFDEKIFPYASS 629


>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1501

 Score = 54.3 bits (129), Expect(3) = 2e-16
 Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
 Frame = +2

Query: 2   ECIQTAIFLINRTPSSVLAGKTPYEVLFDRSPSFDLLRVF-DACVMFTIS 148
           E I TA +LINRTPSS+L+G+TPYEVL    P +  LRVF  AC +  ++
Sbjct: 713 ESILTAAYLINRTPSSILSGRTPYEVLHGSKPVYSQLRVFGSACYVHRVT 762



 Score = 45.8 bits (107), Expect(3) = 2e-16
 Identities = 20/34 (58%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
 Frame = +1

Query: 130 CYVHNKPRQKDKFAPRNRR-LFLGYPFGQKSYKV 228
           CYVH   R KDKF  R+R  +F+GYPFG+K +KV
Sbjct: 756 CYVHRVTRDKDKFGQRSRSCIFVGYPFGKKGWKV 789



 Score = 30.0 bits (66), Expect(3) = 2e-16
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +3

Query: 231 ILDLKT*ELFIFRDVRFVENQFPFAGSNDSHL 326
           + D++  E  + RDV F E  FP+AG N S L
Sbjct: 789 VYDIERNEFLVSRDVIFREEVFPYAGVNSSTL 820


>emb|CAA72989.1| unnamed protein product [Brassica oleracea var. acephala]
          Length = 1131

 Score = 55.8 bits (133), Expect(3) = 2e-16
 Identities = 24/40 (60%), Positives = 31/40 (77%)
 Frame = +2

Query: 2   ECIQTAIFLINRTPSSVLAGKTPYEVLFDRSPSFDLLRVF 121
           +C+ TA FLINRTPS +LA K+PYEVL  ++P +D LR F
Sbjct: 702 DCVLTAAFLINRTPSPLLANKSPYEVLMGKAPQYDQLRTF 741



 Score = 48.9 bits (115), Expect(3) = 2e-16
 Identities = 22/42 (52%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
 Frame = +1

Query: 109 IASF*CLCYVHNKPRQKDKFAPRNRR-LFLGYPFGQKSYKVL 231
           + +F CLCY    P+Q+ KF PR+R  +FLGYP G K YK+L
Sbjct: 738 LRTFGCLCYGSTSPKQRHKFMPRSRACVFLGYPSGYKGYKLL 779



 Score = 25.4 bits (54), Expect(3) = 2e-16
 Identities = 11/25 (44%), Positives = 19/25 (76%)
 Frame = +3

Query: 231 ILDLKT*ELFIFRDVRFVENQFPFA 305
           +LDL++ +++I R+V F E+ FP A
Sbjct: 778 LLDLESNKIYISRNVTFHEDIFPMA 802


>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1333

 Score = 54.3 bits (129), Expect(3) = 3e-16
 Identities = 26/40 (65%), Positives = 29/40 (72%)
 Frame = +2

Query: 2   ECIQTAIFLINRTPSSVLAGKTPYEVLFDRSPSFDLLRVF 121
           EC+ TA +LINRTPSSVL   TPYE L  + P FD LRVF
Sbjct: 576 ECVLTAAYLINRTPSSVLNDSTPYERLHKKQPRFDHLRVF 615



 Score = 46.2 bits (108), Expect(3) = 3e-16
 Identities = 21/38 (55%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
 Frame = +1

Query: 118 F*CLCYVHNKPRQKDKFAPRNRR-LFLGYPFGQKSYKV 228
           F  LCY HN+ R  DKFA R+RR +F+GYP GQK +++
Sbjct: 615 FGSLCYAHNRNRGGDKFAERSRRCVFVGYPHGQKGWRL 652



 Score = 28.9 bits (63), Expect(3) = 3e-16
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +3

Query: 231 ILDLKT*ELFIFRDVRFVENQFPFAGSNDSHL 326
           + DL+  E F+ RDV F E +FPF  S++ ++
Sbjct: 652 LFDLEQNEFFVSRDVVFSELEFPFRISHEQNV 683