BLASTX nr result

ID: Lithospermum22_contig00019938 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00019938
         (492 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523259.1| PREDICTED: F-box/kelch-repeat protein SKIP6-...    90   2e-16
emb|CBI21507.3| unnamed protein product [Vitis vinifera]               90   2e-16
ref|XP_002276023.1| PREDICTED: F-box/kelch-repeat protein SKIP6-...    90   2e-16
ref|XP_003526831.1| PREDICTED: F-box/kelch-repeat protein SKIP6-...    84   1e-14
ref|XP_002532272.1| Protein AFR, putative [Ricinus communis] gi|...    83   2e-14

>ref|XP_003523259.1| PREDICTED: F-box/kelch-repeat protein SKIP6-like [Glycine max]
          Length = 359

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 46/91 (50%), Positives = 59/91 (64%)
 Frame = +2

Query: 92  SSSQLIPGLPNDVSLQCLARIPRYEHPIISLVCKSWKSSLHSHALFTTRSLLHISQPFLY 271
           S + LIP LPNDV+L CLARIPR  HP +SLV K  +S L+S  LFTTRSLL  +QP LY
Sbjct: 13  SPNNLIPYLPNDVALNCLARIPRSHHPTLSLVSKPIRSLLYSPLLFTTRSLLQCTQPLLY 72

Query: 272 LNFRIHNNFSWYLLIHKTPTKHVLVKLPSLP 364
           L  R  ++   +  +H+T    +L  LP +P
Sbjct: 73  LTLRSRDSSLQWFTLHRTNPNPLLAPLPPIP 103


>emb|CBI21507.3| unnamed protein product [Vitis vinifera]
          Length = 344

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 45/96 (46%), Positives = 62/96 (64%)
 Frame = +2

Query: 77  TTTQMSSSQLIPGLPNDVSLQCLARIPRYEHPIISLVCKSWKSSLHSHALFTTRSLLHIS 256
           +++  SSS LIP LP+DV+LQC+AR+PR  HP + LVCKSW+S L+S   F+TRSLL+  
Sbjct: 13  SSSSSSSSDLIPNLPDDVALQCIARVPRSRHPHLLLVCKSWRSILNSPDFFSTRSLLNCM 72

Query: 257 QPFLYLNFRIHNNFSWYLLIHKTPTKHVLVKLPSLP 364
           Q  LYL  R++    W++L        +L  LP  P
Sbjct: 73  QHSLYLIVRVNCTLKWFVL---NQNPRILASLPPNP 105


>ref|XP_002276023.1| PREDICTED: F-box/kelch-repeat protein SKIP6-like [Vitis vinifera]
          Length = 361

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 45/96 (46%), Positives = 62/96 (64%)
 Frame = +2

Query: 77  TTTQMSSSQLIPGLPNDVSLQCLARIPRYEHPIISLVCKSWKSSLHSHALFTTRSLLHIS 256
           +++  SSS LIP LP+DV+LQC+AR+PR  HP + LVCKSW+S L+S   F+TRSLL+  
Sbjct: 13  SSSSSSSSDLIPNLPDDVALQCIARVPRSRHPHLLLVCKSWRSILNSPDFFSTRSLLNCM 72

Query: 257 QPFLYLNFRIHNNFSWYLLIHKTPTKHVLVKLPSLP 364
           Q  LYL  R++    W++L        +L  LP  P
Sbjct: 73  QHSLYLIVRVNCTLKWFVL---NQNPRILASLPPNP 105


>ref|XP_003526831.1| PREDICTED: F-box/kelch-repeat protein SKIP6-like [Glycine max]
          Length = 362

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 44/93 (47%), Positives = 60/93 (64%), Gaps = 2/93 (2%)
 Frame = +2

Query: 92  SSSQLIPGLPNDVSLQCLARIPRYEHPIISLVCKSWKSSLHSHALFTTRSLLHISQPFLY 271
           S + LIP LP+DV+L CL RIPR +HP +SLV K  ++ L S  LFTTR+LL  +QP LY
Sbjct: 14  SPNNLIPSLPDDVALNCLGRIPRSQHPTLSLVSKPIRTLLSSPILFTTRTLLQCTQPLLY 73

Query: 272 LNFRI-HNNFSWYLLIHKT-PTKHVLVKLPSLP 364
           L  R  H++   +  +H+T P   +L  LP +P
Sbjct: 74  LTLRSRHSSLLQFFTLHRTNPNNPLLAPLPPIP 106


>ref|XP_002532272.1| Protein AFR, putative [Ricinus communis]
           gi|223528032|gb|EEF30112.1| Protein AFR, putative
           [Ricinus communis]
          Length = 370

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 43/86 (50%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
 Frame = +2

Query: 77  TTTQMSSSQLIPGLPNDVSLQCLARIPRYEHPIISLVCKSWKSSLHSHALFTTRSLLHIS 256
           TTT  +   LIP LP+D+SL  LARIPR  HP++SLV KS+ S   S   + TRSLL+ S
Sbjct: 10  TTTSSNLPLLIPALPDDISLNILARIPRSHHPLLSLVSKSFHSLFSSPLFYATRSLLNFS 69

Query: 257 QPFLYLN--FRIHNNFSWYLLIHKTP 328
           QPFLYL+  F I ++  W+ L   +P
Sbjct: 70  QPFLYLSIRFAITSSLRWFTLYQNSP 95


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