BLASTX nr result

ID: Lithospermum22_contig00019923 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00019923
         (515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-contain...   140   1e-31
ref|XP_002517349.1| DNA binding protein, putative [Ricinus commu...   123   2e-26
ref|XP_004158345.1| PREDICTED: methyl-CpG-binding domain-contain...   121   5e-26
ref|XP_004141185.1| PREDICTED: methyl-CpG-binding domain-contain...   121   5e-26
ref|XP_002525350.1| DNA binding protein, putative [Ricinus commu...   117   7e-25

>ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-containing protein 9-like
           [Vitis vinifera]
          Length = 2164

 Score =  140 bits (352), Expect = 1e-31
 Identities = 77/185 (41%), Positives = 106/185 (57%), Gaps = 28/185 (15%)
 Frame = +2

Query: 38  PVYHAPDGSKFKSMSDVASHLGMRPSCHISETKYGDNGVATMQKGSRTSKKRKEAPGSSR 217
           PV+ APDG  F+SMS+VA +LG+  +C+  +T+   +G A+++K S  SK+RK    S  
Sbjct: 279 PVFCAPDGRIFESMSEVAVYLGLTSNCNSVDTEIRSDGSASLKKRSHLSKRRKSTRLSIA 338

Query: 218 NGSHGQRMXXXXXXXXXXXEILNDQELHSELC---------------------------- 313
           N S   +            +I +D +   ELC                            
Sbjct: 339 NSSAENK---DALLTDFCKDISSDVQ-SMELCASNLGNSVKVTEAAPEENGGTGLQQHNN 394

Query: 314 DFPMQFEDFFLISAGDVDVRPSYHTASQFWPVGYKSSWHDKITGSIFVSEVADGGDEGPL 493
             P+QFEDFF++S G+VDVRPSYH  +Q WPVGYKS WHDK+TGS+F+ +V+DGGD GP+
Sbjct: 395 GLPVQFEDFFVLSLGEVDVRPSYHDVNQLWPVGYKSCWHDKLTGSLFMCDVSDGGDSGPI 454

Query: 494 FKVKR 508
           FKVKR
Sbjct: 455 FKVKR 459


>ref|XP_002517349.1| DNA binding protein, putative [Ricinus communis]
           gi|223543360|gb|EEF44891.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 2145

 Score =  123 bits (308), Expect = 2e-26
 Identities = 69/182 (37%), Positives = 97/182 (53%), Gaps = 21/182 (11%)
 Frame = +2

Query: 29  KTFPVYHAPDGSKFKSMSDVASHLGMRPSCHISETKYGDNGVATMQKGSRTSKKRKEAPG 208
           + F  Y +PDG  F SM++VA +LG+ PS          +G  ++Q+     KKRK    
Sbjct: 301 EVFVAYCSPDGKTFGSMAEVACYLGLTPSTR-------SDGSPSLQERLHLPKKRKTKRF 353

Query: 209 SSRNG-----------------SHGQRMXXXXXXXXXXXEI-LNDQELHSELCD---FPM 325
           S  NG                 S+GQ +           E  + ++++   L      P+
Sbjct: 354 SLANGYAETKQALINGYHKGLLSNGQSIEIGDSKFGKVTEANMEEEDIAKSLPSDEGLPL 413

Query: 326 QFEDFFLISAGDVDVRPSYHTASQFWPVGYKSSWHDKITGSIFVSEVADGGDEGPLFKVK 505
           QFEDFF+IS G +D RPSYH     WPVGY+S WHD++TGS+F+ EV DGGD GP+FKV+
Sbjct: 414 QFEDFFVISLGKIDGRPSYHGPQLIWPVGYRSCWHDRVTGSLFICEVLDGGDSGPIFKVR 473

Query: 506 RY 511
           R+
Sbjct: 474 RF 475


>ref|XP_004158345.1| PREDICTED: methyl-CpG-binding domain-containing protein 9-like
           [Cucumis sativus]
          Length = 1028

 Score =  121 bits (304), Expect = 5e-26
 Identities = 70/182 (38%), Positives = 96/182 (52%), Gaps = 22/182 (12%)
 Frame = +2

Query: 35  FPVYHAPDGSKFKSMSDVASHLGMRPSCHISETKYGDNGVATMQKGSRTSKKRKEAPGSS 214
           + +Y APDG  F S+ +VA HLG+  S    + K    G + +   S   K+RK    S 
Sbjct: 406 YAIYRAPDGKTFGSVYEVACHLGLMSSM---QPKARRQGSSHLSGKSYIPKRRKPTKFSV 462

Query: 215 RNG------------SHGQRMXXXXXXXXXXXEILNDQELHSE--------LC--DFPMQ 328
            NG              G               + N +E  +E         C   FP+Q
Sbjct: 463 ANGFVDNNETLINDRCKGVLCDRQSPSGVTVVNLENSEEAVAEENGGSISSQCYEGFPLQ 522

Query: 329 FEDFFLISAGDVDVRPSYHTASQFWPVGYKSSWHDKITGSIFVSEVADGGDEGPLFKVKR 508
           FEDFF++S G++D RPSYH  ++ +PVG++S WHDK+TGSIF++EV DGGD GPLFKV+R
Sbjct: 523 FEDFFVLSLGEIDARPSYHEVTRVYPVGFRSCWHDKVTGSIFINEVLDGGDSGPLFKVRR 582

Query: 509 YP 514
            P
Sbjct: 583 CP 584


>ref|XP_004141185.1| PREDICTED: methyl-CpG-binding domain-containing protein 9-like
           [Cucumis sativus]
          Length = 2131

 Score =  121 bits (304), Expect = 5e-26
 Identities = 70/182 (38%), Positives = 96/182 (52%), Gaps = 22/182 (12%)
 Frame = +2

Query: 35  FPVYHAPDGSKFKSMSDVASHLGMRPSCHISETKYGDNGVATMQKGSRTSKKRKEAPGSS 214
           + +Y APDG  F S+ +VA HLG+  S    + K    G + +   S   K+RK    S 
Sbjct: 295 YAIYRAPDGKTFGSVYEVACHLGLMSSM---QPKARRQGSSHLSGKSYIPKRRKPTKFSV 351

Query: 215 RNG------------SHGQRMXXXXXXXXXXXEILNDQELHSE--------LC--DFPMQ 328
            NG              G               + N +E  +E         C   FP+Q
Sbjct: 352 ANGFVDNNETLINDRCKGVLCDRQSPSGVTVVNLENSEEAVAEENGGSISSQCYEGFPLQ 411

Query: 329 FEDFFLISAGDVDVRPSYHTASQFWPVGYKSSWHDKITGSIFVSEVADGGDEGPLFKVKR 508
           FEDFF++S G++D RPSYH  ++ +PVG++S WHDK+TGSIF++EV DGGD GPLFKV+R
Sbjct: 412 FEDFFVLSLGEIDARPSYHEVTRVYPVGFRSCWHDKVTGSIFINEVLDGGDSGPLFKVRR 471

Query: 509 YP 514
            P
Sbjct: 472 CP 473


>ref|XP_002525350.1| DNA binding protein, putative [Ricinus communis]
           gi|223535313|gb|EEF36988.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 1794

 Score =  117 bits (294), Expect = 7e-25
 Identities = 48/66 (72%), Positives = 60/66 (90%)
 Frame = +2

Query: 317 FPMQFEDFFLISAGDVDVRPSYHTASQFWPVGYKSSWHDKITGSIFVSEVADGGDEGPLF 496
           FP+QFEDF+++SAG++D RPSYH  SQ WPVGYKSSWHDKITGS+FV +++DGGD GP+F
Sbjct: 64  FPVQFEDFYVLSAGEIDPRPSYHCTSQIWPVGYKSSWHDKITGSLFVCDISDGGDCGPIF 123

Query: 497 KVKRYP 514
           KV+RYP
Sbjct: 124 KVQRYP 129


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