BLASTX nr result

ID: Lithospermum22_contig00019866 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00019866
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312464.1| predicted protein [Populus trichocarpa] gi|2...   125   4e-27
gb|ABK96450.1| unknown [Populus trichocarpa x Populus deltoides]      125   4e-27
ref|XP_002526000.1| cleavage and polyadenylation specificity fac...   120   9e-26
ref|XP_002887158.1| hypothetical protein ARALYDRAFT_475916 [Arab...   115   4e-24
ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261...   114   6e-24

>ref|XP_002312464.1| predicted protein [Populus trichocarpa] gi|222852284|gb|EEE89831.1|
           predicted protein [Populus trichocarpa]
          Length = 351

 Score =  125 bits (314), Expect = 4e-27
 Identities = 63/117 (53%), Positives = 74/117 (63%)
 Frame = +2

Query: 11  PLLLPRQDPPSPXXXXXXXXXXXXXXXXXXXXXXXXSMLVXXXXXXXXXXXXIDWGYSKP 190
           PLL PRQDPP+                         SMLV             DWGYSKP
Sbjct: 10  PLLRPRQDPPTSPTSRQTTLSALLGRATGRRGP---SMLVRETAARELDERRADWGYSKP 66

Query: 191 VVALDMMWNAAFIVVSVVMVGFSLEEKPNVPIRMWVCGYALQCLVHVVLVWVEYRRR 361
           VV+LDMMWNAAF+VVSV M+  +++E+PN PIR+W+CGYALQCLVHVVLVW+EYRRR
Sbjct: 67  VVSLDMMWNAAFVVVSVTMLLVTVKERPNTPIRIWICGYALQCLVHVVLVWLEYRRR 123


>gb|ABK96450.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 218

 Score =  125 bits (314), Expect = 4e-27
 Identities = 63/117 (53%), Positives = 74/117 (63%)
 Frame = +2

Query: 11  PLLLPRQDPPSPXXXXXXXXXXXXXXXXXXXXXXXXSMLVXXXXXXXXXXXXIDWGYSKP 190
           PLL PRQDPP+                         SMLV             DWGYSKP
Sbjct: 10  PLLRPRQDPPTSPTSRQTTLSALLGRATGRRGP---SMLVRETAARELDERRADWGYSKP 66

Query: 191 VVALDMMWNAAFIVVSVVMVGFSLEEKPNVPIRMWVCGYALQCLVHVVLVWVEYRRR 361
           VV+LDMMWNAAF+VVSV M+  +++E+PN PIR+W+CGYALQCLVHVVLVW+EYRRR
Sbjct: 67  VVSLDMMWNAAFVVVSVTMLLVTVKERPNTPIRIWICGYALQCLVHVVLVWLEYRRR 123


>ref|XP_002526000.1| cleavage and polyadenylation specificity factor, putative [Ricinus
           communis] gi|223534732|gb|EEF36424.1| cleavage and
           polyadenylation specificity factor, putative [Ricinus
           communis]
          Length = 963

 Score =  120 bits (302), Expect = 9e-26
 Identities = 54/81 (66%), Positives = 63/81 (77%)
 Frame = +2

Query: 119 SMLVXXXXXXXXXXXXIDWGYSKPVVALDMMWNAAFIVVSVVMVGFSLEEKPNVPIRMWV 298
           SMLV             DWGYSKPVVALDM+WN AF+VVS+ M+  S++EKPN PIR+W+
Sbjct: 642 SMLVRETAALELEERRADWGYSKPVVALDMVWNTAFVVVSITMLILSVKEKPNTPIRIWI 701

Query: 299 CGYALQCLVHVVLVWVEYRRR 361
           CGYALQCLVHVVLVW+EYRRR
Sbjct: 702 CGYALQCLVHVVLVWIEYRRR 722


>ref|XP_002887158.1| hypothetical protein ARALYDRAFT_475916 [Arabidopsis lyrata subsp.
           lyrata] gi|297332999|gb|EFH63417.1| hypothetical protein
           ARALYDRAFT_475916 [Arabidopsis lyrata subsp. lyrata]
          Length = 344

 Score =  115 bits (288), Expect = 4e-24
 Identities = 51/81 (62%), Positives = 63/81 (77%)
 Frame = +2

Query: 119 SMLVXXXXXXXXXXXXIDWGYSKPVVALDMMWNAAFIVVSVVMVGFSLEEKPNVPIRMWV 298
           SM+V             DWGYSKPVVALDM+WN AF+VV++VM+    EEKPNVPIR+W+
Sbjct: 44  SMVVRETAAQELEERRADWGYSKPVVALDMLWNTAFVVVAIVMLLVFKEEKPNVPIRVWI 103

Query: 299 CGYALQCLVHVVLVWVEYRRR 361
           CGYA+QCLVHVVLVW+E+R+R
Sbjct: 104 CGYAIQCLVHVVLVWLEFRKR 124


>ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261060 [Vitis vinifera]
          Length = 2299

 Score =  114 bits (286), Expect = 6e-24
 Identities = 59/120 (49%), Positives = 69/120 (57%)
 Frame = +2

Query: 2    TTVPLLLPRQDPPSPXXXXXXXXXXXXXXXXXXXXXXXXSMLVXXXXXXXXXXXXIDWGY 181
            TT PLL PRQ                             SMLV             DWGY
Sbjct: 1954 TTAPLLRPRQGTAEQSARPTTLALLMGRATGRRGP----SMLVRETAARELEERRADWGY 2009

Query: 182  SKPVVALDMMWNAAFIVVSVVMVGFSLEEKPNVPIRMWVCGYALQCLVHVVLVWVEYRRR 361
            SKPVVALDMMWN +F++VS+VM+  +  E+PN PIR+W+CGYALQC VHVVLVW+EYRRR
Sbjct: 2010 SKPVVALDMMWNMSFVIVSIVMLICTARERPNTPIRLWICGYALQCGVHVVLVWLEYRRR 2069


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