BLASTX nr result

ID: Lithospermum22_contig00019843 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00019843
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA86386.1| transcription factor [Nicotiana tabacum]              136   2e-30
ref|XP_002328241.1| transcription factor E2F [Populus trichocarp...   133   1e-29
emb|CAC17702.1| transcription factor (E2F) [Chenopodium rubrum]       133   2e-29
ref|XP_002312830.1| transcription factor E2F [Populus trichocarp...   130   1e-28
ref|XP_002275458.2| PREDICTED: transcription factor E2FA [Vitis ...   129   3e-28

>dbj|BAA86386.1| transcription factor [Nicotiana tabacum]
          Length = 439

 Score =  136 bits (343), Expect = 2e-30
 Identities = 73/120 (60%), Positives = 89/120 (74%), Gaps = 1/120 (0%)
 Frame = +1

Query: 1   LEVPDPDVTIDYPHQRRYKIVLRSTMGPIDVYLVSQFEEKFEEINAPEPPTSDPPMNIDT 180
           LEVPDPD  +DYP QRRY+IVLRSTMGPIDVYLVSQFEEKFEEINA E P++ P  +   
Sbjct: 267 LEVPDPDEAVDYP-QRRYRIVLRSTMGPIDVYLVSQFEEKFEEINAVEAPSAMP--STSG 323

Query: 181 GNPAETVEDPDPGNGGHTNGMLQQKDNET-CGDLSTSNDFVSGIMKIVPDVNSDADYWLL 357
            N  +T   P   NGG  +G + +K+N++ C D+ TS DF SGIMKIV DV+++ DYWLL
Sbjct: 324 FNENDTATLPTEENGG-VDGRIDEKENQSVCADVGTSQDFASGIMKIVSDVDNEEDYWLL 382


>ref|XP_002328241.1| transcription factor E2F [Populus trichocarpa]
           gi|222837756|gb|EEE76121.1| transcription factor E2F
           [Populus trichocarpa]
          Length = 455

 Score =  133 bits (335), Expect = 1e-29
 Identities = 73/120 (60%), Positives = 87/120 (72%), Gaps = 1/120 (0%)
 Frame = +1

Query: 1   LEVPDPDVTIDYPHQRRYKIVLRSTMGPIDVYLVSQFEEKFEEINAPEPPTSDPPMNIDT 180
           LEVPDPD  +DYP QRRY+IVLRSTMGPIDVYLVSQFEEK E+I   EPP S P  +   
Sbjct: 281 LEVPDPDEAVDYP-QRRYRIVLRSTMGPIDVYLVSQFEEKIEDIQGVEPPPSYPSTSGFN 339

Query: 181 GNPAETVEDPDPGNGGHTNGMLQQKDNETCGDLSTSNDFVSGIMKIVP-DVNSDADYWLL 357
            NPA T+   +  + G    M +Q  +  C +L+T++DFVSGIMKIVP DV+SDADYWLL
Sbjct: 340 ENPATTMTMEE--SRGKEVEMQEQDGHRMCSELNTAHDFVSGIMKIVPSDVDSDADYWLL 397


>emb|CAC17702.1| transcription factor (E2F) [Chenopodium rubrum]
          Length = 454

 Score =  133 bits (334), Expect = 2e-29
 Identities = 71/119 (59%), Positives = 81/119 (68%)
 Frame = +1

Query: 1   LEVPDPDVTIDYPHQRRYKIVLRSTMGPIDVYLVSQFEEKFEEINAPEPPTSDPPMNIDT 180
           LEVPDPD  +DYP QRRY+IVLRSTMGPIDVYLVSQFEEKFEEI+  EPP S P     +
Sbjct: 283 LEVPDPDEAVDYP-QRRYRIVLRSTMGPIDVYLVSQFEEKFEEISGAEPPPSIPS---TS 338

Query: 181 GNPAETVEDPDPGNGGHTNGMLQQKDNETCGDLSTSNDFVSGIMKIVPDVNSDADYWLL 357
           G   +T       N      M  Q+ +  C D +   DFVSGIMKIVP+V+SDADYWLL
Sbjct: 339 GYNEDTTTAAKEENRDDETKMQGQETHRICSDANAQQDFVSGIMKIVPEVDSDADYWLL 397


>ref|XP_002312830.1| transcription factor E2F [Populus trichocarpa]
           gi|222849238|gb|EEE86785.1| transcription factor E2F
           [Populus trichocarpa]
          Length = 473

 Score =  130 bits (327), Expect = 1e-28
 Identities = 72/120 (60%), Positives = 84/120 (70%), Gaps = 1/120 (0%)
 Frame = +1

Query: 1   LEVPDPDVTIDYPHQRRYKIVLRSTMGPIDVYLVSQFEEKFEEINAPEPPTSDPPMNIDT 180
           LEVPDPD  +DYP QRRY+IV RSTMGPIDVYLVSQFEEKFE+I   EPP SD   +   
Sbjct: 300 LEVPDPDEAVDYP-QRRYRIVFRSTMGPIDVYLVSQFEEKFEDIQGAEPPPSDSSTSGFN 358

Query: 181 GNPAETVEDPDPGNGGHTNGMLQQKDNETCGDLSTSNDFVSGIMKIVP-DVNSDADYWLL 357
            N A T+   +  +      M +Q  +  C + +TS+DFVSGIMKIVP DVNSDADYWLL
Sbjct: 359 ENAATTMVTEE--SRAKEFEMQEQDGHRICSEPNTSHDFVSGIMKIVPSDVNSDADYWLL 416


>ref|XP_002275458.2| PREDICTED: transcription factor E2FA [Vitis vinifera]
          Length = 498

 Score =  129 bits (323), Expect = 3e-28
 Identities = 68/118 (57%), Positives = 80/118 (67%)
 Frame = +1

Query: 1   LEVPDPDVTIDYPHQRRYKIVLRSTMGPIDVYLVSQFEEKFEEINAPEPPTSDPPMNIDT 180
           LEVPDPD  +DYP QRRY+IVLRSTMGPIDVYLVSQFEEKFEE+N   PP S P  +   
Sbjct: 292 LEVPDPDEAVDYP-QRRYRIVLRSTMGPIDVYLVSQFEEKFEEMNGTPPPLSFPLASSSG 350

Query: 181 GNPAETVEDPDPGNGGHTNGMLQQKDNETCGDLSTSNDFVSGIMKIVPDVNSDADYWL 354
            N   + E     + G    +  Q   + C DL+ S +F+ GIMKIVPDV+SDADYWL
Sbjct: 351 SNENPSTEVVIADSSG--KELEPQDGYQMCSDLTASQEFIGGIMKIVPDVDSDADYWL 406


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