BLASTX nr result

ID: Lithospermum22_contig00019758 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00019758
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD17395.1| putative non-LTR retroelement reverse transcripta...    79   5e-13
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    78   6e-13
emb|CAN71438.1| hypothetical protein VITISV_011330 [Vitis vinifera]    76   2e-12
pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW1...    75   5e-12
dbj|BAM28750.1| reverse transcriptase-like protein, partial [Cam...    75   7e-12

>gb|AAD17395.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1138

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 34/60 (56%), Positives = 43/60 (71%)
 Frame = -1

Query: 365 EEGGLGFRKTQDFNNALLCKQAWRLLTYPNSTLARTYKARYFPNGSFLTAELGTKPSYTC 186
           E GGLGFR  + FN ALL KQ+WR+L YP+   AR +K+RYF +  FL A+LG +PSY C
Sbjct: 625 ESGGLGFRDIESFNQALLAKQSWRILQYPSFLFARFFKSRYFDDEEFLEADLGVRPSYAC 684


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 36/58 (62%), Positives = 43/58 (74%)
 Frame = -1

Query: 365 EEGGLGFRKTQDFNNALLCKQAWRLLTYPNSTLARTYKARYFPNGSFLTAELGTKPSY 192
           ++GGLGFRK  DFN ALL KQ WR L  P+S + R ++ARYF N SFL AELG+ PSY
Sbjct: 317 KDGGLGFRKLXDFNLALLAKQGWRFLRNPDSLVTRIFQARYFRNSSFLNAELGSNPSY 374


>emb|CAN71438.1| hypothetical protein VITISV_011330 [Vitis vinifera]
          Length = 1484

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 35/59 (59%), Positives = 44/59 (74%)
 Frame = -1

Query: 365 EEGGLGFRKTQDFNNALLCKQAWRLLTYPNSTLARTYKARYFPNGSFLTAELGTKPSYT 189
           EEGGLGFR  +DFN A+L KQ W L+T P+S +AR  KARY+ +G FL+A LG  PS+T
Sbjct: 370 EEGGLGFRNXRDFNLAMLGKQGWNLITKPDSLIARLLKARYYRSGDFLSARLGHNPSFT 428


>pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW15) - Arabidopsis
            thaliana retrotransposon Ta11-1 gi|976278|gb|AAA75254.1|
            reverse transcriptase [Arabidopsis thaliana]
          Length = 1333

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 35/58 (60%), Positives = 40/58 (68%)
 Frame = -1

Query: 365  EEGGLGFRKTQDFNNALLCKQAWRLLTYPNSTLARTYKARYFPNGSFLTAELGTKPSY 192
            E GGLGFR  + FN ALL KQAWRLL +PNS  AR +K+RY+    FL AEL   PSY
Sbjct: 851  ENGGLGFRDIESFNQALLAKQAWRLLQFPNSLFARFFKSRYYDEEDFLDAELKATPSY 908


>dbj|BAM28750.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
           sinensis]
          Length = 255

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 34/58 (58%), Positives = 43/58 (74%)
 Frame = -1

Query: 362 EGGLGFRKTQDFNNALLCKQAWRLLTYPNSTLARTYKARYFPNGSFLTAELGTKPSYT 189
           +GG+GFR  Q FN+ALL KQ WRL+  P S +AR +KARYFP  SFL A +G+ PS+T
Sbjct: 99  QGGMGFRCLQXFNSALLAKQCWRLVQRPQSLVARVFKARYFPQTSFLDALVGSNPSFT 156


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