BLASTX nr result

ID: Lithospermum22_contig00019634 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00019634
         (1245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523285.1| PREDICTED: putative transcription elongation...   219   9e-55
gb|ACU19168.1| unknown [Glycine max]                                  218   3e-54
ref|XP_003526795.1| PREDICTED: transcription elongation factor A...   217   4e-54
gb|ACU20825.1| unknown [Glycine max]                                  214   5e-53
dbj|BAJ34462.1| unnamed protein product [Thellungiella halophila]     204   3e-50

>ref|XP_003523285.1| PREDICTED: putative transcription elongation factor S-II-like
            [Glycine max]
          Length = 368

 Score =  219 bits (559), Expect = 9e-55
 Identities = 137/344 (39%), Positives = 193/344 (56%), Gaps = 1/344 (0%)
 Frame = +1

Query: 208  MEKELIHLFEGVQKAADALVDDIGP-EEDRALDLLNQLKKFPVNYHVLVSTQVGKRLRAL 384
            MEKEL+ L+E  +KAADA +   G  EE R +D L QLKKFPVNY +LV+TQVGK L+ L
Sbjct: 1    MEKELVELYEAAKKAADAAISGDGKHEESRCIDALEQLKKFPVNYKILVNTQVGKHLKVL 60

Query: 385  TKHHSCRIKVLASEVVEIWKDVIVQETARNRTDGAAKDEGSVKVGAVKVERMPLVKSRKD 564
            TKH   +IK  A +++EIWK +I++ET++N+  G+                        D
Sbjct: 61   TKHPRLKIKAFAIDLIEIWKGIIIKETSKNKNGGS------------------------D 96

Query: 565  NPAYTNNYKKIKIGGHNKRMKTELDAVKTEKGPVAALQIKVQKTITEDDQNFRSLEQIKE 744
            +   + N +K K G   K       +VK EKG      +KV+K I  +     S E +K+
Sbjct: 97   SKVESANGEKSKAGKMQKS-----PSVKVEKGET----VKVEK-IDRNGTTKSSSENMKK 146

Query: 745  ERTCIEXXXXXXXXXXXXXEMYAVKTEERLAAEQIKVEKVTAEDERSLDQTEENKATYAM 924
             +                     VK E+   +  +KVEK+ A++E+ +   ++  ++ A 
Sbjct: 147  VQN-------------------DVKNEKTDRSASVKVEKI-AKEEKPVSGAKKMSSSSA- 185

Query: 925  SHNRKQDQVTPPKLDSIVYCNDPMRNKIREMLAEALCKVSREVDKDLEDAVNRCDPYRVA 1104
                      PPKL +++  ND  R+KIRE+L EAL KV+ E D+DL D VN  DP RVA
Sbjct: 186  ---------APPKLKTMIKSNDATRDKIREILHEALSKVTGEADEDLVDVVNNSDPIRVA 236

Query: 1105 VSVETAMFEKWGKTNCAHKLKYRSIIFNMKDQKNPDFRRKVLFG 1236
            V+VE+ +FEKWG +N A K+KYRS++FN+KD  NPDFRRKVL G
Sbjct: 237  VTVESVLFEKWGPSNGAQKVKYRSLMFNLKDSNNPDFRRKVLLG 280


>gb|ACU19168.1| unknown [Glycine max]
          Length = 368

 Score =  218 bits (555), Expect = 3e-54
 Identities = 136/344 (39%), Positives = 192/344 (55%), Gaps = 1/344 (0%)
 Frame = +1

Query: 208  MEKELIHLFEGVQKAADALVDDIGP-EEDRALDLLNQLKKFPVNYHVLVSTQVGKRLRAL 384
            MEKEL+ L+E  +KAADA +   G  EE R +D   QLKKFPVNY +LV+TQVGK L+ L
Sbjct: 1    MEKELVELYEAAKKAADAAISGDGKHEESRCIDAFEQLKKFPVNYKILVNTQVGKHLKVL 60

Query: 385  TKHHSCRIKVLASEVVEIWKDVIVQETARNRTDGAAKDEGSVKVGAVKVERMPLVKSRKD 564
            TKH   +IK  A +++EIWK +I++ET++N+  G+                        D
Sbjct: 61   TKHPRLKIKAFAIDLIEIWKGIIIKETSKNKNGGS------------------------D 96

Query: 565  NPAYTNNYKKIKIGGHNKRMKTELDAVKTEKGPVAALQIKVQKTITEDDQNFRSLEQIKE 744
            +   + N +K K G   K       +VK EKG      +KV+K I  +     S E +K+
Sbjct: 97   SKVESANGEKSKAGKMQKS-----PSVKVEKGET----VKVEK-IDRNGTTKSSSENMKK 146

Query: 745  ERTCIEXXXXXXXXXXXXXEMYAVKTEERLAAEQIKVEKVTAEDERSLDQTEENKATYAM 924
             +                     VK E+   +  +KVEK+ A++E+ +   ++  ++ A 
Sbjct: 147  VQN-------------------DVKNEKTDRSASVKVEKI-AKEEKPVSGAKKMSSSSA- 185

Query: 925  SHNRKQDQVTPPKLDSIVYCNDPMRNKIREMLAEALCKVSREVDKDLEDAVNRCDPYRVA 1104
                      PPKL +++  ND  R+KIRE+L EAL KV+ E D+DL D VN  DP RVA
Sbjct: 186  ---------APPKLKTMIKSNDATRDKIREILHEALSKVTGEADEDLVDVVNNSDPIRVA 236

Query: 1105 VSVETAMFEKWGKTNCAHKLKYRSIIFNMKDQKNPDFRRKVLFG 1236
            V+VE+ +FEKWG +N A K+KYRS++FN+KD  NPDFRRKVL G
Sbjct: 237  VTVESVLFEKWGPSNGAQKVKYRSLMFNLKDSNNPDFRRKVLLG 280


>ref|XP_003526795.1| PREDICTED: transcription elongation factor A protein 2-like [Glycine
            max]
          Length = 367

 Score =  217 bits (553), Expect = 4e-54
 Identities = 135/345 (39%), Positives = 192/345 (55%), Gaps = 2/345 (0%)
 Frame = +1

Query: 208  MEKELIHLFEGVQKAADALVDDIGP-EEDRALDLLNQLKKFPVNYHVLVSTQVGKRLRAL 384
            MEKEL+ L+E  +KAADA +   G  EE R +D L QLKKFPVNY +LV+TQVGK L+ L
Sbjct: 1    MEKELVELYEAAKKAADAAISGDGEHEESRCIDALEQLKKFPVNYKILVNTQVGKHLKVL 60

Query: 385  TKHHSCRIKVLASEVVEIWKDVIVQETARNRTDGA-AKDEGSVKVGAVKVERMPLVKSRK 561
            TKH   +IK  A +++EIWK +I++ET++N+  G+ +KDE +                  
Sbjct: 61   TKHPRQKIKSFAIDLIEIWKGIIIKETSKNKNGGSDSKDESA------------------ 102

Query: 562  DNPAYTNNYKKIKIGGHNKRMKTELDAVKTEKGPVAALQIKVQKTITEDDQNFRSLEQIK 741
                   N +K K G   K       +VK EKG    ++ K+++  T    +F ++++++
Sbjct: 103  -------NREKSKAGKMQKS-----PSVKIEKGETVKVE-KIERNGTSKS-SFENMKKVQ 148

Query: 742  EERTCIEXXXXXXXXXXXXXEMYAVKTEERLAAEQIKVEKVTAEDERSLDQTEENKATYA 921
             +                      VK E    A  +K+EK+  E   S  +   + +T  
Sbjct: 149  ND----------------------VKNERTDRAASVKMEKIAEEKPISGAKKMSSSST-- 184

Query: 922  MSHNRKQDQVTPPKLDSIVYCNDPMRNKIREMLAEALCKVSREVDKDLEDAVNRCDPYRV 1101
                       PPKL +++  ND  R+KIRE+L EAL KV+RE D+DL   VN  DP RV
Sbjct: 185  ----------APPKLKTMIKSNDATRDKIREILHEALSKVTREADEDLVAVVNDSDPIRV 234

Query: 1102 AVSVETAMFEKWGKTNCAHKLKYRSIIFNMKDQKNPDFRRKVLFG 1236
            AV+VE+ +FEKWG +N A K+KYRS++FN+KD  NPDFRRKVL G
Sbjct: 235  AVTVESVLFEKWGPSNGAQKVKYRSLMFNLKDSNNPDFRRKVLLG 279


>gb|ACU20825.1| unknown [Glycine max]
          Length = 350

 Score =  214 bits (544), Expect = 5e-53
 Identities = 133/345 (38%), Positives = 191/345 (55%), Gaps = 2/345 (0%)
 Frame = +1

Query: 208  MEKELIHLFEGVQKAADALVDDIGP-EEDRALDLLNQLKKFPVNYHVLVSTQVGKRLRAL 384
            MEKEL+ L+E  +KAADA +   G  EE R +D L QLKKFPVNY +LV+TQVGK L+ L
Sbjct: 1    MEKELVELYEAAKKAADAAISGDGEHEESRCIDALEQLKKFPVNYKILVNTQVGKHLKVL 60

Query: 385  TKHHSCRIKVLASEVVEIWKDVIVQETARNRTDGA-AKDEGSVKVGAVKVERMPLVKSRK 561
            TKH   +IK  A +++EIWK +I++ET +N+  G+ +KDE +                  
Sbjct: 61   TKHPRQKIKSFAIDLIEIWKGIIIKETGKNKNGGSDSKDESA------------------ 102

Query: 562  DNPAYTNNYKKIKIGGHNKRMKTELDAVKTEKGPVAALQIKVQKTITEDDQNFRSLEQIK 741
                   N +K K G   K       +VK EKG    ++ K+++  T    +F ++++++
Sbjct: 103  -------NREKSKAGKMQKS-----PSVKIEKGETVKVE-KIERNGTSKS-SFENMKKVQ 148

Query: 742  EERTCIEXXXXXXXXXXXXXEMYAVKTEERLAAEQIKVEKVTAEDERSLDQTEENKATYA 921
             +                      VK E    A  +K+EK+  E   S  +   + +T  
Sbjct: 149  ND----------------------VKNERTDRAASVKMEKIAEEKPISGAKKMSSSST-- 184

Query: 922  MSHNRKQDQVTPPKLDSIVYCNDPMRNKIREMLAEALCKVSREVDKDLEDAVNRCDPYRV 1101
                       PPKL +++  +D  R+KI+E+L EAL KV+RE D+DL   VN  DP RV
Sbjct: 185  ----------APPKLKTMIKSSDATRDKIKEILHEALSKVTREADEDLVAVVNDSDPIRV 234

Query: 1102 AVSVETAMFEKWGKTNCAHKLKYRSIIFNMKDQKNPDFRRKVLFG 1236
            AV+VE+ +FEKWG +N A K+KYRS++FN+KD  NPDFRRKVL G
Sbjct: 235  AVTVESVLFEKWGPSNGAQKVKYRSLMFNLKDSNNPDFRRKVLLG 279


>dbj|BAJ34462.1| unnamed protein product [Thellungiella halophila]
          Length = 381

 Score =  204 bits (520), Expect = 3e-50
 Identities = 138/348 (39%), Positives = 192/348 (55%), Gaps = 4/348 (1%)
 Frame = +1

Query: 208  MEKELIHLFEGVQKAADAL----VDDIGPEEDRALDLLNQLKKFPVNYHVLVSTQVGKRL 375
            ME ELI LFEG +KAADA     V   GPE  + LD L QLKKFPV Y  LV+TQVGK+L
Sbjct: 1    METELIELFEGAKKAADAAALDGVTSSGPEISQCLDALKQLKKFPVTYDTLVATQVGKKL 60

Query: 376  RALTKHHSCRIKVLASEVVEIWKDVIVQETARNRTDGAAKDEGSVKVGAVKVERMPLVKS 555
            R+L+KH    IK +A++++EIWK V+++ET++ +  G+     S      K++R  +   
Sbjct: 61   RSLSKHPVEEIKSVATDLLEIWKKVVIEETSKAKKIGSTNGVKSETAKDGKIDRKDV--E 118

Query: 556  RKDNPAYTNNYKKIKIGGHNKRMKTELDAVKTEKGPVAALQIKVQKTITEDDQNFRSLEQ 735
            R  NPA     +K++ G   K +K E      +K P   +  K+++   ++  N      
Sbjct: 119  RTSNPAPVK-VQKLQRGDSAKSIKVE------KKEPDNKVGAKIERKEQDNKVNT----- 166

Query: 736  IKEERTCIEXXXXXXXXXXXXXEMYAVKTEERLAAEQIKVEKVTAEDERSLDQTEENKAT 915
                                       K + R   + +K EKV+ E++ S       KA 
Sbjct: 167  -------------------------GAKLDHR--GQTVKDEKVSKENQSS------TKAP 193

Query: 916  YAMSHNRKQDQVTPPKLDSIVYCNDPMRNKIREMLAEALCKVSREVDKDLEDAVNRCDPY 1095
             A S N       PPKL S++ CNDP+R+KIREML EAL +V  E D+   + VN CDP+
Sbjct: 194  -AKSPN------APPKLTSMLKCNDPVRDKIREMLVEALSRVHGESDEYDREKVNGCDPF 246

Query: 1096 RVAVSVETAMFEKWGKTNCAHKLKYRSIIFNMKDQKNPDFRRKVLFGQ 1239
            RVAVSVE+ MFEK G++  A K KYRSI+FN++D  NPD RR+VL G+
Sbjct: 247  RVAVSVESHMFEKLGRSTGAEKAKYRSIMFNLRDSNNPDLRRRVLTGE 294


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