BLASTX nr result

ID: Lithospermum22_contig00019583 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00019583
         (230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17573.3| unnamed protein product [Vitis vinifera]              127   1e-27
ref|XP_004146528.1| PREDICTED: general transcription factor IIE ...   123   2e-26
ref|XP_002299546.1| predicted protein [Populus trichocarpa] gi|2...   122   2e-26
ref|XP_002283557.1| PREDICTED: general transcription factor IIE ...   122   3e-26
ref|XP_002509755.1| Transcription initiation factor IIE subunit ...   119   3e-25

>emb|CBI17573.3| unnamed protein product [Vitis vinifera]
          Length = 178

 Score =  127 bits (318), Expect = 1e-27
 Identities = 62/76 (81%), Positives = 66/76 (86%)
 Frame = +2

Query: 2   IKRVIDLLFENRKAFTPEQINEVCYVDILANKGVFDSLKNNLKVRYDGNRFSYKSKHALK 181
           IKRVIDLL E R+AFTPEQINE CYVD+ ANK VFDSL+NN KV YDG RFSYKSKH LK
Sbjct: 76  IKRVIDLLLETRQAFTPEQINEACYVDMTANKAVFDSLRNNPKVNYDGKRFSYKSKHDLK 135

Query: 182 NKDQLLVLIRKFPEGI 229
           +K QLLVLIRKFPEGI
Sbjct: 136 DKSQLLVLIRKFPEGI 151


>ref|XP_004146528.1| PREDICTED: general transcription factor IIE subunit 2-like [Cucumis
           sativus] gi|449499921|ref|XP_004160955.1| PREDICTED:
           general transcription factor IIE subunit 2-like [Cucumis
           sativus]
          Length = 277

 Score =  123 bits (308), Expect = 2e-26
 Identities = 59/76 (77%), Positives = 66/76 (86%)
 Frame = +2

Query: 2   IKRVIDLLFENRKAFTPEQINEVCYVDILANKGVFDSLKNNLKVRYDGNRFSYKSKHALK 181
           IKRVIDLL E R+AFTPEQINE CYVDI +NK V+DSL+NN KV YDG RFSYKSKH LK
Sbjct: 77  IKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKVHYDGRRFSYKSKHDLK 136

Query: 182 NKDQLLVLIRKFPEGI 229
           +K+QLL L+RKFPEGI
Sbjct: 137 DKNQLLYLVRKFPEGI 152


>ref|XP_002299546.1| predicted protein [Populus trichocarpa] gi|222846804|gb|EEE84351.1|
           predicted protein [Populus trichocarpa]
          Length = 284

 Score =  122 bits (307), Expect = 2e-26
 Identities = 60/76 (78%), Positives = 66/76 (86%)
 Frame = +2

Query: 2   IKRVIDLLFENRKAFTPEQINEVCYVDILANKGVFDSLKNNLKVRYDGNRFSYKSKHALK 181
           IKRVIDLL E R+AFTPEQIN+ CYVD+ +NK VFDSL+NN KV YDG RFSYKSKH LK
Sbjct: 80  IKRVIDLLLETRQAFTPEQINDHCYVDMNSNKAVFDSLRNNPKVHYDGKRFSYKSKHDLK 139

Query: 182 NKDQLLVLIRKFPEGI 229
           +K QLLVLIRKFPEGI
Sbjct: 140 DKSQLLVLIRKFPEGI 155


>ref|XP_002283557.1| PREDICTED: general transcription factor IIE subunit 2 [Vitis
           vinifera] gi|297742556|emb|CBI34705.3| unnamed protein
           product [Vitis vinifera]
          Length = 285

 Score =  122 bits (306), Expect = 3e-26
 Identities = 59/76 (77%), Positives = 65/76 (85%)
 Frame = +2

Query: 2   IKRVIDLLFENRKAFTPEQINEVCYVDILANKGVFDSLKNNLKVRYDGNRFSYKSKHALK 181
           IKRVIDLL E R+AFTPEQINE CYVD  ANK VFDSL+NN KV YDG RF+YKSKH LK
Sbjct: 76  IKRVIDLLLETRQAFTPEQINEACYVDTNANKAVFDSLRNNPKVSYDGKRFAYKSKHDLK 135

Query: 182 NKDQLLVLIRKFPEGI 229
           ++ QLLVL+RKFPEGI
Sbjct: 136 DRSQLLVLVRKFPEGI 151


>ref|XP_002509755.1| Transcription initiation factor IIE subunit beta, putative [Ricinus
           communis] gi|223549654|gb|EEF51142.1| Transcription
           initiation factor IIE subunit beta, putative [Ricinus
           communis]
          Length = 282

 Score =  119 bits (298), Expect = 3e-25
 Identities = 58/76 (76%), Positives = 64/76 (84%)
 Frame = +2

Query: 2   IKRVIDLLFENRKAFTPEQINEVCYVDILANKGVFDSLKNNLKVRYDGNRFSYKSKHALK 181
           IKRVIDLLFE R+AFTPEQINE CYVD+ +NK VFDSL+NN KV YDG  FSYKSKH LK
Sbjct: 78  IKRVIDLLFETRQAFTPEQINEACYVDVNSNKAVFDSLRNNPKVHYDGRHFSYKSKHDLK 137

Query: 182 NKDQLLVLIRKFPEGI 229
           +K QLL LIR+F EGI
Sbjct: 138 DKKQLLYLIREFKEGI 153


Top