BLASTX nr result

ID: Lithospermum22_contig00019572 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00019572
         (805 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262703.1| PREDICTED: dof zinc finger protein DOF4.6-li...   100   6e-19
ref|XP_002518880.1| zinc finger protein, putative [Ricinus commu...    95   2e-17
gb|ADL36684.1| DOF domain class transcription factor [Malus x do...    93   6e-17
ref|XP_002303678.1| f-box family protein [Populus trichocarpa] g...    90   7e-16
ref|XP_002299441.1| f-box family protein [Populus trichocarpa] g...    85   2e-14

>ref|XP_002262703.1| PREDICTED: dof zinc finger protein DOF4.6-like [Vitis vinifera]
          Length = 288

 Score = 99.8 bits (247), Expect = 6e-19
 Identities = 64/149 (42%), Positives = 84/149 (56%), Gaps = 13/149 (8%)
 Frame = +3

Query: 3   IQVPNFDNPNNKENLPXXXXXXXXXXX-----ALELLTGMTSSSRGFNSFIPMPPIGDPR 167
           +Q+P+ +N NN  N                  ALELLTG+TS  RG NSF+PMP I DP 
Sbjct: 152 MQMPSIENSNNNTNNSSKSHITSTSSTSSHLSALELLTGITS--RGLNSFMPMP-IPDPN 208

Query: 168 ------FSIPELKPSLNFYLGS--SGFGSLQSHMQESSGGLLFPFEDLNLKQGPTTTSTA 323
                 F + E KP+LNF L    SG+GS+Q     SSG LLFPFEDL         S+ 
Sbjct: 209 TVYTTGFPMQEFKPTLNFSLDGLGSGYGSIQGVQGSSSGRLLFPFEDLK------QVSST 262

Query: 324 TENVDQNKDQNHAAESTGYWNGVLGGGTW 410
            ++++Q ++Q    +STGYW G+LGGG+W
Sbjct: 263 ADHIEQTREQ---GDSTGYWTGMLGGGSW 288


>ref|XP_002518880.1| zinc finger protein, putative [Ricinus communis]
           gi|223541867|gb|EEF43413.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 306

 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 65/143 (45%), Positives = 86/143 (60%), Gaps = 9/143 (6%)
 Frame = +3

Query: 3   IQVPNFDNPNNKEN-LPXXXXXXXXXXXALELLTGMTSSSRGFNSFIPMPPIGDPR---- 167
           IQVP+ +  NN +N              ALELLTG+  SSRG NSF+PMP + DP     
Sbjct: 173 IQVPSINEGNNNKNPSSTSNTTTSSQLSALELLTGI--SSRGLNSFMPMP-VQDPNSVYT 229

Query: 168 --FSIPELKPSLNFYLGS--SGFGSLQSHMQESSGGLLFPFEDLNLKQGPTTTSTATENV 335
             F + + KP+LNF L    SG+GSLQ  +QE+ G LLFPFEDL        +ST+T+ +
Sbjct: 230 SGFPLQDFKPTLNFSLDGLGSGYGSLQG-VQETGGRLLFPFEDLK-----QVSSTSTD-I 282

Query: 336 DQNKDQNHAAESTGYWNGVLGGG 404
           +QN++Q    +S GYW G+LGGG
Sbjct: 283 EQNREQ---GDSAGYWTGMLGGG 302


>gb|ADL36684.1| DOF domain class transcription factor [Malus x domestica]
          Length = 315

 Score = 93.2 bits (230), Expect = 6e-17
 Identities = 59/126 (46%), Positives = 73/126 (57%), Gaps = 17/126 (13%)
 Frame = +3

Query: 84  ALELLTGMTSSSRGFNSFIPMPPIGDPRFS--------------IPELKPSLNFYLGS-- 215
           ALELLTG+TS  RG NSF+PMP   DP  +              + + KP+LNF +    
Sbjct: 201 ALELLTGLTS--RGLNSFMPMPVSSDPNNNSNTVYNSPSGLINPMQDFKPTLNFSIDGLG 258

Query: 216 SGFGSLQSH-MQESSGGLLFPFEDLNLKQGPTTTSTATENVDQNKDQNHAAESTGYWNGV 392
           SG+GSLQ H +QESSG LLFPFEDL  KQ P+      EN +         +S GYW G+
Sbjct: 259 SGYGSLQGHHVQESSGRLLFPFEDL--KQAPSGGGINEENKEHG-------DSAGYWTGM 309

Query: 393 LGGGTW 410
           LGGG+W
Sbjct: 310 LGGGSW 315


>ref|XP_002303678.1| f-box family protein [Populus trichocarpa]
           gi|222841110|gb|EEE78657.1| f-box family protein
           [Populus trichocarpa]
          Length = 279

 Score = 89.7 bits (221), Expect = 7e-16
 Identities = 63/146 (43%), Positives = 84/146 (57%), Gaps = 10/146 (6%)
 Frame = +3

Query: 3   IQVPNFDNPNNKENLPXXXXXXXXXXX--ALELLTGMTSSSRGFNSFIPMPPIGDPR--- 167
           IQVP+ +  NNK  +              ALELLTG+  SSRG NSF PMP + DP    
Sbjct: 149 IQVPSINENNNKNPISSSTSASTTTSQLSALELLTGI--SSRGLNSF-PMP-VQDPSTLY 204

Query: 168 ---FSIPELKPSLNFYLGSSG--FGSLQSHMQESSGGLLFPFEDLNLKQGPTTTSTATEN 332
              F + + KP+LNF L   G  +GSLQ  +QE++G LLFPFEDL          ++T +
Sbjct: 205 TSSFPLHDFKPTLNFSLDGLGSCYGSLQG-VQETNGRLLFPFEDLK-------QVSSTAD 256

Query: 333 VDQNKDQNHAAESTGYWNGVLGGGTW 410
           ++ NK+     +STGYW G+LGGG+W
Sbjct: 257 IEHNKEHG---DSTGYWTGMLGGGSW 279


>ref|XP_002299441.1| f-box family protein [Populus trichocarpa]
           gi|222846699|gb|EEE84246.1| f-box family protein
           [Populus trichocarpa]
          Length = 247

 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 54/116 (46%), Positives = 73/116 (62%), Gaps = 8/116 (6%)
 Frame = +3

Query: 87  LELLTGMTSSSRGFNSFIPMPPIGDPR------FSIPELKPSLNFYLGS--SGFGSLQSH 242
           LELLTG+  SSRG NSF PMP   DP       F + + KP+L+F L    SG+G LQ  
Sbjct: 145 LELLTGI--SSRGLNSF-PMPVHQDPSTLYPSGFPLQDFKPTLSFSLDGLGSGYGDLQG- 200

Query: 243 MQESSGGLLFPFEDLNLKQGPTTTSTATENVDQNKDQNHAAESTGYWNGVLGGGTW 410
           + E++G LLFPFEDL  +       ++T +++QNK+     +STGYW G+LGGG+W
Sbjct: 201 VHETNGRLLFPFEDLKQQV------SSTADIEQNKEHG---DSTGYWTGMLGGGSW 247


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