BLASTX nr result

ID: Lithospermum22_contig00019485 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00019485
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514252.1| RING-H2 finger protein ATL4J precursor, puta...   108   5e-22
emb|CBI28025.3| unnamed protein product [Vitis vinifera]              100   9e-20
ref|XP_002280643.1| PREDICTED: E3 ubiquitin-protein ligase ATL42...   100   9e-20
ref|XP_003517066.1| PREDICTED: E3 ubiquitin-protein ligase ATL42...    97   1e-18
ref|XP_003534218.1| PREDICTED: E3 ubiquitin-protein ligase ATL42...    95   5e-18

>ref|XP_002514252.1| RING-H2 finger protein ATL4J precursor, putative [Ricinus communis]
           gi|223546708|gb|EEF48206.1| RING-H2 finger protein ATL4J
           precursor, putative [Ricinus communis]
          Length = 267

 Score =  108 bits (270), Expect = 5e-22
 Identities = 55/84 (65%), Positives = 68/84 (80%)
 Frame = -1

Query: 351 VLHKLNHKIVISDVVLKHRWSNVSASDLLFLNSEMLSDISSNRFSALDMNNNEDMERSRV 172
           VLHK NHKI+ISDVVLK+RWSNVS+SDL+FLN+EML D+SSNRFS+ D NN + +     
Sbjct: 80  VLHKFNHKIIISDVVLKNRWSNVSSSDLMFLNAEMLQDMSSNRFSSSDSNNEQFIS---- 135

Query: 171 NKEGEVMDIKEEMEIKRLFESKFS 100
            +  +++ IKEEME KRLFESKFS
Sbjct: 136 TENEQMVKIKEEMEKKRLFESKFS 159


>emb|CBI28025.3| unnamed protein product [Vitis vinifera]
          Length = 413

 Score =  100 bits (250), Expect = 9e-20
 Identities = 51/98 (52%), Positives = 74/98 (75%)
 Frame = -1

Query: 351 VLHKLNHKIVISDVVLKHRWSNVSASDLLFLNSEMLSDISSNRFSALDMNNNEDMERSRV 172
           +LHK+NHKI++SDVVLK+RWS+VS+SDL++LNSE++  +SS+RF++LD NN+      R 
Sbjct: 261 ILHKINHKIIVSDVVLKNRWSSVSSSDLMYLNSELVHAMSSDRFASLDSNNS---AMGRP 317

Query: 171 NKEGEVMDIKEEMEIKRLFESKFSQTKKNEAFPFSILP 58
            ++ EVM IKEE+E KR+FES+ S+   +     S LP
Sbjct: 318 IEDWEVMKIKEEIERKRIFESRVSRINHSNPVSSSGLP 355


>ref|XP_002280643.1| PREDICTED: E3 ubiquitin-protein ligase ATL42 [Vitis vinifera]
          Length = 423

 Score =  100 bits (250), Expect = 9e-20
 Identities = 51/98 (52%), Positives = 74/98 (75%)
 Frame = -1

Query: 351 VLHKLNHKIVISDVVLKHRWSNVSASDLLFLNSEMLSDISSNRFSALDMNNNEDMERSRV 172
           +LHK+NHKI++SDVVLK+RWS+VS+SDL++LNSE++  +SS+RF++LD NN+      R 
Sbjct: 239 ILHKINHKIIVSDVVLKNRWSSVSSSDLMYLNSELVHAMSSDRFASLDSNNS---AMGRP 295

Query: 171 NKEGEVMDIKEEMEIKRLFESKFSQTKKNEAFPFSILP 58
            ++ EVM IKEE+E KR+FES+ S+   +     S LP
Sbjct: 296 IEDWEVMKIKEEIERKRIFESRVSRINHSNPVSSSGLP 333


>ref|XP_003517066.1| PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Glycine max]
          Length = 426

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 50/80 (62%), Positives = 60/80 (75%)
 Frame = -1

Query: 345 HKLNHKIVISDVVLKHRWSNVSASDLLFLNSEMLSDISSNRFSALDMNNNEDMERSRVNK 166
           HK NH+I ISDVV KHRWSNVS+SDL+FLNSEML+D SSNRFS L+ N +       V +
Sbjct: 239 HKHNHRITISDVVFKHRWSNVSSSDLMFLNSEMLNDASSNRFSNLESNADMMSSTRGVVE 298

Query: 165 EGEVMDIKEEMEIKRLFESK 106
             ++M+IKEEME K  FESK
Sbjct: 299 NEQIMNIKEEMERKISFESK 318


>ref|XP_003534218.1| PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Glycine max]
          Length = 419

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 50/80 (62%), Positives = 61/80 (76%)
 Frame = -1

Query: 345 HKLNHKIVISDVVLKHRWSNVSASDLLFLNSEMLSDISSNRFSALDMNNNEDMERSRVNK 166
           HK NH+I ISDVV KHRWSNVS+SDL+FLNSEML+D SSNRFS    +N E + R  V +
Sbjct: 239 HKHNHRITISDVVFKHRWSNVSSSDLMFLNSEMLNDTSSNRFS----SNLESITRGVVVE 294

Query: 165 EGEVMDIKEEMEIKRLFESK 106
             ++M+IKEEME K  FE+K
Sbjct: 295 NEQIMNIKEEMERKISFENK 314


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