BLASTX nr result

ID: Lithospermum22_contig00019480 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00019480
         (765 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003330989.1| ribosomal protein S8 [Parthenium argentatum]...   140   4e-31
ref|YP_007474765.1| ribosomal protein S8 (chloroplast) [Chrysant...   139   5e-31
ref|YP_007353802.1| ribosomal protein S8 (chloroplast) [Chrysant...   139   5e-31
ref|YP_004891642.1| rps8 gene product (chloroplast) [Nicotiana u...   139   5e-31
gb|ADD29867.1| ribosomal protein S8 [Ehretia acuminata]               139   5e-31

>ref|YP_003330989.1| ribosomal protein S8 [Parthenium argentatum]
           gi|269924865|gb|ACZ52738.1| ribosomal protein S8
           [Parthenium argentatum]
          Length = 134

 Score =  140 bits (352), Expect = 4e-31
 Identities = 71/92 (77%), Positives = 78/92 (84%)
 Frame = +1

Query: 250 KGVVRIGSTNITESIVKILLREGFIENVRKHRENNKPFLVLTLXXXXXXXXXXXNILNLK 429
           K VVR+ STNI++SIVKILLREGFIENVRKHRENNK FLVLTL           NILNLK
Sbjct: 21  KSVVRVASTNISQSIVKILLREGFIENVRKHRENNKEFLVLTLRHRRNRKRTYRNILNLK 80

Query: 430 RISRPGLRIYSNYKRIPRILGGMGIIILSTSK 525
           RISRPGLRIYSNY+RIPRILGGMG++ILSTS+
Sbjct: 81  RISRPGLRIYSNYQRIPRILGGMGVVILSTSR 112


>ref|YP_007474765.1| ribosomal protein S8 (chloroplast) [Chrysanthemum indicum]
           gi|372863242|gb|AEX99314.1| ribosomal protein S8
           (chloroplast) [Chrysanthemum indicum]
          Length = 134

 Score =  139 bits (351), Expect = 5e-31
 Identities = 71/92 (77%), Positives = 78/92 (84%)
 Frame = +1

Query: 250 KGVVRIGSTNITESIVKILLREGFIENVRKHRENNKPFLVLTLXXXXXXXXXXXNILNLK 429
           K VVR+ STNI+ESIVKILLREGFIENVRKHRENNK FLVLTL           N+LNLK
Sbjct: 21  KSVVRVASTNISESIVKILLREGFIENVRKHRENNKYFLVLTLRHRRNRKSTYRNLLNLK 80

Query: 430 RISRPGLRIYSNYKRIPRILGGMGIIILSTSK 525
           RISRPGLRIYSNY+RIPRILGGMG++ILSTS+
Sbjct: 81  RISRPGLRIYSNYQRIPRILGGMGVVILSTSR 112


>ref|YP_007353802.1| ribosomal protein S8 (chloroplast) [Chrysanthemum x morifolium]
           gi|372863481|gb|AEX99550.1| ribosomal protein S8
           (chloroplast) [Chrysanthemum indicum]
           gi|375298872|gb|AFA45311.1| ribosomal protein S8
           (chloroplast) [Chrysanthemum x morifolium]
          Length = 135

 Score =  139 bits (351), Expect = 5e-31
 Identities = 71/92 (77%), Positives = 78/92 (84%)
 Frame = +1

Query: 250 KGVVRIGSTNITESIVKILLREGFIENVRKHRENNKPFLVLTLXXXXXXXXXXXNILNLK 429
           K VVR+ STNI+ESIVKILLREGFIENVRKHRENNK FLVLTL           N+LNLK
Sbjct: 22  KSVVRVASTNISESIVKILLREGFIENVRKHRENNKYFLVLTLRHRRNRKSTYRNLLNLK 81

Query: 430 RISRPGLRIYSNYKRIPRILGGMGIIILSTSK 525
           RISRPGLRIYSNY+RIPRILGGMG++ILSTS+
Sbjct: 82  RISRPGLRIYSNYQRIPRILGGMGVVILSTSR 113


>ref|YP_004891642.1| rps8 gene product (chloroplast) [Nicotiana undulata]
           gi|347453946|gb|AEO95604.1| ribosomal protein S8
           (chloroplast) [Nicotiana undulata]
           gi|347454057|gb|AEO95714.1| ribosomal protein S8
           [synthetic construct]
          Length = 134

 Score =  139 bits (351), Expect = 5e-31
 Identities = 73/92 (79%), Positives = 78/92 (84%)
 Frame = +1

Query: 250 KGVVRIGSTNITESIVKILLREGFIENVRKHRENNKPFLVLTLXXXXXXXXXXXNILNLK 429
           K VVRI STNITE+IV+ILLREGFIENVRKHRENNK FLVLTL           NILNLK
Sbjct: 21  KRVVRIASTNITENIVQILLREGFIENVRKHRENNKHFLVLTLRHRRNRKRPYRNILNLK 80

Query: 430 RISRPGLRIYSNYKRIPRILGGMGIIILSTSK 525
           RISRPGLRIYSNY+RIPRILGGMGI+ILSTS+
Sbjct: 81  RISRPGLRIYSNYQRIPRILGGMGIVILSTSR 112


>gb|ADD29867.1| ribosomal protein S8 [Ehretia acuminata]
          Length = 134

 Score =  139 bits (351), Expect = 5e-31
 Identities = 73/92 (79%), Positives = 77/92 (83%)
 Frame = +1

Query: 250 KGVVRIGSTNITESIVKILLREGFIENVRKHRENNKPFLVLTLXXXXXXXXXXXNILNLK 429
           K VVRI STNITESIVKILLREGFIENVRKH+ENNK FLVLTL           NI NLK
Sbjct: 21  KRVVRIASTNITESIVKILLREGFIENVRKHQENNKSFLVLTLRHRRNRKRPYRNIFNLK 80

Query: 430 RISRPGLRIYSNYKRIPRILGGMGIIILSTSK 525
           RISRPGLRIYSNY+RIPRILGGMGI+ILSTS+
Sbjct: 81  RISRPGLRIYSNYQRIPRILGGMGIVILSTSR 112


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