BLASTX nr result

ID: Lithospermum22_contig00019419 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00019419
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEI72269.1| histone H2A [Citrus trifoliata]                        107   1e-21
ref|XP_002284305.1| PREDICTED: probable histone H2A.4 isoform 1 ...   107   1e-21
ref|XP_002274570.1| PREDICTED: probable histone H2A.4 isoform 1 ...   107   1e-21
ref|XP_002533104.1| histone h2a, putative [Ricinus communis] gi|...   106   2e-21
ref|XP_002533102.1| histone h2a, putative [Ricinus communis] gi|...   106   2e-21

>gb|AEI72269.1| histone H2A [Citrus trifoliata]
          Length = 150

 Score =  107 bits (266), Expect = 1e-21
 Identities = 56/75 (74%), Positives = 58/75 (77%)
 Frame = -1

Query: 227 VTRSVKAGLQFPVGRIGRYLKKGRYSERVGTGAPXXXXXXXXXXXXXXXXXAGNAARDNK 48
           V+RSVKAGLQFPVGRIGRYLKKGRYS+RVGTGAP                 AGNAARDNK
Sbjct: 24  VSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNK 83

Query: 47  KNRIIPRHVLLAVRN 3
           KNRIIPRHVLLAVRN
Sbjct: 84  KNRIIPRHVLLAVRN 98


>ref|XP_002284305.1| PREDICTED: probable histone H2A.4 isoform 1 [Vitis vinifera]
           gi|147841321|emb|CAN60181.1| hypothetical protein
           VITISV_014244 [Vitis vinifera]
           gi|297746122|emb|CBI16178.3| unnamed protein product
           [Vitis vinifera]
          Length = 149

 Score =  107 bits (266), Expect = 1e-21
 Identities = 56/75 (74%), Positives = 58/75 (77%)
 Frame = -1

Query: 227 VTRSVKAGLQFPVGRIGRYLKKGRYSERVGTGAPXXXXXXXXXXXXXXXXXAGNAARDNK 48
           V+RSVKAGLQFPVGRIGRYLKKGRYS+RVGTGAP                 AGNAARDNK
Sbjct: 24  VSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNK 83

Query: 47  KNRIIPRHVLLAVRN 3
           KNRIIPRHVLLAVRN
Sbjct: 84  KNRIIPRHVLLAVRN 98


>ref|XP_002274570.1| PREDICTED: probable histone H2A.4 isoform 1 [Vitis vinifera]
           gi|147769777|emb|CAN63391.1| hypothetical protein
           VITISV_009336 [Vitis vinifera]
          Length = 149

 Score =  107 bits (266), Expect = 1e-21
 Identities = 56/75 (74%), Positives = 58/75 (77%)
 Frame = -1

Query: 227 VTRSVKAGLQFPVGRIGRYLKKGRYSERVGTGAPXXXXXXXXXXXXXXXXXAGNAARDNK 48
           V+RSVKAGLQFPVGRIGRYLKKGRYS+RVGTGAP                 AGNAARDNK
Sbjct: 24  VSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNK 83

Query: 47  KNRIIPRHVLLAVRN 3
           KNRIIPRHVLLAVRN
Sbjct: 84  KNRIIPRHVLLAVRN 98


>ref|XP_002533104.1| histone h2a, putative [Ricinus communis]
           gi|223527095|gb|EEF29276.1| histone h2a, putative
           [Ricinus communis]
          Length = 150

 Score =  106 bits (264), Expect = 2e-21
 Identities = 55/75 (73%), Positives = 58/75 (77%)
 Frame = -1

Query: 227 VTRSVKAGLQFPVGRIGRYLKKGRYSERVGTGAPXXXXXXXXXXXXXXXXXAGNAARDNK 48
           VTRSV+AGLQFPVGRIGRYLKKGRY++RVGTGAP                 AGNAARDNK
Sbjct: 24  VTRSVRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNK 83

Query: 47  KNRIIPRHVLLAVRN 3
           KNRIIPRHVLLAVRN
Sbjct: 84  KNRIIPRHVLLAVRN 98


>ref|XP_002533102.1| histone h2a, putative [Ricinus communis]
           gi|223527093|gb|EEF29274.1| histone h2a, putative
           [Ricinus communis]
          Length = 150

 Score =  106 bits (264), Expect = 2e-21
 Identities = 55/75 (73%), Positives = 58/75 (77%)
 Frame = -1

Query: 227 VTRSVKAGLQFPVGRIGRYLKKGRYSERVGTGAPXXXXXXXXXXXXXXXXXAGNAARDNK 48
           VTRSV+AGLQFPVGRIGRYLKKGRY++RVGTGAP                 AGNAARDNK
Sbjct: 24  VTRSVRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNK 83

Query: 47  KNRIIPRHVLLAVRN 3
           KNRIIPRHVLLAVRN
Sbjct: 84  KNRIIPRHVLLAVRN 98


Top