BLASTX nr result

ID: Lithospermum22_contig00019388 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00019388
         (603 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306785.1| predicted protein [Populus trichocarpa] gi|2...   194   1e-47
ref|XP_002524751.1| pentatricopeptide repeat-containing protein,...   189   4e-46
emb|CBI28722.3| unnamed protein product [Vitis vinifera]              188   5e-46
ref|XP_003632339.1| PREDICTED: pentatricopeptide repeat-containi...   188   5e-46
ref|XP_004146992.1| PREDICTED: pentatricopeptide repeat-containi...   187   9e-46

>ref|XP_002306785.1| predicted protein [Populus trichocarpa] gi|222856234|gb|EEE93781.1|
           predicted protein [Populus trichocarpa]
          Length = 750

 Score =  194 bits (492), Expect = 1e-47
 Identities = 94/120 (78%), Positives = 104/120 (86%)
 Frame = -3

Query: 601 AQTFHSLVTGYAAIGGKYIEVTELWG*MKALGYCTGMKFD*ELLDAVLYTFVRGGFFIGA 422
           AQTFHS+VTGYAAIGGKYIEVTELWG MK++   T MKFD ELLD+VLYTFVRGGFF  A
Sbjct: 631 AQTFHSMVTGYAAIGGKYIEVTELWGEMKSIASATSMKFDQELLDSVLYTFVRGGFFSRA 690

Query: 421 NEVVEMMEKGNMFIDKYKYRVEFLKYHKTLCKGKTPKFQTESQLKKRESVLTFKMWVGLS 242
           NEVV+MMEKG MFIDKYKYR  +LKYHKTL KGKTPK QTES +KKRE+ LTFK W+GL+
Sbjct: 691 NEVVDMMEKGKMFIDKYKYRTLYLKYHKTLYKGKTPKIQTESLVKKREAALTFKKWLGLN 750


>ref|XP_002524751.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223535935|gb|EEF37594.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 787

 Score =  189 bits (479), Expect = 4e-46
 Identities = 92/120 (76%), Positives = 102/120 (85%)
 Frame = -3

Query: 601  AQTFHSLVTGYAAIGGKYIEVTELWG*MKALGYCTGMKFD*ELLDAVLYTFVRGGFFIGA 422
            AQTFHS+VTGYAAIGGKY+EVTELWG MK++   T MKFD ELLD+VLYTFVRGGFF  A
Sbjct: 668  AQTFHSMVTGYAAIGGKYVEVTELWGEMKSIASATSMKFDQELLDSVLYTFVRGGFFSRA 727

Query: 421  NEVVEMMEKGNMFIDKYKYRVEFLKYHKTLCKGKTPKFQTESQLKKRESVLTFKMWVGLS 242
            NEVV MMEK  MFIDKYKYR  FLKYHKTL KGK+PK QTE+Q +KRE+ L+FK WVGLS
Sbjct: 728  NEVVAMMEKVEMFIDKYKYRTLFLKYHKTLYKGKSPKIQTEAQARKREAALSFKKWVGLS 787


>emb|CBI28722.3| unnamed protein product [Vitis vinifera]
          Length = 1361

 Score =  188 bits (478), Expect = 5e-46
 Identities = 90/119 (75%), Positives = 101/119 (84%)
 Frame = -3

Query: 601  AQTFHSLVTGYAAIGGKYIEVTELWG*MKALGYCTGMKFD*ELLDAVLYTFVRGGFFIGA 422
            AQTFHS+VTGYAAIGGKY+EVTELWG MK+    + MKFD ELLDAVLYTFVRGGFF+ A
Sbjct: 1242 AQTFHSMVTGYAAIGGKYVEVTELWGEMKSFASSSSMKFDQELLDAVLYTFVRGGFFVRA 1301

Query: 421  NEVVEMMEKGNMFIDKYKYRVEFLKYHKTLCKGKTPKFQTESQLKKRESVLTFKMWVGL 245
            NEVVEMME+G MFIDKYKYR  FLKYHKTL K K PK QTE+Q ++R++ LTFK WVGL
Sbjct: 1302 NEVVEMMERGKMFIDKYKYRTLFLKYHKTLYKSKPPKVQTEAQFRRRDAALTFKKWVGL 1360


>ref|XP_003632339.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03100,
            mitochondrial-like [Vitis vinifera]
          Length = 784

 Score =  188 bits (478), Expect = 5e-46
 Identities = 90/119 (75%), Positives = 101/119 (84%)
 Frame = -3

Query: 601  AQTFHSLVTGYAAIGGKYIEVTELWG*MKALGYCTGMKFD*ELLDAVLYTFVRGGFFIGA 422
            AQTFHS+VTGYAAIGGKY+EVTELWG MK+    + MKFD ELLDAVLYTFVRGGFF+ A
Sbjct: 665  AQTFHSMVTGYAAIGGKYVEVTELWGEMKSFASSSSMKFDQELLDAVLYTFVRGGFFVRA 724

Query: 421  NEVVEMMEKGNMFIDKYKYRVEFLKYHKTLCKGKTPKFQTESQLKKRESVLTFKMWVGL 245
            NEVVEMME+G MFIDKYKYR  FLKYHKTL K K PK QTE+Q ++R++ LTFK WVGL
Sbjct: 725  NEVVEMMERGKMFIDKYKYRTLFLKYHKTLYKSKPPKVQTEAQFRRRDAALTFKKWVGL 783


>ref|XP_004146992.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03100,
            mitochondrial-like [Cucumis sativus]
            gi|449503826|ref|XP_004162196.1| PREDICTED:
            pentatricopeptide repeat-containing protein At1g03100,
            mitochondrial-like [Cucumis sativus]
          Length = 796

 Score =  187 bits (476), Expect = 9e-46
 Identities = 90/119 (75%), Positives = 102/119 (85%)
 Frame = -3

Query: 601  AQTFHSLVTGYAAIGGKYIEVTELWG*MKALGYCTGMKFD*ELLDAVLYTFVRGGFFIGA 422
            AQTFHS+VTGYAAIGGKY+EVTELWG MK++   + +KFD ELLD+VLYTFVRGGFF  A
Sbjct: 677  AQTFHSMVTGYAAIGGKYVEVTELWGEMKSIASASFLKFDQELLDSVLYTFVRGGFFARA 736

Query: 421  NEVVEMMEKGNMFIDKYKYRVEFLKYHKTLCKGKTPKFQTESQLKKRESVLTFKMWVGL 245
            NEVVE+MEK  MFIDKYKYR  FLKYH+TL KGK PKFQTE+QL+KRE+ L FK WVGL
Sbjct: 737  NEVVEVMEKDKMFIDKYKYRTLFLKYHRTLYKGKAPKFQTEAQLRKRETTLAFKKWVGL 795


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