BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00019382
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...    62   8e-16
gb|AAD17395.1| putative non-LTR retroelement reverse transcripta...    62   3e-15
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...    62   5e-15
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...    60   9e-15
gb|AAD32950.1| putative non-LTR retroelement reverse transcripta...    56   1e-14

>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 62.4 bits (150), Expect(2) = 8e-16
 Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
 Frame = +3

Query: 99  PNYPMQCFLLPIHVCNKINSILANFW-GSTENKRKIHWAKWKKLCDTKANGGLGFQD 266
           P Y M  +  P+ +  KI S +A FW GS++ +RKIHW  W  +C+ K  GG+GF+D
Sbjct: 805 PTYLMGVYKFPVFIIQKIQSAMARFWWGSSDTQRKIHWKNWDSMCNLKCFGGMGFKD 861



 Score = 45.8 bits (107), Expect(2) = 8e-16
 Identities = 20/41 (48%), Positives = 28/41 (68%)
 Frame = +2

Query: 266 FNLALLGKQVWRIITDPQGPLARIFKARYYPDGTF*DAKWG 388
           FN ALLG+Q WR+  +PQ  L R+ KA+Y+P+  F +A  G
Sbjct: 865 FNDALLGRQAWRLTREPQSLLGRVMKAKYFPNCDFLNAPLG 905


>gb|AAD17395.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1138

 Score = 62.4 bits (150), Expect(2) = 3e-15
 Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
 Frame = +3

Query: 105 YPMQCFLLPIHVCNKINSILANFW-GSTENKRKIHWAKWKKLCDTKANGGLGFQD 266
           Y M CF L    C  + S +++FW  + E+KRK HW  W+KLC  K +GGLGF+D
Sbjct: 579 YAMSCFKLTKTTCKNLTSAMSDFWWNALEHKRKTHWVSWEKLCLAKESGGLGFRD 633



 Score = 43.9 bits (102), Expect(2) = 3e-15
 Identities = 21/45 (46%), Positives = 27/45 (60%)
 Frame = +2

Query: 257 LPGFNLALLGKQVWRIITDPQGPLARIFKARYYPDGTF*DAKWGI 391
           +  FN ALL KQ WRI+  P    AR FK+RY+ D  F +A  G+
Sbjct: 634 IESFNQALLAKQSWRILQYPSFLFARFFKSRYFDDEEFLEADLGV 678


>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score = 62.4 bits (150), Expect(2) = 5e-15
 Identities = 26/56 (46%), Positives = 33/56 (58%)
 Frame = +3

Query: 99   PNYPMQCFLLPIHVCNKINSILANFWGSTENKRKIHWAKWKKLCDTKANGGLGFQD 266
            PNY M  F LP    + IN  +A FW   E  + IHW +W  LC +K +GGLGF+D
Sbjct: 1089 PNYTMSVFQLPAGTSDAINKCVARFWWGKEGGKGIHWRRWSDLCFSKKDGGLGFRD 1144



 Score = 43.1 bits (100), Expect(2) = 5e-15
 Identities = 20/41 (48%), Positives = 28/41 (68%)
 Frame = +2

Query: 266  FNLALLGKQVWRIITDPQGPLARIFKARYYPDGTF*DAKWG 388
            FN ALLGKQ WR++  P   +AR+ KA+Y+P   F +A+ G
Sbjct: 1148 FNQALLGKQGWRLMMYPDSLVARMLKAKYFPWDDFMEAELG 1188


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score = 60.5 bits (145), Expect(2) = 9e-15
 Identities = 25/57 (43%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
 Frame = +3

Query: 99  PNYPMQCFLLPIHVCNKINSILANFW-GSTENKRKIHWAKWKKLCDTKANGGLGFQD 266
           P Y M  + LP+ V  +I+S +A FW G   ++RK+HW  W+K+C  K  GG+GF+D
Sbjct: 808 PTYLMGVYKLPVAVIQEIHSAMARFWWGGKGDERKMHWLSWEKMCKPKCMGGMGFKD 864



 Score = 44.3 bits (103), Expect(2) = 9e-15
 Identities = 20/41 (48%), Positives = 28/41 (68%)
 Frame = +2

Query: 266 FNLALLGKQVWRIITDPQGPLARIFKARYYPDGTF*DAKWG 388
           FN ALLGKQVWR++ + +  L+R+  A+YYP G    A+ G
Sbjct: 868 FNDALLGKQVWRLLHNKESLLSRVMSAKYYPHGDVRYARLG 908


>gb|AAD32950.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 773

 Score = 56.2 bits (134), Expect(2) = 1e-14
 Identities = 27/57 (47%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
 Frame = +3

Query: 99  PNYPMQCFLLPIHVCNKINSILANFWGS-TENKRKIHWAKWKKLCDTKANGGLGFQD 266
           P Y M CFLLP+ + ++I S +  FW S T+ K KI W  W KL D K  GGL  +D
Sbjct: 256 PTYSMSCFLLPMRLIHQITSAMRWFWWSNTKVKHKIPWVAWSKLNDPKKMGGLAIRD 312



 Score = 48.1 bits (113), Expect(2) = 1e-14
 Identities = 22/42 (52%), Positives = 28/42 (66%)
 Frame = +2

Query: 257 LPGFNLALLGKQVWRIITDPQGPLARIFKARYYPDGTF*DAK 382
           L  FN+ALL KQ WRI+  P   +AR+FKA+Y+P     DAK
Sbjct: 313 LKDFNIALLAKQSWRILQQPFSLMARVFKAKYFPKERLLDAK 354