BLASTX nr result
ID: Lithospermum22_contig00019380
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00019380
(1794 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002264009.1| PREDICTED: replication protein A 70 kDa DNA-... 674 0.0
emb|CAN82475.1| hypothetical protein VITISV_038295 [Vitis vinifera] 672 0.0
ref|XP_004146122.1| PREDICTED: replication protein A 70 kDa DNA-... 647 0.0
ref|XP_002519884.1| replication factor A 1, rfa1, putative [Rici... 637 e-180
ref|XP_003533460.1| PREDICTED: replication protein A 70 kDa DNA-... 580 e-163
>ref|XP_002264009.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Vitis vinifera]
Length = 882
Score = 674 bits (1739), Expect = 0.0
Identities = 352/611 (57%), Positives = 421/611 (68%), Gaps = 29/611 (4%)
Frame = -2
Query: 1748 VKLSEGAIGQLASGNA---DSKPVLQLTDLRLVATTTL-NATERYRVMLSDGVHQQQGML 1581
V L+EGAI L SG+A D KPVLQ+ D+RLV T N+ ER+R++LSDG H QQGML
Sbjct: 3 VNLTEGAISMLCSGDAQGSDVKPVLQVADIRLVNTQQQSNSNERFRILLSDGCHLQQGML 62
Query: 1580 GVQLNGLVHSHKLKKGSIVQLTDFTCNTIQKRXXXXXXXXXXXIEYCDQIGDPKQY-QAN 1404
Q N LV S +L+KGS+VQLT F CN I+ R +E CD IG+PKQY Q
Sbjct: 63 ATQRNELVKSGRLQKGSVVQLTQFVCNVIKDRMIIIIIDLDVILEKCDPIGEPKQYVQGG 122
Query: 1403 IDGEASSVPGFSAPHQPVGASYSTIPSVNGSVPHPKPLGSSYVPPAIESDAGSHPYRSSF 1224
G + + SAP T+ S + G S P + A + + +SF
Sbjct: 123 TAGGVAPIARTSAPMPSSVDHPGTVLGNPQSFGNSSLTGGSAAKPNMAGVASPY-HANSF 181
Query: 1223 SANRESGQYNTSGAPAKYLRTESNPMLSHSILK-----------------------NHVX 1113
S+N +SG++ + AP Y + + + + S N
Sbjct: 182 SSNPDSGRFAGTNAPPMYSKMQPDAGIPASAASTGSYGDQSTGFRNNKVEVSRAPYNAPA 241
Query: 1112 XXXXXXXXXXXPMFLNKGPIAKNEAPPRIIPISGLNPYQNRWTIKARVTVKGELRHYNNS 933
PM+ N+GP+A+NEA RIIPI+ LNPYQ RWTIKARVT KGELRHYNN
Sbjct: 242 RQPQSAYQQPPPMYTNRGPVARNEAAARIIPIAALNPYQGRWTIKARVTAKGELRHYNNP 301
Query: 932 KGEGKVFSFDLLDGEGGEIRVTCFNAVVDQFYHQIEAGKVYMISKGSLKPAQKNFNHLHN 753
+G+GKVFSFDLLD +GGEIRVTCFNAV DQFY+QIE GKVY+ISKGSLKPAQK FNHL N
Sbjct: 302 RGDGKVFSFDLLDSDGGEIRVTCFNAVADQFYNQIETGKVYLISKGSLKPAQKTFNHLRN 361
Query: 752 DHEILLDSTSTIQPCFEDDNSIPKQQFHFRSIGDIEGMDXXXXXXXXXXXXXXXXXXSLM 573
DHEI L+STSTIQPCF+DDNSIP+QQFHFRSI D+E M+ S+M
Sbjct: 362 DHEIFLESTSTIQPCFDDDNSIPRQQFHFRSISDVESMENNSVVDVIGVVSFISPSASIM 421
Query: 572 RKNGTETQKRTLQLKDMSGRSVEFTMWGNFCNAEGYTLQSICDSGGYPVLAVKACRVSDF 393
RKNGTETQKR L LKDMSGRSVE T+WGNFCNAEG LQ++CDSG +PVLAVK+ RV+DF
Sbjct: 422 RKNGTETQKRALHLKDMSGRSVELTLWGNFCNAEGQRLQNMCDSGVFPVLAVKSARVNDF 481
Query: 392 NGKSVGTISSSQLFIDPDSSEAHSLKAWFENNGKNAPSISLSREM-GMGRSDVRKTISQI 216
NGK+VGTIS+SQLFI+PD EA LK WF+ G+N PS+S+SRE+ MGR+DVRKTISQI
Sbjct: 482 NGKAVGTISTSQLFIEPDFPEARKLKEWFDKEGRNTPSVSISREVTSMGRTDVRKTISQI 541
Query: 215 KDEKLGTSEKPDWITVCATPIFIKGENFCYTACPLMIGDRKCHKKVTNNGDGKWRCERCE 36
KDE+LGTSEKPDWITVCAT FIK +NFCYTACP+MIGDR+C+KKVTNNGDGKWRCERC+
Sbjct: 542 KDERLGTSEKPDWITVCATVSFIKVDNFCYTACPIMIGDRQCNKKVTNNGDGKWRCERCD 601
Query: 35 QDVDECDYRYI 3
Q VD+CDYRYI
Sbjct: 602 QSVDDCDYRYI 612
>emb|CAN82475.1| hypothetical protein VITISV_038295 [Vitis vinifera]
Length = 882
Score = 672 bits (1733), Expect = 0.0
Identities = 351/611 (57%), Positives = 420/611 (68%), Gaps = 29/611 (4%)
Frame = -2
Query: 1748 VKLSEGAIGQLASGNA---DSKPVLQLTDLRLVATTTL-NATERYRVMLSDGVHQQQGML 1581
V L+EGAI L SG+A D KPVLQ+ D+RLV T N+ ER+R++LSDG H QQGML
Sbjct: 3 VNLTEGAISMLCSGDAQGSDVKPVLQVADIRLVNTQQQSNSNERFRILLSDGCHLQQGML 62
Query: 1580 GVQLNGLVHSHKLKKGSIVQLTDFTCNTIQKRXXXXXXXXXXXIEYCDQIGDPKQY-QAN 1404
Q N LV S +L+KGS+VQLT F CN I+ R +E CD IG+PKQY Q
Sbjct: 63 ATQRNELVKSGRLQKGSVVQLTQFVCNVIKDRMIIIIIDLDVILEKCDPIGEPKQYVQGG 122
Query: 1403 IDGEASSVPGFSAPHQPVGASYSTIPSVNGSVPHPKPLGSSYVPPAIESDAGSHPYRSSF 1224
G + + SAP T+ S + G S P + A + + +SF
Sbjct: 123 TAGGVAPIARTSAPMPSSVDHPGTVLGNPQSFGNSSLTGGSAAKPNMAGVASPY-HANSF 181
Query: 1223 SANRESGQYNTSGAPAKYLRTESNPMLSHSILK-----------------------NHVX 1113
S+N +SG++ + AP Y + + + + S N
Sbjct: 182 SSNPDSGRFAGTNAPPMYSKMQPDAGIPASAASTGSYGDQSTGFRNNKVEVSRAPYNAPA 241
Query: 1112 XXXXXXXXXXXPMFLNKGPIAKNEAPPRIIPISGLNPYQNRWTIKARVTVKGELRHYNNS 933
PM+ N+GP+A+NEA RIIPI+ LNPYQ RWTIKARVT KGELRHYNN
Sbjct: 242 RQPQSAYQQPPPMYTNRGPVARNEAXARIIPIAALNPYQGRWTIKARVTAKGELRHYNNP 301
Query: 932 KGEGKVFSFDLLDGEGGEIRVTCFNAVVDQFYHQIEAGKVYMISKGSLKPAQKNFNHLHN 753
+G+GKVFSFDLLD +GGEIRVTCFNAV DQFY+QIE GKVY+ISKGSLKPAQK FNHL N
Sbjct: 302 RGDGKVFSFDLLDSDGGEIRVTCFNAVADQFYNQIETGKVYLISKGSLKPAQKTFNHLRN 361
Query: 752 DHEILLDSTSTIQPCFEDDNSIPKQQFHFRSIGDIEGMDXXXXXXXXXXXXXXXXXXSLM 573
DHEI L+STSTIQPCF+DDNSIP+QQFHFR I D+E M+ S+M
Sbjct: 362 DHEIFLESTSTIQPCFDDDNSIPRQQFHFRXISDVESMENNSVVDVIGVVSFISPSASIM 421
Query: 572 RKNGTETQKRTLQLKDMSGRSVEFTMWGNFCNAEGYTLQSICDSGGYPVLAVKACRVSDF 393
RKNGTETQKR L LKDMSGRSVE T+WGNFCNAEG LQ++CDSG +PVLAVK+ RV+DF
Sbjct: 422 RKNGTETQKRALHLKDMSGRSVELTLWGNFCNAEGQRLQNMCDSGVFPVLAVKSARVNDF 481
Query: 392 NGKSVGTISSSQLFIDPDSSEAHSLKAWFENNGKNAPSISLSREM-GMGRSDVRKTISQI 216
NGK+VGTIS+SQLFI+PD EA LK WF+ G+N PS+S+SRE+ MGR+DVRKTISQI
Sbjct: 482 NGKAVGTISTSQLFIEPDFPEARKLKEWFDKEGRNTPSVSISREVTXMGRTDVRKTISQI 541
Query: 215 KDEKLGTSEKPDWITVCATPIFIKGENFCYTACPLMIGDRKCHKKVTNNGDGKWRCERCE 36
KDE+LGTSEKPDWITVCAT FIK +NFCYTACP+MIGDR+C+KKVTNNGDGKWRCERC+
Sbjct: 542 KDERLGTSEKPDWITVCATVSFIKVDNFCYTACPIMIGDRQCNKKVTNNGDGKWRCERCD 601
Query: 35 QDVDECDYRYI 3
Q VD+CDYRYI
Sbjct: 602 QSVDDCDYRYI 612
>ref|XP_004146122.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Cucumis sativus]
Length = 861
Score = 647 bits (1669), Expect = 0.0
Identities = 341/610 (55%), Positives = 416/610 (68%), Gaps = 29/610 (4%)
Frame = -2
Query: 1745 KLSEGAIGQLASGNADSK---PVLQLTDLRLVATTTLNATERYRVMLSDGVHQQQGMLGV 1575
KL+EGA+ + + ++ P+LQ+ DL+LV T+ + +ER+R+++SDG H QQGMLG
Sbjct: 9 KLTEGAVMVICKRESSAETFQPILQVIDLKLVNTSQQSGSERFRLLVSDGTHFQQGMLGT 68
Query: 1574 QLNGLVHSHKLKKGSIVQLTDFTCNTIQKRXXXXXXXXXXXIEYCDQIGDPKQYQANIDG 1395
QLN LV S KL+KGSIV+L + CN +Q+R E CD IG+P +
Sbjct: 69 QLNELVKSGKLQKGSIVRLRQYVCNPVQERLIIIVIELDVIEEMCDIIGEP------VSA 122
Query: 1394 EASSVPGFSAPHQPVGASYSTIPSVNGSVPHPKPLGSSYVPPAIESDAGSH-PYRSSFSA 1218
SS S P P +G + +S+ P + SH P+ S+S
Sbjct: 123 TRSSANALSGNPLPSVGGLGASPG-SGMIGKGNVSSASFEQPKVNQ---SHVPHMGSYSN 178
Query: 1217 NRESGQYNTSGAPAKYLRTESNP----------------MLSHSI--------LKNHVXX 1110
E+G+++ S AP Y +T+S M H+ L ++
Sbjct: 179 PPETGRFSASIAPPSYSKTDSGSRFNGPSPLTGSYGDQKMAYHNSGSDIPRPPLNSNAYA 238
Query: 1109 XXXXXXXXXXPMFLNKGPIAKNEAPPRIIPISGLNPYQNRWTIKARVTVKGELRHYNNSK 930
M+ N+GPIAKNEA PRI+PIS LNPYQ RWTIKARVT KGELRHYNN +
Sbjct: 239 RPQPIYQQPPSMYSNRGPIAKNEAAPRIMPISALNPYQGRWTIKARVTSKGELRHYNNPR 298
Query: 929 GEGKVFSFDLLDGEGGEIRVTCFNAVVDQFYHQIEAGKVYMISKGSLKPAQKNFNHLHND 750
G+GKVFSFDLLD GEIRVTCFN V DQFY+QIE+GKVY ISKGSLKPAQKNFNHL ND
Sbjct: 299 GDGKVFSFDLLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNFNHLKND 358
Query: 749 HEILLDSTSTIQPCFEDDNSIPKQQFHFRSIGDIEGMDXXXXXXXXXXXXXXXXXXSLMR 570
+EI L++TSTIQPCFEDD SIP+QQFHF IG+IEGMD SLMR
Sbjct: 359 YEIFLENTSTIQPCFEDDQSIPQQQFHFHQIGEIEGMDSNSVVDVIGVVSSINPATSLMR 418
Query: 569 KNGTETQKRTLQLKDMSGRSVEFTMWGNFCNAEGYTLQSICDSGGYPVLAVKACRVSDFN 390
KNGTETQKR+LQLKDMSGRSVE T+WGNFC AEG LQ++CDSG +PVLAVK+ RVSDFN
Sbjct: 419 KNGTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSSRVSDFN 478
Query: 389 GKSVGTISSSQLFIDPDSSEAHSLKAWFENNGKNAPSISLSREM-GMGRSDVRKTISQIK 213
GK+VGTIS+SQLFI+PD EAHSL+ WFE G++ S+S+SRE+ +GR+DVRKTISQIK
Sbjct: 479 GKAVGTISTSQLFIEPDFPEAHSLREWFEREGRSTLSVSISREVASVGRTDVRKTISQIK 538
Query: 212 DEKLGTSEKPDWITVCATPIFIKGENFCYTACPLMIGDRKCHKKVTNNGDGKWRCERCEQ 33
DE+LGTSEKPDWITV AT FIK ++FCYTACP+MIGDR+C KKVTNNGDGKWRC+RC+Q
Sbjct: 539 DERLGTSEKPDWITVSATVSFIKVDSFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQ 598
Query: 32 DVDECDYRYI 3
VDECDYRYI
Sbjct: 599 SVDECDYRYI 608
>ref|XP_002519884.1| replication factor A 1, rfa1, putative [Ricinus communis]
gi|223540930|gb|EEF42488.1| replication factor A 1, rfa1,
putative [Ricinus communis]
Length = 901
Score = 637 bits (1642), Expect = e-180
Identities = 340/635 (53%), Positives = 410/635 (64%), Gaps = 51/635 (8%)
Frame = -2
Query: 1754 SKVKLSEGAIGQLASGNADS---KPVLQLTDLRLVATTTLNATERYRVMLSDGVHQQQGM 1584
+ + LSEGAI ++ SG A + KP LQ+T+L+ V T +ER+R++LSDG H QQ M
Sbjct: 2 ANMNLSEGAISKITSGGATAAELKPTLQVTELKQVQTKQPQQSERFRLILSDGSHLQQAM 61
Query: 1583 LGVQLNGLVHSHKLKKGSIVQLTDFTCNTIQKRXXXXXXXXXXXIEY------------- 1443
LG Q+N LV L+ GS+VQL +TC T+Q R
Sbjct: 62 LGTQINHLVKDGNLRPGSVVQLIQYTCTTVQGRMLLGSRSCIGCERNRGRAYLLLNEILL 121
Query: 1442 -------CDQIGDPKQYQANIDGEASSVPGFSAPHQPVGA-----SYSTIPSVNGSVPHP 1299
C IG+P Q + P + QPV + SY + G V +P
Sbjct: 122 GFFSFAKCAIIGNPVSAQKTLG------PSHPSTDQPVSSPANPQSYGSGSPAGGMVENP 175
Query: 1298 KPLGSSYVPPAIESDAGSHPYRSSFSANRESGQYNTSGAPAKYLRTESNPMLSHSILKNH 1119
SS P + GS S ++ +SG+Y T+ AP +L+ E L S N
Sbjct: 176 NLNVSSLQNPRMNQLHGS-----SHPSSYDSGRYVTTNAPPCHLKAEPGSGLPGSASMNR 230
Query: 1118 ----------------------VXXXXXXXXXXXXPMFLNKGPIAKNEAPPRIIPISGLN 1005
PM+ N+GP+AKNEAPPRI+PIS LN
Sbjct: 231 SYNEQSAGFCNPRPEIPQTTGTYPYPPCPAYQQPPPMYSNRGPVAKNEAPPRIMPISALN 290
Query: 1004 PYQNRWTIKARVTVKGELRHYNNSKGEGKVFSFDLLDGEGGEIRVTCFNAVVDQFYHQIE 825
PYQ RWTIKARVT KGELRHYNN +G+GKVFSFDLLD +GGEIRV CFN V DQFYHQIE
Sbjct: 291 PYQGRWTIKARVTAKGELRHYNNVRGDGKVFSFDLLDSDGGEIRVICFNTVADQFYHQIE 350
Query: 824 AGKVYMISKGSLKPAQKNFNHLHNDHEILLDSTSTIQPCFEDDNSIPKQQFHFRSIGDIE 645
AGKVY+IS+G+LKPAQK FNHLHND EI L+S S IQPCFEDD++IP+QQFHFR I ++E
Sbjct: 351 AGKVYLISRGNLKPAQKTFNHLHNDLEIFLESNSVIQPCFEDDDAIPRQQFHFRPISEVE 410
Query: 644 GMDXXXXXXXXXXXXXXXXXXSLMRKNGTETQKRTLQLKDMSGRSVEFTMWGNFCNAEGY 465
GMD S+MRKNGTETQKRTLQLKD SGRSVE T+WGNFCNAEG
Sbjct: 411 GMDNNSVVDIIGMVSCITPVASIMRKNGTETQKRTLQLKDNSGRSVELTLWGNFCNAEGQ 470
Query: 464 TLQSICDSGGYPVLAVKACRVSDFNGKSVGTISSSQLFIDPDSSEAHSLKAWFENNGKNA 285
LQ++CDSGG+PVLAVK+ RVSDFNGK+VGTIS+SQLFI+PD EA LK WFE G+N
Sbjct: 471 RLQNMCDSGGFPVLAVKSGRVSDFNGKAVGTISTSQLFIEPDIPEARRLKEWFEKEGRNT 530
Query: 284 PSISLSREM-GMGRSDVRKTISQIKDEKLGTSEKPDWITVCATPIFIKGENFCYTACPLM 108
PS+S+SRE+ +GRS++ KTISQIKDEKLGTSEKPDWIT+ AT I+IK +NFCYTACP+M
Sbjct: 531 PSVSISRELSSVGRSEIHKTISQIKDEKLGTSEKPDWITINATVIYIKADNFCYTACPIM 590
Query: 107 IGDRKCHKKVTNNGDGKWRCERCEQDVDECDYRYI 3
GDR C KKVTNNGDGKWRCE+C+Q +DECDYRYI
Sbjct: 591 AGDRPCSKKVTNNGDGKWRCEKCDQSMDECDYRYI 625
>ref|XP_003533460.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Glycine max]
Length = 894
Score = 580 bits (1496), Expect = e-163
Identities = 308/607 (50%), Positives = 388/607 (63%), Gaps = 25/607 (4%)
Frame = -2
Query: 1748 VKLSEGAIGQLASGNADS--KPVLQLTDLRLVATTTLNATERYRVMLSDGVHQQQGMLGV 1575
V L++ AI ++ S N +PVLQ+ +L+LV + + ERYR++LSDG H QQGML
Sbjct: 3 VSLTQSAIMEMCSANCPEGLQPVLQVIELKLVQSQQNSNVERYRLVLSDGSHYQQGMLAT 62
Query: 1574 QLNGLVHSHKLKKGSIVQLTDFTCNTIQKRXXXXXXXXXXXIEYCDQIGDPKQYQANIDG 1395
Q N LVH+ KL+KGS+V+LT F CN +Q R ++ C+ IG+P A D
Sbjct: 63 QKNDLVHAGKLQKGSVVRLTQFICNVVQSRKIIIIVDLDVVLDKCELIGEP--VPAPKDA 120
Query: 1394 EASSVPGFSAPHQPVGASYSTIPSVNGSVPHPKPLGSSYVPPAIESDAGSHPYRSSFSAN 1215
S G S S P + S H G P + S + HP N
Sbjct: 121 PTESATGQSGVT-------SGNPQLLNSSSHT---GGMPARPNVASPSPDHP-----KVN 165
Query: 1214 RESGQYNTSGAPAKYLRTES--------------------NPML--SHSILKNHVXXXXX 1101
+ +S AP Y + E NP S + ++
Sbjct: 166 PSASGVYSSNAPPTYPKVEHGVSRSAPFSGSSGGQNTGFRNPQFEASRPLQNSYARPPQQ 225
Query: 1100 XXXXXXXPMFLNKGPIAKNEAPPRIIPISGLNPYQNRWTIKARVTVKGELRHYNNSKGEG 921
PM+ N+ P+ +NEA PRIIPI+ LNPYQ+ WTIKARVT KGELRHY N++G+G
Sbjct: 226 PMYRQPSPMYTNRAPMGRNEAAPRIIPIAALNPYQSMWTIKARVTFKGELRHYTNARGDG 285
Query: 920 KVFSFDLLDGEGGEIRVTCFNAVVDQFYHQIEAGKVYMISKGSLKPAQKNFNHLHNDHEI 741
KVFSFDLLD +GGEIR TCFNAV DQFY+ IEAGKVY+IS+GS+KPAQKNFNHL ND E+
Sbjct: 286 KVFSFDLLDSDGGEIRATCFNAVADQFYNVIEAGKVYLISRGSIKPAQKNFNHLRNDQEL 345
Query: 740 LLDSTSTIQPCFEDDNSIPKQQFHFRSIGDIEGMDXXXXXXXXXXXXXXXXXXSLMRKNG 561
LD S IQPC +D++SIP Q F++R I +IE ++ S+MRKNG
Sbjct: 346 TLDVASIIQPCLDDNDSIPSQTFNYRPISEIESLENNSIVDVIGVVTSISPTASIMRKNG 405
Query: 560 TETQKRTLQLKDMSGRSVEFTMWGNFCNAEGYTLQSICDSGGYPVLAVKACRVSDFNGKS 381
TE QKRTLQLKDMSGRSVE T+WGNFC EG LQ+ICD+G +PVLA KA RV+DFNGKS
Sbjct: 406 TEVQKRTLQLKDMSGRSVELTLWGNFCIVEGQRLQTICDAGEFPVLATKAVRVNDFNGKS 465
Query: 380 VGTISSSQLFIDPDSSEAHSLKAWFENNGKNAPSISLSREM-GMGRSDVRKTISQIKDEK 204
VGTI++SQL+++PD EA +LK WFEN GK+ P++S+SRE+ +G++DVRKTISQIKDEK
Sbjct: 466 VGTIATSQLYVEPDFPEACTLKRWFENEGKSVPTLSISREISNLGKTDVRKTISQIKDEK 525
Query: 203 LGTSEKPDWITVCATPIFIKGENFCYTACPLMIGDRKCHKKVTNNGDGKWRCERCEQDVD 24
LGTSEKPDWI+V A IK +NFCY CPL IGDR+C+KKVTNN DG W CERC Q +D
Sbjct: 526 LGTSEKPDWISVFAAVSHIKVDNFCYPGCPLKIGDRQCNKKVTNNADGTWHCERCNQSID 585
Query: 23 ECDYRYI 3
CD+RY+
Sbjct: 586 TCDFRYL 592