BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00019346
         (1597 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271690.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...   391   e-106
ref|XP_002271651.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...   390   e-106
emb|CBI38762.3| unnamed protein product [Vitis vinifera]              385   e-104
ref|XP_002509740.1| cleavage and polyadenylation specificity fac...   367   5e-99
ref|XP_003611137.1| E3 ubiquitin-protein ligase [Medicago trunca...   366   8e-99

>ref|XP_002271690.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
            [Vitis vinifera]
          Length = 365

 Score =  391 bits (1004), Expect = e-106
 Identities = 205/371 (55%), Positives = 227/371 (61%), Gaps = 3/371 (0%)
 Frame = -1

Query: 1477 NNTNSDVGVVDTTPFLS---DDSNSRRPRLSRRTXXXXXXXXXXXXXXXXXXXREPSXXX 1307
            +   S     DTTP L     D   R  RL RR                    REPS   
Sbjct: 2    STARSSADATDTTPLLHASVSDQILRSRRLIRRPPSLRGAARFLRRASSRRIMREPSMRV 61

Query: 1306 XXXXXXXXXXXQSDWAYSKPIVILDLIWNXXXXXXXXXXXXXXXFESPSMPLRVWIVGYG 1127
                       QSDWAYSKPIVILD++WN                E+PS PLR+WI+GYG
Sbjct: 62   RETAAEQLEERQSDWAYSKPIVILDIVWNLAFVVVAMTVLVMSRDETPSTPLRLWIIGYG 121

Query: 1126 FQCVVHMVCVCLEYMRRWESPRRIXXXXXXXXXXXXXXXXXXDYISQTQNSREEISVAKH 947
             QCV+HMVCVC+EY RR    RR+                       + +     SVAKH
Sbjct: 122  LQCVLHMVCVCVEYKRR----RRLVSSGALERSGGWGSGHL-----SSSSGNFSCSVAKH 172

Query: 946  LESANTMFSFIWWIIGFYWVSAGGVNLTQDSPQLYWLCITFLXXXXXXXXXXXXXXXXXX 767
            LESANTMFSFIWWIIGFYWVSAGG +LT+DSPQLYWLCI FL                  
Sbjct: 173  LESANTMFSFIWWIIGFYWVSAGGQDLTRDSPQLYWLCIVFLAFDVFFVVICVAVACVIG 232

Query: 766  XXXXXCLPCIIAILYAVADQEGATKEDIERLPKYKFRLIGDFEKQNGEIQESFGGIMTEC 587
                 CLPCIIAILY VADQEGATKE+IERLPKYKFR IG+ EK NGEIQESFGGIMTEC
Sbjct: 233  IAVCCCLPCIIAILYTVADQEGATKEEIERLPKYKFRRIGESEKLNGEIQESFGGIMTEC 292

Query: 586  EVDSPMEHVLPQEDAECCICLCAYDDGAELRELPCHHHFHCSCIDKWLFINATCPLCKFN 407
            + D+PMEHV+PQEDAECCICL AY+D  ELRELPC H FHC+CIDKWL+INATCPLCK N
Sbjct: 293  DTDTPMEHVIPQEDAECCICLSAYEDETELRELPCRHRFHCTCIDKWLYINATCPLCKLN 352

Query: 406  ILKNGNQSGSE 374
            ILKN +QSG E
Sbjct: 353  ILKNASQSGCE 363


>ref|XP_002271651.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
            [Vitis vinifera]
          Length = 382

 Score =  390 bits (1003), Expect = e-106
 Identities = 209/383 (54%), Positives = 231/383 (60%), Gaps = 15/383 (3%)
 Frame = -1

Query: 1477 NNTNSDVGVVDTTPFLS---DDSNSRRPRLSRRTXXXXXXXXXXXXXXXXXXXREPSXXX 1307
            +   S     DTTP L     D   R  RL RR                    REPS   
Sbjct: 2    STARSSADATDTTPLLHASVSDQILRSRRLIRRPPSLRGAARFLRRASSRRIMREPSMRV 61

Query: 1306 XXXXXXXXXXXQSDWAYSKPIVILDLIWNXXXXXXXXXXXXXXXFESPSMPLRVWIVGYG 1127
                       QSDWAYSKPIVILD++WN                E+PS PLR+WI+GYG
Sbjct: 62   RETAAEQLEERQSDWAYSKPIVILDIVWNLAFVVVAMTVLVMSRDETPSTPLRLWIIGYG 121

Query: 1126 FQCVVHMVCVCLEYMRRWESPRRIXXXXXXXXXXXXXXXXXXD-----------YISQTQ 980
             QCV+HMVCVC+EY RR    RR+                              Y  + +
Sbjct: 122  LQCVLHMVCVCVEYKRR----RRLVSSGALERSGGWGSGHLSSSSGSDEGDPIDYRVEVR 177

Query: 979  NSRE-EISVAKHLESANTMFSFIWWIIGFYWVSAGGVNLTQDSPQLYWLCITFLXXXXXX 803
            N  E E SVAKHLESANTMFSFIWWIIGFYWVSAGG +LT+DSPQLYWLCI FL      
Sbjct: 178  NRDEDETSVAKHLESANTMFSFIWWIIGFYWVSAGGQDLTRDSPQLYWLCIVFLAFDVFF 237

Query: 802  XXXXXXXXXXXXXXXXXCLPCIIAILYAVADQEGATKEDIERLPKYKFRLIGDFEKQNGE 623
                             CLPCIIAILY VADQEGATKE+IERLPKYKFR IG+ EK NGE
Sbjct: 238  VVICVAVACVIGIAVCCCLPCIIAILYTVADQEGATKEEIERLPKYKFRRIGESEKLNGE 297

Query: 622  IQESFGGIMTECEVDSPMEHVLPQEDAECCICLCAYDDGAELRELPCHHHFHCSCIDKWL 443
            IQESFGGIMTEC+ D+PMEHV+PQEDAECCICL AY+D  ELRELPC H FHC+CIDKWL
Sbjct: 298  IQESFGGIMTECDTDTPMEHVIPQEDAECCICLSAYEDETELRELPCRHRFHCTCIDKWL 357

Query: 442  FINATCPLCKFNILKNGNQSGSE 374
            +INATCPLCK NILKN +QSG E
Sbjct: 358  YINATCPLCKLNILKNASQSGCE 380


>emb|CBI38762.3| unnamed protein product [Vitis vinifera]
          Length = 329

 Score =  385 bits (988), Expect = e-104
 Identities = 196/329 (59%), Positives = 217/329 (65%), Gaps = 12/329 (3%)
 Frame = -1

Query: 1324 EPSXXXXXXXXXXXXXXQSDWAYSKPIVILDLIWNXXXXXXXXXXXXXXXFESPSMPLRV 1145
            EPS              QSDWAYSKPIVILD++WN                E+PS PLR+
Sbjct: 3    EPSMRVRETAAEQLEERQSDWAYSKPIVILDIVWNLAFVVVAMTVLVMSRDETPSTPLRL 62

Query: 1144 WIVGYGFQCVVHMVCVCLEYMRRWESPRRIXXXXXXXXXXXXXXXXXXD----------- 998
            WI+GYG QCV+HMVCVC+EY RR    RR+                              
Sbjct: 63   WIIGYGLQCVLHMVCVCVEYKRR----RRLVSSGALERSGGWGSGHLSSSSGSDEGDPID 118

Query: 997  YISQTQNSRE-EISVAKHLESANTMFSFIWWIIGFYWVSAGGVNLTQDSPQLYWLCITFL 821
            Y  + +N  E E SVAKHLESANTMFSFIWWIIGFYWVSAGG +LT+DSPQLYWLCI FL
Sbjct: 119  YRVEVRNRDEDETSVAKHLESANTMFSFIWWIIGFYWVSAGGQDLTRDSPQLYWLCIVFL 178

Query: 820  XXXXXXXXXXXXXXXXXXXXXXXCLPCIIAILYAVADQEGATKEDIERLPKYKFRLIGDF 641
                                   CLPCIIAILY VADQEGATKE+IERLPKYKFR IG+ 
Sbjct: 179  AFDVFFVVICVAVACVIGIAVCCCLPCIIAILYTVADQEGATKEEIERLPKYKFRRIGES 238

Query: 640  EKQNGEIQESFGGIMTECEVDSPMEHVLPQEDAECCICLCAYDDGAELRELPCHHHFHCS 461
            EK NGEIQESFGGIMTEC+ D+PMEHV+PQEDAECCICL AY+D  ELRELPC H FHC+
Sbjct: 239  EKLNGEIQESFGGIMTECDTDTPMEHVIPQEDAECCICLSAYEDETELRELPCRHRFHCT 298

Query: 460  CIDKWLFINATCPLCKFNILKNGNQSGSE 374
            CIDKWL+INATCPLCK NILKN +QSG E
Sbjct: 299  CIDKWLYINATCPLCKLNILKNASQSGCE 327


>ref|XP_002509740.1| cleavage and polyadenylation specificity factor, putative [Ricinus
            communis] gi|223549639|gb|EEF51127.1| cleavage and
            polyadenylation specificity factor, putative [Ricinus
            communis]
          Length = 383

 Score =  367 bits (942), Expect = 5e-99
 Identities = 196/383 (51%), Positives = 229/383 (59%), Gaps = 6/383 (1%)
 Frame = -1

Query: 1504 MSSTIP-SDDNNTNSDVGVVDTTPFLSDDSNSRRPRLSRRTXXXXXXXXXXXXXXXXXXX 1328
            MS+T P S  N   S+  +VDTTP LS  S       SRR                    
Sbjct: 1    MSTTNPTSHPNPIRSNDDIVDTTPLLSSGSQGESNSSSRRQSLREAARFLRRASSRRMMR 60

Query: 1327 REPSXXXXXXXXXXXXXXQSDWAYSKPIVILDLIWNXXXXXXXXXXXXXXXFESPSMPLR 1148
             EPS              QSDWAYSKP+VILD++WN                E PSMPLR
Sbjct: 61   -EPSMLVRETAAEQLEERQSDWAYSKPVVILDILWNFAFVAVAIGVLIMSRKEDPSMPLR 119

Query: 1147 VWIVGYGFQCVVHMVCVCLEYMRRWESPRRIXXXXXXXXXXXXXXXXXXDY---ISQTQN 977
            +WIVGYG QCV+HMVCVC+EY RR    RR+                       ++Q ++
Sbjct: 120  LWIVGYGLQCVLHMVCVCVEYRRRRRRRRRVGFGIGSDGNLSSGSRGDSGEYVTLAQLED 179

Query: 976  SREEISVAKHLESANTMFSFIWWIIGFYWVSAGGVNLTQDSPQLYWLCITFLXXXXXXXX 797
                 SVAKHLESANTMFSFIWWIIGFYWVSAGG  L+ +SPQLYWLCI FL        
Sbjct: 180  HDGTSSVAKHLESANTMFSFIWWIIGFYWVSAGGQALSHNSPQLYWLCIIFLGFDVFFVV 239

Query: 796  XXXXXXXXXXXXXXXCLPCIIAILYAVADQEGATKEDIERLPKYKFRLIGDFEKQ--NGE 623
                           CLPCIIAILYAVADQEGA+KEDIE+L K+KFR + + EK   NG+
Sbjct: 240  FCVALACIIGIAVCCCLPCIIAILYAVADQEGASKEDIEQLSKFKFRRVDNDEKLTGNGD 299

Query: 622  IQESFGGIMTECEVDSPMEHVLPQEDAECCICLCAYDDGAELRELPCHHHFHCSCIDKWL 443
             Q   GG+MTEC  DSP+EH+L +EDAECCICL AYDDG ELRELPC HHFHC+C+DKWL
Sbjct: 300  EQGPLGGVMTECGTDSPVEHILSEEDAECCICLSAYDDGVELRELPCGHHFHCACVDKWL 359

Query: 442  FINATCPLCKFNILKNGNQSGSE 374
            +INATCPLCK+NILK+ ++   E
Sbjct: 360  YINATCPLCKYNILKSSSRDREE 382


>ref|XP_003611137.1| E3 ubiquitin-protein ligase [Medicago truncatula]
            gi|355512472|gb|AES94095.1| E3 ubiquitin-protein ligase
            [Medicago truncatula] gi|388506770|gb|AFK41451.1| unknown
            [Medicago truncatula]
          Length = 387

 Score =  366 bits (940), Expect = 8e-99
 Identities = 199/389 (51%), Positives = 227/389 (58%), Gaps = 16/389 (4%)
 Frame = -1

Query: 1486 SDDNNTNSDVGVVDTTPFLSDDSN-SRRPRLS----RRTXXXXXXXXXXXXXXXXXXXRE 1322
            S  N ++SD+  +D+TPFL++  N S    L+    RR                    RE
Sbjct: 2    STPNRSSSDI--IDSTPFLTNPGNGSSSDDLNNSGRRRRQRLLQAARFLRQASGRRTMRE 59

Query: 1321 PSXXXXXXXXXXXXXXQSDWAYSKPIVILDLIWNXXXXXXXXXXXXXXXFESPSMPLRVW 1142
            PS              QSDWAYSKP+VILD++WN                E+P MPLR+W
Sbjct: 60   PSVVVREAAAEQLEERQSDWAYSKPVVILDIVWNFAFVIVAGTALFLSRNEAPEMPLRLW 119

Query: 1141 IVGYGFQCVVHMVCVCLEYMRRWESPR-----------RIXXXXXXXXXXXXXXXXXXDY 995
            I GY  QCV+HMVCVC EY RR    R           RI                   Y
Sbjct: 120  IAGYVLQCVLHMVCVCFEYRRRRRFQRSSSSNAVAGSDRIGSGNFSSREGSRSAVSGSSY 179

Query: 994  ISQTQNSREEISVAKHLESANTMFSFIWWIIGFYWVSAGGVNLTQDSPQLYWLCITFLXX 815
            +S  Q   E  SVAKHLESANTMFSFIWWIIGFYWVSAGG  L QDSPQLYWLCI FL  
Sbjct: 180  VSLAQFDEESTSVAKHLESANTMFSFIWWIIGFYWVSAGGQALAQDSPQLYWLCIVFLGF 239

Query: 814  XXXXXXXXXXXXXXXXXXXXXCLPCIIAILYAVADQEGATKEDIERLPKYKFRLIGDFEK 635
                                 CLPCIIA+LYAVADQEGA+KEDIE+L K+KFR +   EK
Sbjct: 240  DVFFVVFCVALACVIGIAVCCCLPCIIALLYAVADQEGASKEDIEQLSKFKFRKVESNEK 299

Query: 634  QNGEIQESFGGIMTECEVDSPMEHVLPQEDAECCICLCAYDDGAELRELPCHHHFHCSCI 455
            Q    Q   GGIMTEC  DSP+EHVL +EDAECCICL +YDDG ELRELPC HHFHC+C+
Sbjct: 300  QTDNNQGPVGGIMTECRADSPIEHVLAEEDAECCICLSSYDDGVELRELPCGHHFHCACV 359

Query: 454  DKWLFINATCPLCKFNILKNGNQSGSEEV 368
            DKWL+INATCPLCK+NILK+ N  G EEV
Sbjct: 360  DKWLYINATCPLCKYNILKSSN-LGQEEV 387