BLASTX nr result

ID: Lithospermum22_contig00019343 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00019343
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275026.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    66   1e-10
ref|XP_003634187.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    66   1e-10
emb|CBI15398.3| unnamed protein product [Vitis vinifera]               66   1e-10
ref|XP_002298317.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-10
ref|XP_002529205.1| dead box ATP-dependent RNA helicase, putativ...    69   5e-10

>ref|XP_002275026.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 51-like isoform 1
           [Vitis vinifera]
          Length = 580

 Score = 66.2 bits (160), Expect(2) = 1e-10
 Identities = 31/36 (86%), Positives = 33/36 (91%)
 Frame = -3

Query: 462 LAYNSHSMKNIFNVRRLDLQAVAASFCFSSPPVTNL 355
           LAYNSHSMK+IFNV RLDLQAVA+SFCFSSPP  NL
Sbjct: 501 LAYNSHSMKDIFNVHRLDLQAVASSFCFSSPPKVNL 536



 Score = 24.6 bits (52), Expect(2) = 1e-10
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = -2

Query: 352 IDSNASKFRKKSDSREAT 299
           IDS+ASKFRKK+   E +
Sbjct: 538 IDSSASKFRKKTHKVEGS 555


>ref|XP_003634187.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 51-like isoform 2
           [Vitis vinifera]
          Length = 503

 Score = 66.2 bits (160), Expect(2) = 1e-10
 Identities = 31/36 (86%), Positives = 33/36 (91%)
 Frame = -3

Query: 462 LAYNSHSMKNIFNVRRLDLQAVAASFCFSSPPVTNL 355
           LAYNSHSMK+IFNV RLDLQAVA+SFCFSSPP  NL
Sbjct: 424 LAYNSHSMKDIFNVHRLDLQAVASSFCFSSPPKVNL 459



 Score = 24.6 bits (52), Expect(2) = 1e-10
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = -2

Query: 352 IDSNASKFRKKSDSREAT 299
           IDS+ASKFRKK+   E +
Sbjct: 461 IDSSASKFRKKTHKVEGS 478


>emb|CBI15398.3| unnamed protein product [Vitis vinifera]
          Length = 492

 Score = 66.2 bits (160), Expect(2) = 1e-10
 Identities = 31/36 (86%), Positives = 33/36 (91%)
 Frame = -3

Query: 462 LAYNSHSMKNIFNVRRLDLQAVAASFCFSSPPVTNL 355
           LAYNSHSMK+IFNV RLDLQAVA+SFCFSSPP  NL
Sbjct: 413 LAYNSHSMKDIFNVHRLDLQAVASSFCFSSPPKVNL 448



 Score = 24.6 bits (52), Expect(2) = 1e-10
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = -2

Query: 352 IDSNASKFRKKSDSREAT 299
           IDS+ASKFRKK+   E +
Sbjct: 450 IDSSASKFRKKTHKVEGS 467


>ref|XP_002298317.1| predicted protein [Populus trichocarpa] gi|222845575|gb|EEE83122.1|
           predicted protein [Populus trichocarpa]
          Length = 574

 Score = 67.4 bits (163), Expect(2) = 1e-10
 Identities = 32/36 (88%), Positives = 33/36 (91%)
 Frame = -3

Query: 462 LAYNSHSMKNIFNVRRLDLQAVAASFCFSSPPVTNL 355
           LAYNSHSMK+IFNV RLDLQAVAASFCFSSPP  NL
Sbjct: 497 LAYNSHSMKDIFNVHRLDLQAVAASFCFSSPPKVNL 532



 Score = 23.1 bits (48), Expect(2) = 1e-10
 Identities = 9/12 (75%), Positives = 12/12 (100%)
 Frame = -2

Query: 352 IDSNASKFRKKS 317
           ++SNASKFRKK+
Sbjct: 534 MESNASKFRKKT 545


>ref|XP_002529205.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223531323|gb|EEF33161.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 590

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 42/78 (53%), Positives = 47/78 (60%), Gaps = 10/78 (12%)
 Frame = -3

Query: 462 LAYNSHSMKNIFNVRRLDLQAVAASFCFSSPPVTNLI*TAMLPSSGKKAILGKQ------ 301
           LAYNSHSMK+IFNV RLDLQAVAASFCFS PP  NL   +      KKA  G +      
Sbjct: 513 LAYNSHSMKDIFNVHRLDLQAVAASFCFSCPPKVNLNIDSNASKFRKKAHKGSRNGFSES 572

Query: 300 ----PQRIR*YTRQFLRY 259
                QR    TRQF+R+
Sbjct: 573 NPYGRQRDEDNTRQFVRH 590


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