BLASTX nr result
ID: Lithospermum22_contig00019340
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00019340
(1458 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABA95319.1| retrotransposon protein, putative, unclassified [... 148 3e-33
gb|ABF98227.1| retrotransposon protein, putative, unclassified [... 147 9e-33
gb|AAP68389.1| putative polyprotein [Oryza sativa Japonica Group] 147 9e-33
emb|CAD41876.2| OSJNBa0041A02.23 [Oryza sativa Japonica Group] 145 3e-32
emb|CAH66715.1| OSIGBa0118P15.5 [Oryza sativa Indica Group] 144 6e-32
>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 955
Score = 148 bits (374), Expect = 3e-33
Identities = 74/163 (45%), Positives = 102/163 (62%)
Frame = -2
Query: 665 EAREILQQRRQITKWIKQNLQQVQSRMKMFVDTKRTDREFVEGDLVYLKLQPYRQNSLSL 486
EAR L+++ I + +K +++ Q RMK + D RT+R+ GD+VYLKLQPYRQN+ +
Sbjct: 777 EARVTLEEKETIVQKLKASMEDAQRRMKYYADRNRTERKLEVGDMVYLKLQPYRQNAFGI 836
Query: 485 RKHLKLAVKYYGPFKIIQRIGPVEYKRKFPETSRIHPVFHVSLLKKCIKRTLEIQKELPE 306
R LKL KYYGPFK+++++G V Y+ + PE + IHPVFHVS LKK + LP
Sbjct: 837 RGSLKLRGKYYGPFKVLEKVGAVAYRLQLPEEAAIHPVFHVSQLKKHLGTHAVPMPNLPA 896
Query: 305 TLPDGSFPMYPVTVLNKRTILRNKIYVHQLLIQWKHSSLKDAT 177
PDG PV VL +R I RN + V Q LI W + + +AT
Sbjct: 897 VGPDGQIKTEPVAVLQRRMIPRNNVAVTQWLILWSNLTPAEAT 939
Score = 76.3 bits (186), Expect = 2e-11
Identities = 31/59 (52%), Positives = 41/59 (69%)
Frame = -1
Query: 1251 VRCMCSDRPQDWSKWFPLAEYWYNTNYHSSLKMTPFEALYGYKPPILSTTHYLEDVNTE 1075
+RCM PQ+W W LAE+WYNT YH++++MTPF+ALYGY PP +S DV+ E
Sbjct: 719 LRCMTFQEPQNWCSWIALAEWWYNTTYHTAIQMTPFKALYGYSPPQISEFSVPCDVSQE 777
Score = 59.3 bits (142), Expect = 2e-06
Identities = 29/49 (59%), Positives = 35/49 (71%)
Frame = -2
Query: 1457 QKSKHELVPSPGLLNPVTIPTSVWSQISMNFVEGLPKSRNMDNIHVVVD 1311
Q +K E V PGLLNP+ +P W+ ISM+FVEGLPKS+ D I VVVD
Sbjct: 584 QVTKSEHVHIPGLLNPLEVPDMAWTHISMDFVEGLPKSKGKDVILVVVD 632
>gb|ABF98227.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1160
Score = 147 bits (370), Expect = 9e-33
Identities = 76/163 (46%), Positives = 105/163 (64%)
Frame = -2
Query: 665 EAREILQQRRQITKWIKQNLQQVQSRMKMFVDTKRTDREFVEGDLVYLKLQPYRQNSLSL 486
EAR +QQR + +K+NL + Q+R+K VD R++R+F GD+VYLK+QPYRQN+ L
Sbjct: 982 EARATVQQREDMLARLKENLAKAQTRIKKLVDRLRSERQFELGDMVYLKMQPYRQNAFGL 1041
Query: 485 RKHLKLAVKYYGPFKIIQRIGPVEYKRKFPETSRIHPVFHVSLLKKCIKRTLEIQKELPE 306
R LKL K+YGPF+++++IG V YK + PE + IHPVFHVS LKK + R LP
Sbjct: 1042 RGSLKLRAKFYGPFRVLEKIGKVAYKLQLPEEANIHPVFHVSQLKKHVGRQAIPLPNLPL 1101
Query: 305 TLPDGSFPMYPVTVLNKRTILRNKIYVHQLLIQWKHSSLKDAT 177
DG+ P+ VL +R I R V Q LI W++ + +DAT
Sbjct: 1102 VGADGTVKTEPLAVLARRVIPRQNEPVVQWLIHWENLTPEDAT 1144
Score = 64.3 bits (155), Expect(2) = 2e-18
Identities = 23/48 (47%), Positives = 35/48 (72%)
Frame = -1
Query: 1260 QREVRCMCSDRPQDWSKWFPLAEYWYNTNYHSSLKMTPFEALYGYKPP 1117
Q ++ + P++W KW P AE+WYNT+YH+SL++T +EA+YG PP
Sbjct: 921 QDVIQVFMENEPKEWYKWLPTAEWWYNTSYHTSLQVTSYEAMYGVTPP 968
Score = 55.5 bits (132), Expect(2) = 2e-18
Identities = 27/49 (55%), Positives = 34/49 (69%)
Frame = -2
Query: 1457 QKSKHELVPSPGLLNPVTIPTSVWSQISMNFVEGLPKSRNMDNIHVVVD 1311
Q +K E + PGLL+P+ IP W+ ISM+F+EGLPKS D I VVVD
Sbjct: 855 QIAKPEHIHVPGLLDPLQIPEMAWTHISMDFIEGLPKSHGKDVILVVVD 903
>gb|AAP68389.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1246
Score = 147 bits (370), Expect = 9e-33
Identities = 76/163 (46%), Positives = 105/163 (64%)
Frame = -2
Query: 665 EAREILQQRRQITKWIKQNLQQVQSRMKMFVDTKRTDREFVEGDLVYLKLQPYRQNSLSL 486
EAR +QQR + +K+NL + Q+R+K VD R++R+F GD+VYLK+QPYRQN+ L
Sbjct: 1068 EARATVQQREDMLARLKENLAKAQTRIKKLVDRLRSERQFELGDMVYLKMQPYRQNAFGL 1127
Query: 485 RKHLKLAVKYYGPFKIIQRIGPVEYKRKFPETSRIHPVFHVSLLKKCIKRTLEIQKELPE 306
R LKL K+YGPF+++++IG V YK + PE + IHPVFHVS LKK + R LP
Sbjct: 1128 RGSLKLRAKFYGPFRVLEKIGKVAYKLQLPEEANIHPVFHVSQLKKHVGRQAIPLPNLPL 1187
Query: 305 TLPDGSFPMYPVTVLNKRTILRNKIYVHQLLIQWKHSSLKDAT 177
DG+ P+ VL +R I R V Q LI W++ + +DAT
Sbjct: 1188 VGADGTVKTEPLAVLARRVIPRQNEPVVQWLIHWENLTPEDAT 1230
Score = 64.3 bits (155), Expect(2) = 2e-18
Identities = 23/48 (47%), Positives = 35/48 (72%)
Frame = -1
Query: 1260 QREVRCMCSDRPQDWSKWFPLAEYWYNTNYHSSLKMTPFEALYGYKPP 1117
Q ++ + P++W KW P AE+WYNT+YH+SL++T +EA+YG PP
Sbjct: 1007 QDVIQVFMENEPKEWYKWLPTAEWWYNTSYHTSLQVTSYEAMYGVTPP 1054
Score = 55.5 bits (132), Expect(2) = 2e-18
Identities = 27/49 (55%), Positives = 34/49 (69%)
Frame = -2
Query: 1457 QKSKHELVPSPGLLNPVTIPTSVWSQISMNFVEGLPKSRNMDNIHVVVD 1311
Q +K E + PGLL+P+ IP W+ ISM+F+EGLPKS D I VVVD
Sbjct: 941 QIAKPEHIHVPGLLDPLQIPEMAWTHISMDFIEGLPKSHGKDVILVVVD 989
>emb|CAD41876.2| OSJNBa0041A02.23 [Oryza sativa Japonica Group]
Length = 1373
Score = 145 bits (365), Expect = 3e-32
Identities = 75/166 (45%), Positives = 103/166 (62%)
Frame = -2
Query: 674 IITEAREILQQRRQITKWIKQNLQQVQSRMKMFVDTKRTDREFVEGDLVYLKLQPYRQNS 495
+ E R QQR ++ +K NL + Q+R++ F D R++R F EGD+VYLK+QPYRQN+
Sbjct: 1192 VTEEIRITAQQREELMLRLKDNLLRAQNRIRKFADRLRSERSFQEGDMVYLKMQPYRQNA 1251
Query: 494 LSLRKHLKLAVKYYGPFKIIQRIGPVEYKRKFPETSRIHPVFHVSLLKKCIKRTLEIQKE 315
LR LKL K+YGPF+I++RIG V Y + PE + IHPVFHVS LKK + +
Sbjct: 1252 FGLRGSLKLRAKFYGPFRILKRIGKVAYHLQLPEEAGIHPVFHVSQLKKHVGNLVVPLPN 1311
Query: 314 LPETLPDGSFPMYPVTVLNKRTILRNKIYVHQLLIQWKHSSLKDAT 177
LP DG+ PV VL +R + R V Q L+ W++ S +DAT
Sbjct: 1312 LPLVDEDGNIKTEPVAVLARRVVPRRNEPVTQWLVHWENLSPEDAT 1357
>emb|CAH66715.1| OSIGBa0118P15.5 [Oryza sativa Indica Group]
Length = 1434
Score = 144 bits (363), Expect = 6e-32
Identities = 75/166 (45%), Positives = 102/166 (61%)
Frame = -2
Query: 674 IITEAREILQQRRQITKWIKQNLQQVQSRMKMFVDTKRTDREFVEGDLVYLKLQPYRQNS 495
+ E R QQR ++ +K NL + Q+R+K F D R++R F EGD+VYLK+QPYRQN+
Sbjct: 1269 VTEEIRITAQQREELMLRLKDNLLRAQNRIKKFADRLRSERSFQEGDMVYLKMQPYRQNT 1328
Query: 494 LSLRKHLKLAVKYYGPFKIIQRIGPVEYKRKFPETSRIHPVFHVSLLKKCIKRTLEIQKE 315
LR LKL K+YGPF+I++RIG V Y + PE + IHPVFHVS LKK +
Sbjct: 1329 FGLRGSLKLRAKFYGPFRILKRIGKVAYHLQLPEEAGIHPVFHVSQLKKHVGNLAVPLPN 1388
Query: 314 LPETLPDGSFPMYPVTVLNKRTILRNKIYVHQLLIQWKHSSLKDAT 177
LP DG+ PV VL +R + R V Q L+ W++ + +DAT
Sbjct: 1389 LPLVDEDGNIKAEPVAVLARRVVPRRNEPVTQWLVHWENLTPEDAT 1434
Score = 75.1 bits (183), Expect(2) = 2e-22
Identities = 28/45 (62%), Positives = 36/45 (80%)
Frame = -1
Query: 1251 VRCMCSDRPQDWSKWFPLAEYWYNTNYHSSLKMTPFEALYGYKPP 1117
+RCM P+DW KW P AE+WYNT+YH+SL++TP+EALYG PP
Sbjct: 1214 LRCMVFQEPRDWHKWLPTAEWWYNTSYHTSLQVTPYEALYGVHPP 1258
Score = 58.5 bits (140), Expect(2) = 2e-22
Identities = 40/108 (37%), Positives = 53/108 (49%), Gaps = 39/108 (36%)
Frame = -2
Query: 1457 QKSKHELVPSPGLLNPVTIPTSVWSQISMNFVEGLPKSRN----MDNIH--------VVV 1314
Q +K E V SPGLL+P+ IP W+ ISM+F+EGLPKS+ M+N++ +V
Sbjct: 1108 QITKAEHVHSPGLLDPLQIPEMAWTHISMDFIEGLPKSQGKDIFMENVYRLHGMPLVIVF 1167
Query: 1313 DSHK---------------------------SDGQTERVNQSLETNVR 1251
D K SDGQTERVNQ +E +R
Sbjct: 1168 DRDKIFTSDLFQNVFKSMGTTLRFSTSYHPQSDGQTERVNQCVEAYLR 1215