BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00019321
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAM28750.1| reverse transcriptase-like protein, partial [Cam...    54   7e-22
dbj|BAM28751.1| reverse transcriptase-like protein, partial [Cam...    55   2e-21
gb|AAF18538.1|AC006551_24 Very similar to retrotransposon revers...    50   5e-20
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...    52   1e-19
emb|CAN77449.1| hypothetical protein VITISV_016970 [Vitis vinifera]    57   2e-19

>dbj|BAM28750.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
           sinensis]
          Length = 255

 Score = 53.9 bits (128), Expect(3) = 7e-22
 Identities = 22/45 (48%), Positives = 29/45 (64%)
 Frame = +3

Query: 3   FL*KTNKEIFIMSVLQSIPTFTMQCFRIPIQTCKAINSILANFWW 137
           FL    +E+ I SV Q+IPT+ M CFR+P   C  I S++ NFWW
Sbjct: 32  FLSVAGREVLIKSVAQAIPTYIMSCFRLPDGVCHEIESMVCNFWW 76



 Score = 50.8 bits (120), Expect(3) = 7e-22
 Identities = 21/47 (44%), Positives = 30/47 (63%)
 Frame = +1

Query: 256 QAWRLITEPNHHLSRSLKARYYHDGDFFSAKLGSSPSFTWKSLLSIR 396
           Q WRL+  P   ++R  KARY+    F  A +GS+PSFTW+S++  R
Sbjct: 118 QCWRLVQRPQSLVARVFKARYFPQTSFLDALVGSNPSFTWRSIVGSR 164



 Score = 43.9 bits (102), Expect(3) = 7e-22
 Identities = 20/34 (58%), Positives = 23/34 (67%)
 Frame = +2

Query: 158 KIH*IAWDQLCKSKEEEGLGFRRTQDFNQTLLCK 259
           KIH  +W QLCKSK + G+GFR  Q FN  LL K
Sbjct: 84  KIHWTSWKQLCKSKLQGGMGFRCLQXFNSALLAK 117


>dbj|BAM28751.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
           sinensis]
          Length = 255

 Score = 54.7 bits (130), Expect(3) = 2e-21
 Identities = 21/40 (52%), Positives = 28/40 (70%)
 Frame = +3

Query: 21  KEIFIMSVLQSIPTFTMQCFRIPIQTCKAINSILANFWWG 140
           +E+ I SV Q+IPT+ M CFR+P   C  I S++ NFWWG
Sbjct: 38  REVLIKSVAQAIPTYIMSCFRLPDGVCXEIESMVCNFWWG 77



 Score = 49.3 bits (116), Expect(3) = 2e-21
 Identities = 21/47 (44%), Positives = 29/47 (61%)
 Frame = +1

Query: 256 QAWRLITEPNHHLSRSLKARYYHDGDFFSAKLGSSPSFTWKSLLSIR 396
           Q WRL   P   ++R  KARY+    F  A +GS+PSFTW+S++  R
Sbjct: 118 QCWRLXQRPQSLVARVFKARYFPQTSFLDALVGSNPSFTWRSIVGSR 164



 Score = 43.1 bits (100), Expect(3) = 2e-21
 Identities = 20/34 (58%), Positives = 22/34 (64%)
 Frame = +2

Query: 158 KIH*IAWDQLCKSKEEEGLGFRRTQDFNQTLLCK 259
           KIH  +W QLCKSK   G+GFR  Q FN  LL K
Sbjct: 84  KIHWTSWKQLCKSKLRGGMGFRCLQHFNSALLAK 117


>gb|AAF18538.1|AC006551_24 Very similar to retrotransposon reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1231

 Score = 50.4 bits (119), Expect(3) = 5e-20
 Identities = 22/48 (45%), Positives = 33/48 (68%)
 Frame = +1

Query: 256 QAWRLITEPNHHLSRSLKARYYHDGDFFSAKLGSSPSFTWKSLLSIRD 399
           QAWRL+  P+   +R +K+RY+  G+F  + +GS PSF W+S+L  RD
Sbjct: 717 QAWRLLQFPDCLFARLIKSRYFPVGEFLDSDVGSRPSFGWRSILHGRD 764



 Score = 49.7 bits (117), Expect(3) = 5e-20
 Identities = 18/47 (38%), Positives = 29/47 (61%)
 Frame = +3

Query: 21  KEIFIMSVLQSIPTFTMQCFRIPIQTCKAINSILANFWWGLGTYNKK 161
           KEI + +V  ++P F M CF++P  TC  + S +A+FWW    + +K
Sbjct: 637 KEIMLKAVAMAMPVFAMSCFKLPKTTCTNLASAMADFWWSANDHQRK 683



 Score = 42.4 bits (98), Expect(3) = 5e-20
 Identities = 21/40 (52%), Positives = 25/40 (62%)
 Frame = +2

Query: 158 KIH*IAWDQLCKSKEEEGLGFRRTQDFNQTLLCKHGDLLL 277
           KIH ++W++LC  KE  GLGFR    FNQ LL K    LL
Sbjct: 683 KIHWLSWEKLCLPKEHGGLGFRDIGLFNQALLAKQAWRLL 722


>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score = 51.6 bits (122), Expect(3) = 1e-19
 Identities = 21/43 (48%), Positives = 28/43 (65%)
 Frame = +3

Query: 12   KTNKEIFIMSVLQSIPTFTMQCFRIPIQTCKAINSILANFWWG 140
            K  KE+ I +V Q+IP +TM  F++P  T  AIN  +A FWWG
Sbjct: 1074 KAGKEVLIKTVAQAIPNYTMSVFQLPAGTSDAINKCVARFWWG 1116



 Score = 50.8 bits (120), Expect(3) = 1e-19
 Identities = 22/44 (50%), Positives = 31/44 (70%)
 Frame = +1

Query: 256  QAWRLITEPNHHLSRSLKARYYHDGDFFSAKLGSSPSFTWKSLL 387
            Q WRL+  P+  ++R LKA+Y+   DF  A+LGSSPS+ W+S L
Sbjct: 1156 QGWRLMMYPDSLVARMLKAKYFPWDDFMEAELGSSPSYLWRSFL 1199



 Score = 38.5 bits (88), Expect(3) = 1e-19
 Identities = 19/35 (54%), Positives = 21/35 (60%)
 Frame = +2

Query: 161  IH*IAWDQLCKSKEEEGLGFRRTQDFNQTLLCKHG 265
            IH   W  LC SK++ GLGFR    FNQ LL K G
Sbjct: 1123 IHWRRWSDLCFSKKDGGLGFRDLSLFNQALLGKQG 1157


>emb|CAN77449.1| hypothetical protein VITISV_016970 [Vitis vinifera]
          Length = 517

 Score = 56.6 bits (135), Expect(3) = 2e-19
 Identities = 25/45 (55%), Positives = 32/45 (71%)
 Frame = +1

Query: 256 QAWRLITEPNHHLSRSLKARYYHDGDFFSAKLGSSPSFTWKSLLS 390
           Q W LIT+P+  ++R LKARYY   DF SA+L  +PSFTWK + S
Sbjct: 271 QGWNLITKPDSLIARLLKARYYCSRDFLSARLSHNPSFTWKGIWS 315



 Score = 45.1 bits (105), Expect(3) = 2e-19
 Identities = 21/43 (48%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
 Frame = +2

Query: 158 KIH*IAWDQLCKSKEEEGLGFRRTQDFNQTLLCKHG-DLLLSP 283
           +I+ ++WD+LC  KEE GLGFR  +DFN  +L K G +L+  P
Sbjct: 237 RINWLSWDKLCLRKEEGGLGFRNLRDFNLAMLGKQGWNLITKP 279



 Score = 38.9 bits (89), Expect(3) = 2e-19
 Identities = 15/43 (34%), Positives = 26/43 (60%)
 Frame = +3

Query: 12  KTNKEIFIMSVLQSIPTFTMQCFRIPIQTCKAINSILANFWWG 140
           +  K+I I  V Q+IP++ M  F +PI   + +  ++ +FWWG
Sbjct: 187 QAGKKILIKVVGQAIPSYCMSTFLLPISLSEELQKMMNSFWWG 229