BLASTX nr result

ID: Lithospermum22_contig00019213 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00019213
         (846 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312714.1| predicted protein [Populus trichocarpa] gi|2...    82   1e-13
ref|XP_002314400.1| predicted protein [Populus trichocarpa] gi|2...    76   8e-12
ref|XP_003541657.1| PREDICTED: uncharacterized protein LOC100779...    76   1e-11
ref|XP_002269710.1| PREDICTED: classical arabinogalactan protein...    74   4e-11
ref|XP_002882137.1| hypothetical protein ARALYDRAFT_904270 [Arab...    68   2e-09

>ref|XP_002312714.1| predicted protein [Populus trichocarpa] gi|222852534|gb|EEE90081.1|
           predicted protein [Populus trichocarpa]
          Length = 194

 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 57/121 (47%), Positives = 72/121 (59%), Gaps = 15/121 (12%)
 Frame = +2

Query: 167 MASFFPFTTITIIMVFLFPSANS-------NLLMSTPTIVAAPAVFPESPLASPPPSFQE 325
           MASF+ F T  I+ + +FPS +S       N   S   I  +PA    SP   P P FQE
Sbjct: 1   MASFW-FLTALIVPLVIFPSPSSSSSSTQLNSKTSPYPISTSPAFLTNSP---PIPPFQE 56

Query: 326 LSPDITPLLPSPLGGVVE-------PTIPSSLGPPNPDDDMI-GPDSAYAPDGSLQESAA 481
           LSPDI PLLPSP GGV+        PTIPS+  PPNPD+ +  GPDSA++P G+L  S+A
Sbjct: 57  LSPDIAPLLPSP-GGVLPSPTVSSVPTIPSTPSPPNPDEVVASGPDSAFSPLGALLASSA 115

Query: 482 S 484
           +
Sbjct: 116 A 116


>ref|XP_002314400.1| predicted protein [Populus trichocarpa] gi|222863440|gb|EEF00571.1|
           predicted protein [Populus trichocarpa]
          Length = 132

 Score = 76.3 bits (186), Expect = 8e-12
 Identities = 54/137 (39%), Positives = 75/137 (54%), Gaps = 9/137 (6%)
 Frame = +2

Query: 167 MASFFPFTTITIIMVFLFPSANSNLLMSTPTIVAAPAVFPESPLASPPPS-FQELSPDIT 343
           MASF  F  + I+ + +FP  +S+  +++ T     +  P      PPPS  QELSPDI 
Sbjct: 1   MASFC-FFIVLIVPLMIFPLLSSSTQLNSKTSPYPISTSPPFLTNPPPPSPLQELSPDIA 59

Query: 344 PLLPSPLGGVVE-------PTIPSSLGPPNPDDDMI-GPDSAYAPDGSLQESAASRCFIF 499
           PLLPSP GGV+        PTIPS+  PPNPD+ +  GP SA++P G+L  S+AS     
Sbjct: 60  PLLPSP-GGVLPSPTVSSVPTIPSTPSPPNPDEVVAPGPASAFSPLGALPASSAS----- 113

Query: 500 VGSVYKLALVFGVFCLW 550
             ++   A+  G    W
Sbjct: 114 PRNLINFAIAVGCIAYW 130


>ref|XP_003541657.1| PREDICTED: uncharacterized protein LOC100779758 [Glycine max]
          Length = 151

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 59/152 (38%), Positives = 78/152 (51%), Gaps = 19/152 (12%)
 Frame = +2

Query: 167 MASFFPFTTITIIMVF-------LFPSANSNLLMSTPTIVAAPAVF---PESPLASPPPS 316
           MAS+    T+ +I++        L  S +   +   PT+ ++PA     P SP  S    
Sbjct: 1   MASYNAHLTLMMIIIIIAFMPSPLLSSYSQQPIPKVPTLSSSPATLTDPPPSPHLSSLSP 60

Query: 317 FQELSPDITPLLPSPLGGVVE--------PTIPSSLGPPNPDDDMI-GPDSAYAPDGSLQ 469
           FQELSPDI PLLPSP GGV+         PTIPS+  PPNPDD +  GP SA++P GS  
Sbjct: 61  FQELSPDIAPLLPSP-GGVLPTPAAGSDIPTIPSNPSPPNPDDIIAPGPLSAFSPFGSPL 119

Query: 470 ESAASRCFIFVGSVYKLALVFGVFCLWILHIL 565
            S A    + V S+   A   G+   W LH +
Sbjct: 120 SSNAPTTSL-VASI-ATAFFAGLAVCWCLHCM 149


>ref|XP_002269710.1| PREDICTED: classical arabinogalactan protein 26-like [Vitis
           vinifera]
          Length = 138

 Score = 73.9 bits (180), Expect = 4e-11
 Identities = 57/142 (40%), Positives = 72/142 (50%), Gaps = 9/142 (6%)
 Frame = +2

Query: 164 IMASFFPFTTITIIMVFLFPSANSNLLMSTPTIVAAPAVFPESPLASPPPSFQELSPDIT 343
           ++A F  F TI   + F +      L + T TI A+PA  P  PL+SP PS   LSPDIT
Sbjct: 7   LIAVFMVFITIHSSVAFPY-----QLKLQTSTISASPAYLPNPPLSSPSPS---LSPDIT 58

Query: 344 PLLPSPLGGVVE------PTIPSSLGPPNPDDDMIG-PDSAYAPDGSLQESAASRCFIFV 502
           PL PSP+G  +       PTIPSS  PPNPD      P SA +P G    SA S     +
Sbjct: 59  PLFPSPVGVPLSPAESSLPTIPSSPSPPNPDAVATPVPGSASSPAGHPDSSAFS-----L 113

Query: 503 GSVYKLALVFGV--FCLWILHI 562
            S   LA VF +     W++ +
Sbjct: 114 SSSTPLASVFFLCFLAFWLMQL 135


>ref|XP_002882137.1| hypothetical protein ARALYDRAFT_904270 [Arabidopsis lyrata subsp.
           lyrata] gi|297327976|gb|EFH58396.1| hypothetical protein
           ARALYDRAFT_904270 [Arabidopsis lyrata subsp. lyrata]
          Length = 139

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 44/116 (37%), Positives = 60/116 (51%), Gaps = 12/116 (10%)
 Frame = +2

Query: 185 FTTITIIMVFLFPSANSNLLMSTPTIVAAPAVFPESPL---ASPPPSFQELSPDITPLLP 355
           FT  T++ + L  S +  L +   TI AAP+  PE+P    ASPP     +SPD +PL P
Sbjct: 6   FTAFTVLSLCLHTSTSEFLELQLSTISAAPSFLPEAPSSFSASPPA----ISPDTSPLFP 61

Query: 356 ---------SPLGGVVEPTIPSSLGPPNPDDDMIGPDSAYAPDGSLQESAASRCFI 496
                    SP    + PTIPSSL PPNPD     P   ++P GS   +++S C +
Sbjct: 62  TPGSREMSPSPSESSIMPTIPSSLSPPNPDAVSHDPLLEFSPVGSPLPASSSVCLV 117


Top