BLASTX nr result

ID: Lithospermum22_contig00019201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00019201
         (502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAG31396.1| RIN-like MADS-box protein [Torenia fournieri]          70   1e-16
gb|ABR68644.1| flowering locus C-like MADS-box protein [Vitis la...    66   7e-15
gb|AEG19540.1| flowering locus C-like protein [Vitis labrusca x ...    64   3e-14
gb|ACZ26524.1| flowering locus C [Vitis vinifera]                      64   3e-14
ref|XP_002276141.1| PREDICTED: MADS-box transcription factor 18 ...    64   3e-14

>dbj|BAG31396.1| RIN-like MADS-box protein [Torenia fournieri]
          Length = 196

 Score = 70.5 bits (171), Expect(2) = 1e-16
 Identities = 31/58 (53%), Positives = 47/58 (81%)
 Frame = -2

Query: 183 IKKAKELSILCEVDLGLIILSARGKLFNFTNSNNSLTEIIQRYHNYVELEANESNAIC 10
           +KKAKE+S+LC+VD+ +II+S+RGKL+N+ +SN+SL E +QRYH   E+E   S+ +C
Sbjct: 29  LKKAKEISVLCDVDVAVIIISSRGKLYNY-SSNSSLVETLQRYHRQHEIEPGPSSGVC 85



 Score = 40.4 bits (93), Expect(2) = 1e-16
 Identities = 18/22 (81%), Positives = 22/22 (100%)
 Frame = -1

Query: 328 LEIKRIESKASRQVTFTKRRNG 263
           LEIKRIE+K++RQVTF+KRRNG
Sbjct: 6   LEIKRIENKSARQVTFSKRRNG 27


>gb|ABR68644.1| flowering locus C-like MADS-box protein [Vitis labrusca x Vitis
           vinifera]
          Length = 210

 Score = 65.9 bits (159), Expect(2) = 7e-15
 Identities = 30/61 (49%), Positives = 45/61 (73%)
 Frame = -2

Query: 183 IKKAKELSILCEVDLGLIILSARGKLFNFTNSNNSLTEIIQRYHNYVELEANESNAICET 4
           IKKA+ELS+LC+VD+ +++ S+RGKL+ + N  NSLT I++RY ++ E E N S    E+
Sbjct: 29  IKKARELSVLCDVDVAVLVFSSRGKLYEYAN-GNSLTRILERYQSHFEAEGNASTGANES 87

Query: 3   E 1
           E
Sbjct: 88  E 88



 Score = 39.3 bits (90), Expect(2) = 7e-15
 Identities = 17/22 (77%), Positives = 21/22 (95%)
 Frame = -1

Query: 328 LEIKRIESKASRQVTFTKRRNG 263
           +E+KRIE K+SRQVTF+KRRNG
Sbjct: 6   VELKRIEDKSSRQVTFSKRRNG 27


>gb|AEG19540.1| flowering locus C-like protein [Vitis labrusca x Vitis vinifera]
          Length = 210

 Score = 63.9 bits (154), Expect(2) = 3e-14
 Identities = 30/61 (49%), Positives = 44/61 (72%)
 Frame = -2

Query: 183 IKKAKELSILCEVDLGLIILSARGKLFNFTNSNNSLTEIIQRYHNYVELEANESNAICET 4
           IKKA+ELS+LC+VD+ +++ S+RGKL+   N  NSLT I++RY ++ E E N S    E+
Sbjct: 29  IKKARELSVLCDVDVAVLVFSSRGKLYECAN-GNSLTRILERYQSHFEAEGNASTGANES 87

Query: 3   E 1
           E
Sbjct: 88  E 88



 Score = 39.3 bits (90), Expect(2) = 3e-14
 Identities = 17/22 (77%), Positives = 21/22 (95%)
 Frame = -1

Query: 328 LEIKRIESKASRQVTFTKRRNG 263
           +E+KRIE K+SRQVTF+KRRNG
Sbjct: 6   VELKRIEDKSSRQVTFSKRRNG 27


>gb|ACZ26524.1| flowering locus C [Vitis vinifera]
          Length = 210

 Score = 63.9 bits (154), Expect(2) = 3e-14
 Identities = 29/61 (47%), Positives = 44/61 (72%)
 Frame = -2

Query: 183 IKKAKELSILCEVDLGLIILSARGKLFNFTNSNNSLTEIIQRYHNYVELEANESNAICET 4
           IKKA+ELS+LC+VD+ +++ S+RGKL+ + N  NSL  I++RY ++ E E N S    E+
Sbjct: 29  IKKARELSVLCDVDVAVLVFSSRGKLYEYAN-GNSLARILERYQSHFEAEGNASTGANES 87

Query: 3   E 1
           E
Sbjct: 88  E 88



 Score = 39.3 bits (90), Expect(2) = 3e-14
 Identities = 17/22 (77%), Positives = 21/22 (95%)
 Frame = -1

Query: 328 LEIKRIESKASRQVTFTKRRNG 263
           +E+KRIE K+SRQVTF+KRRNG
Sbjct: 6   VELKRIEDKSSRQVTFSKRRNG 27


>ref|XP_002276141.1| PREDICTED: MADS-box transcription factor 18 [Vitis vinifera]
          Length = 210

 Score = 63.9 bits (154), Expect(2) = 3e-14
 Identities = 29/61 (47%), Positives = 44/61 (72%)
 Frame = -2

Query: 183 IKKAKELSILCEVDLGLIILSARGKLFNFTNSNNSLTEIIQRYHNYVELEANESNAICET 4
           IKKA+ELS+LC+VD+ +++ S+RGKL+ + N  NSL  I++RY ++ E E N S    E+
Sbjct: 29  IKKARELSVLCDVDVAVLVFSSRGKLYEYAN-GNSLARILERYQSHFEAEGNASTGANES 87

Query: 3   E 1
           E
Sbjct: 88  E 88



 Score = 39.3 bits (90), Expect(2) = 3e-14
 Identities = 17/22 (77%), Positives = 21/22 (95%)
 Frame = -1

Query: 328 LEIKRIESKASRQVTFTKRRNG 263
           +E+KRIE K+SRQVTF+KRRNG
Sbjct: 6   VELKRIEDKSSRQVTFSKRRNG 27


Top