BLASTX nr result

ID: Lithospermum22_contig00019198 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00019198
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_006503804.1| component of cytochrome b6/f complex (chloro...   268   4e-70
gb|AER52671.1| cytochrome f [Asclepias cutleri] gi|355332068|gb|...   268   4e-70
ref|YP_007353779.1| component of cytochrome b6/f complex (chloro...   267   7e-70
gb|ADD30928.1| cytochrome f protein [Ehretia acuminata]               267   7e-70
ref|YP_004841796.1| cytochrome f [Cucumis melo subsp. melo] gi|1...   266   1e-69

>ref|YP_006503804.1| component of cytochrome b6/f complex (chloroplast) [Datura
           stramonium] gi|350996439|gb|AEQ36951.1| component of
           cytochrome b6/f complex (chloroplast) [Datura
           stramonium] gi|350996525|gb|AEQ37036.1| component of
           cytochrome b6/f complex [Datura stramonium]
          Length = 320

 Score =  268 bits (684), Expect = 4e-70
 Identities = 134/139 (96%), Positives = 138/139 (99%)
 Frame = -1

Query: 418 EQITRSISVSLMIYIITWTSISSAYPIFAQQGYENPREATGRIVCANCHLANKPVEIEVP 239
           +QITRSISVSLMIYI+T TSISSAYPIFAQQGYENPREATGRIVCANCHLANKPVEIEVP
Sbjct: 12  KQITRSISVSLMIYILTRTSISSAYPIFAQQGYENPREATGRIVCANCHLANKPVEIEVP 71

Query: 238 QAVLPDTVFEAVVRIPYDMQLKQVLANGKKGGLNVGAVLILPEGFELAPPDRISPELKEK 59
           QAVLPDTVFEAVVRIPYDMQLKQVLANGKKGGLNVGAVLILPEGFELAPPDRISPE+KEK
Sbjct: 72  QAVLPDTVFEAVVRIPYDMQLKQVLANGKKGGLNVGAVLILPEGFELAPPDRISPEMKEK 131

Query: 58  MGNLSFQSYRPNKKNILVV 2
           +GNLSFQSYRPNKKNILVV
Sbjct: 132 IGNLSFQSYRPNKKNILVV 150


>gb|AER52671.1| cytochrome f [Asclepias cutleri] gi|355332068|gb|AER52753.1|
           cytochrome f [Asclepias cutleri]
          Length = 320

 Score =  268 bits (684), Expect = 4e-70
 Identities = 133/139 (95%), Positives = 138/139 (99%)
 Frame = -1

Query: 418 EQITRSISVSLMIYIITWTSISSAYPIFAQQGYENPREATGRIVCANCHLANKPVEIEVP 239
           EQITRSISVSLMIYIIT TSIS+AYPIFAQQGYENPREATGRIVCANCHLANKPV+IEVP
Sbjct: 12  EQITRSISVSLMIYIITQTSISNAYPIFAQQGYENPREATGRIVCANCHLANKPVDIEVP 71

Query: 238 QAVLPDTVFEAVVRIPYDMQLKQVLANGKKGGLNVGAVLILPEGFELAPPDRISPELKEK 59
           QAVLPDTVFEAVVRIPYDMQLKQVLANGKKGGLNVGAVLILPEGFELAPPDRISPE+KEK
Sbjct: 72  QAVLPDTVFEAVVRIPYDMQLKQVLANGKKGGLNVGAVLILPEGFELAPPDRISPEMKEK 131

Query: 58  MGNLSFQSYRPNKKNILVV 2
           +GNLSFQSYRPNKKNILV+
Sbjct: 132 IGNLSFQSYRPNKKNILVI 150


>ref|YP_007353779.1| component of cytochrome b6/f complex (chloroplast) [Chrysanthemum x
           morifolium] gi|452849064|ref|YP_007474742.1| component
           of cytochrome b6/f complex (chloroplast) [Chrysanthemum
           indicum] gi|372863219|gb|AEX99291.1| component of
           cytochrome b6/f complex (chloroplast) [Chrysanthemum
           indicum] gi|372863458|gb|AEX99527.1| component of
           cytochrome b6/f complex (chloroplast) [Chrysanthemum
           indicum] gi|375298848|gb|AFA45287.1| component of
           cytochrome b6/f complex (chloroplast) [Chrysanthemum x
           morifolium]
          Length = 320

 Score =  267 bits (682), Expect = 7e-70
 Identities = 132/139 (94%), Positives = 138/139 (99%)
 Frame = -1

Query: 418 EQITRSISVSLMIYIITWTSISSAYPIFAQQGYENPREATGRIVCANCHLANKPVEIEVP 239
           EQITRSIS+SLMIYIIT TSIS+AYPIFAQQGYENPREATGRIVCANCHLANKPV+IEVP
Sbjct: 12  EQITRSISISLMIYIITRTSISNAYPIFAQQGYENPREATGRIVCANCHLANKPVDIEVP 71

Query: 238 QAVLPDTVFEAVVRIPYDMQLKQVLANGKKGGLNVGAVLILPEGFELAPPDRISPELKEK 59
           QAVLPDTVFEAVVRIPYDMQLKQVLANGKKGGLNVGAVLILPEGFELAPPDRISPE+KEK
Sbjct: 72  QAVLPDTVFEAVVRIPYDMQLKQVLANGKKGGLNVGAVLILPEGFELAPPDRISPEIKEK 131

Query: 58  MGNLSFQSYRPNKKNILVV 2
           MGNLSFQSYRPN+KNILV+
Sbjct: 132 MGNLSFQSYRPNQKNILVI 150


>gb|ADD30928.1| cytochrome f protein [Ehretia acuminata]
          Length = 320

 Score =  267 bits (682), Expect = 7e-70
 Identities = 134/139 (96%), Positives = 137/139 (98%)
 Frame = -1

Query: 418 EQITRSISVSLMIYIITWTSISSAYPIFAQQGYENPREATGRIVCANCHLANKPVEIEVP 239
           EQITRSISVSLMIYIIT T IS+AYPIFAQQGYENPREATGRIVCANCHLANKPVEIEVP
Sbjct: 12  EQITRSISVSLMIYIITRTYISNAYPIFAQQGYENPREATGRIVCANCHLANKPVEIEVP 71

Query: 238 QAVLPDTVFEAVVRIPYDMQLKQVLANGKKGGLNVGAVLILPEGFELAPPDRISPELKEK 59
           QAVLPDTVFEAVVRIPYDMQLKQVLANGKKGGLNVGAVLILPEGFELAPPDRISPELKEK
Sbjct: 72  QAVLPDTVFEAVVRIPYDMQLKQVLANGKKGGLNVGAVLILPEGFELAPPDRISPELKEK 131

Query: 58  MGNLSFQSYRPNKKNILVV 2
           +GNLSFQSYRPNKKNILV+
Sbjct: 132 IGNLSFQSYRPNKKNILVI 150


>ref|YP_004841796.1| cytochrome f [Cucumis melo subsp. melo]
           gi|122238741|sp|Q2QD76.1|CYF_CUCSA RecName:
           Full=Apocytochrome f; Flags: Precursor
           gi|74027114|gb|AAZ94664.1| cytochrome f [Cucumis
           sativus] gi|115432817|gb|ABI97430.1| cytochrome f
           [Cucumis sativus] gi|115498316|gb|ABI98758.1| cytochrome
           f [Cucumis sativus] gi|344030504|gb|AEM76905.1|
           cytochrome f [Cucumis melo subsp. melo]
          Length = 320

 Score =  266 bits (681), Expect = 1e-69
 Identities = 130/139 (93%), Positives = 136/139 (97%)
 Frame = -1

Query: 418 EQITRSISVSLMIYIITWTSISSAYPIFAQQGYENPREATGRIVCANCHLANKPVEIEVP 239
           E+ITRSISVSLMIYIITW  +S+AYPIFAQQGYENPREATGRIVCANCHLANKPV+IEVP
Sbjct: 12  EEITRSISVSLMIYIITWAPVSNAYPIFAQQGYENPREATGRIVCANCHLANKPVDIEVP 71

Query: 238 QAVLPDTVFEAVVRIPYDMQLKQVLANGKKGGLNVGAVLILPEGFELAPPDRISPELKEK 59
           QAVLPDTVFEAVVRIPYDMQLKQVLANGKKGGLNVGAVLILPEGFELAPPDRISPE+KEK
Sbjct: 72  QAVLPDTVFEAVVRIPYDMQLKQVLANGKKGGLNVGAVLILPEGFELAPPDRISPEIKEK 131

Query: 58  MGNLSFQSYRPNKKNILVV 2
           MGNLSFQSYRP KKNILV+
Sbjct: 132 MGNLSFQSYRPTKKNILVI 150


Top