BLASTX nr result

ID: Lithospermum22_contig00019169 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00019169
         (2170 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...   128   3e-42
ref|XP_002468588.1| hypothetical protein SORBIDRAFT_01g048580 [S...   135   2e-40
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...   129   6e-39
ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [S...   127   6e-39
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...   121   2e-38

>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score =  128 bits (322), Expect(2) = 3e-42
 Identities = 66/195 (33%), Positives = 115/195 (58%)
 Frame = +1

Query: 1516 WGSEENERKIHCIA*HTLCTSKKDGGLGFKDTQAFNKALLCKQAWRILSDPNNQLSKVYK 1695
            WGS + +R+IH     +LCT K  GG+GF+D + FN ALL +QAWR++ +P++ L++V K
Sbjct: 831  WGSSDTQRRIHWKNWDSLCTLKCFGGMGFRDLRVFNDALLGRQAWRLVREPHSLLARVMK 890

Query: 1696 ARYFSHGDFWTTTLSTKSRYI*GILLPVRDLISKGINWKLASGNNIRVWGNRWVQHTNSK 1875
            A+Y+S+ DF    L   + Y    +   + L+ +G+ W++ +G N+R+W + WV     +
Sbjct: 891  AKYYSNHDFLDAPLGVSTSYSWRSIWSSKALLKEGMVWRIGNGTNVRIWEDPWVLDELGR 950

Query: 1876 TVITPENEDYLDLRVANLLDSEIGTWKVDLVRSLFYAIENEAILQMSLAHLDGIDIPTWD 2055
              IT E    L++ V+ L+D +   WKV L+ ++F   + + IL + L+ L   D  TW 
Sbjct: 951  -FITSEKHGNLNM-VSELIDFDRMEWKVSLIETVFNERDIKCILSIPLSSLPLKDELTWA 1008

Query: 2056 CNQQGRFTIQSAYHL 2100
              +   +++++AY L
Sbjct: 1009 FTKNAHYSVKTAYML 1023



 Score = 72.4 bits (176), Expect(2) = 3e-42
 Identities = 41/113 (36%), Positives = 64/113 (56%), Gaps = 11/113 (9%)
 Frame = +2

Query: 1154 LLSHLMFADDTFLVGKASIEEATIFKSILDIYE*RSGHFVRAQKSTILFSRNVQGATKRA 1333
            ++SHL FAD + L  +AS +E  I   IL++YE  SG  +   KS + FS+ V  A K  
Sbjct: 679  VISHLFFADVSLLFTRASRQECAIIVEILNLYEQASGQKINYDKSEVSFSKGVSIAQKEE 738

Query: 1334 LTDMLGMSEVKSHGKYLGLPI-----------TIVDKVKFKVANWKPRLLFTA 1459
            L+++L M +V+ H KYLG+P            +++D++  K+  WK +LL  A
Sbjct: 739  LSNILQMKQVERHMKYLGIPSITGRSRTAIFDSLMDRIWKKLQGWKEKLLSRA 791


>ref|XP_002468588.1| hypothetical protein SORBIDRAFT_01g048580 [Sorghum bicolor]
            gi|241922442|gb|EER95586.1| hypothetical protein
            SORBIDRAFT_01g048580 [Sorghum bicolor]
          Length = 517

 Score =  135 bits (341), Expect(2) = 2e-40
 Identities = 66/201 (32%), Positives = 115/201 (57%)
 Frame = +1

Query: 1516 WGSEENERKIHCIA*HTLCTSKKDGGLGFKDTQAFNKALLCKQAWRILSDPNNQLSKVYK 1695
            W  ++   KIH ++   L  SKK GGLGF+D   FN A+L +QAWRIL +P+    +V K
Sbjct: 251  WSEQDKTNKIHWLSWEKLTLSKKRGGLGFRDLYHFNLAMLARQAWRILIEPDTLCGRVLK 310

Query: 1696 ARYFSHGDFWTTTLSTKSRYI*GILLPVRDLISKGINWKLASGNNIRVWGNRWVQHTNSK 1875
            ARYF + +           Y    ++   +L+ +GI W++ SG+N+ +W + W+    ++
Sbjct: 311  ARYFPNSNILQCKARAGILYTWRSIIDGINLLKEGIIWRIGSGSNVNIWTDPWIPRGTTR 370

Query: 1876 TVITPENEDYLDLRVANLLDSEIGTWKVDLVRSLFYAIENEAILQMSLAHLDGIDIPTWD 2055
              ITP    YL  +V++L++   GTW  +L+  +F+  + EAIL +   + + +D P W 
Sbjct: 371  KPITPRGR-YLITKVSDLINPSTGTWDENLISDVFWPEDAEAILMIPTDY-EAVDWPAWH 428

Query: 2056 CNQQGRFTIQSAYHLIMRLEE 2118
             + +G F+++SAY L +++ +
Sbjct: 429  YDSKGVFSVKSAYKLAVQIRD 449



 Score = 58.9 bits (141), Expect(2) = 2e-40
 Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 11/112 (9%)
 Frame = +2

Query: 1157 LSHLMFADDTFLVGKASIEEATIFKSILDIYE*RSGHFVRAQKSTILFSRNVQGATKRAL 1336
            ++HL FADD+ ++ +A  E+A   K IL+IYE  SG  +   KS+I+FS N     K  +
Sbjct: 100  VNHLFFADDSLMLMRARKEDAHELKHILEIYERASGQVINKDKSSIMFSPNTSDYFKGKM 159

Query: 1337 TDMLGMSEVKSHGKYLGLPIT-----------IVDKVKFKVANWKPRLLFTA 1459
               L + +     KYLG PI+           I  ++  ++  W+ +LL  A
Sbjct: 160  RKELSIMQEARSEKYLGGPISTGKSRKKAFEYIKQRIWARIQGWQEKLLSKA 211


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
            At1g65750-like [Vitis vinifera]
          Length = 820

 Score =  129 bits (324), Expect(2) = 6e-39
 Identities = 62/193 (32%), Positives = 106/193 (54%)
 Frame = +1

Query: 1516 WGSEENERKIHCIA*HTLCTSKKDGGLGFKDTQAFNKALLCKQAWRILSDPNNQLSKVYK 1695
            W S    R I  ++   +C  KKDGGLGF+    FN ALL KQ WR L +P++ ++++++
Sbjct: 295  WDSNPQCRSIRWMSWGKMCKQKKDGGLGFRKLXDFNLALLAKQGWRFLRNPDSLVTRIFQ 354

Query: 1696 ARYFSHGDFWTTTLSTKSRYI*GILLPVRDLISKGINWKLASGNNIRVWGNRWVQHTNSK 1875
            ARYF +  F    L +   Y+   +L  + L+ +G  W +ASG  ++VWG+ W+  ++++
Sbjct: 355  ARYFRNSSFLNAELGSNPSYMWRSILAAQGLLKRGCYWSIASGTKVQVWGDSWLPDSSNR 414

Query: 1876 TVITPENEDYLDLRVANLLDSEIGTWKVDLVRSLFYAIENEAILQMSLAHLDGIDIPTWD 2055
             +ITP    +  ++V  L+    G W+ D +R  F A + + IL + L      D  +W 
Sbjct: 415  LIITPPVAGFDGIKVDELITE--GLWREDFIRDKFMARDADLILSIPLPMSSREDQISWS 472

Query: 2056 CNQQGRFTIQSAY 2094
             + +G +T +S Y
Sbjct: 473  FDARGEYTARSGY 485



 Score = 60.5 bits (145), Expect(2) = 6e-39
 Identities = 38/110 (34%), Positives = 51/110 (46%), Gaps = 11/110 (10%)
 Frame = +2

Query: 1163 HLMFADDTFLVGKASIEEATIFKSILDIYE*RSGHFVRAQKSTILFSRNVQGATKRALTD 1342
            HL FADD +L  KA+  E+   K IL  Y+  SG  +   KS + FSRN     KR +  
Sbjct: 146  HLFFADDLYLFFKATESESRSLKQILLRYQNLSGQEINLNKSALTFSRNTDDVVKRGICS 205

Query: 1343 MLGMSEVKSHGKYLGLPITIVD-----------KVKFKVANWKPRLLFTA 1459
            +L + E    G YLG+P  +             KV  ++ NW  R L  A
Sbjct: 206  ILQVEEXADPGIYLGMPAVVGKNKRQLFEFVRRKVWNRIQNWNGRRLSRA 255


>ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [Sorghum bicolor]
            gi|241926916|gb|EES00061.1| hypothetical protein
            SORBIDRAFT_03g001780 [Sorghum bicolor]
          Length = 631

 Score =  127 bits (320), Expect(2) = 6e-39
 Identities = 68/202 (33%), Positives = 111/202 (54%), Gaps = 1/202 (0%)
 Frame = +1

Query: 1516 WGSEENERKIHCIA*HTLCTSKKDGGLGFKDTQAFNKALLCKQAWRILSDPNNQLSKVYK 1695
            W  ++   KIH I+   L  SK+ GGLGF+D   FN A+L +QAWR+L++P++   +V K
Sbjct: 408  WSQQDKANKIHWISWEKLTQSKEKGGLGFRDLHLFNLAMLSRQAWRLLTNPDSLCGQVLK 467

Query: 1696 ARYFSHGDFWTTTLSTKSRYI*GILLPVRDLISKGINWKLASGNNIRVWGNRWVQHTNSK 1875
            ARYF H D    +   +  Y    +L    L+ +GI W++ +G N+++W + W+    ++
Sbjct: 468  ARYFPHSDILHCSPRPRISYTWRSILKGVALLKEGIIWRIGNGKNVKIWEHPWIPKGITR 527

Query: 1876 TVITPENEDYLDLRVANLLDSEIGTWKVDLVRSLFYAIENEAILQMSL-AHLDGIDIPTW 2052
              ITP     L  RV  L++   G W   LV  LF+  + E ILQ+ +  H++  D   W
Sbjct: 528  KPITPRGASLL-TRVNELINPVTGEWDEQLVNDLFWPQDAEEILQIPIDEHME--DWLAW 584

Query: 2053 DCNQQGRFTIQSAYHLIMRLEE 2118
              +  G F+++SAY L + + +
Sbjct: 585  HFDATGLFSVKSAYKLAVSIRD 606



 Score = 62.0 bits (149), Expect(2) = 6e-39
 Identities = 34/112 (30%), Positives = 59/112 (52%), Gaps = 11/112 (9%)
 Frame = +2

Query: 1157 LSHLMFADDTFLVGKASIEEATIFKSILDIYE*RSGHFVRAQKSTILFSRNVQGATKRAL 1336
            ++HL FADD+ ++ +A   +A   + ILD+YE  SG  +  +KS+++FS N     +  +
Sbjct: 257  VNHLFFADDSLILMRARASDALELRRILDVYEKASGQVINKEKSSMMFSPNTGQHDRSLM 316

Query: 1337 TDMLGMSEVKSHGKYLGLPIT-----------IVDKVKFKVANWKPRLLFTA 1459
               L +++  S  KYLGLP+            I  K+  ++  W+ +LL  A
Sbjct: 317  RSNLSITDEASTEKYLGLPVNIGKSRKKPFEYIKKKIWSRIQGWQEKLLSKA 368


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  121 bits (303), Expect(2) = 2e-38
 Identities = 61/200 (30%), Positives = 109/200 (54%)
 Frame = +1

Query: 1516 WGSEENERKIHCIA*HTLCTSKKDGGLGFKDTQAFNKALLCKQAWRILSDPNNQLSKVYK 1695
            W ++E + K+H ++ + L   K  GGLGF+D   FN A+L KQ WR++ DP++  S+V +
Sbjct: 1083 WSNQEKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLR 1142

Query: 1696 ARYFSHGDFWTTTLSTKSRYI*GILLPVRDLISKGINWKLASGNNIRVWGNRWVQHTNSK 1875
            A+YF  GD +    ++   Y    +     ++  G+ W++  G+ I +W + W+    S+
Sbjct: 1143 AKYFPLGDCFRPKQTSNVSYTWRSIQKGLRVLQNGMIWRVGDGSKINIWADPWIPRGWSR 1202

Query: 1876 TVITPENEDYLDLRVANLLDSEIGTWKVDLVRSLFYAIENEAILQMSLAHLDGIDIPTWD 2055
              +TP   + L  +V  L+D   GTW  DL+   F+  E+ A ++    H++  D+  W 
Sbjct: 1203 KPMTPRGAN-LVTKVEELIDPYTGTWDEDLLSQTFWE-EDVAAIKSIPVHVEMEDVLAWH 1260

Query: 2056 CNQQGRFTIQSAYHLIMRLE 2115
             + +G FT++SAY +   +E
Sbjct: 1261 FDARGCFTVKSAYKVQREME 1280



 Score = 67.0 bits (162), Expect(2) = 2e-38
 Identities = 37/112 (33%), Positives = 61/112 (54%), Gaps = 11/112 (9%)
 Frame = +2

Query: 1157 LSHLMFADDTFLVGKASIEEATIFKSILDIYE*RSGHFVRAQKSTILFSRNVQGATKRAL 1336
            +SHL+FADD+ ++ +A+  EA   ++IL IYE  SG  +   KS ++FS N     KRA+
Sbjct: 932  VSHLLFADDSLILCRANGGEAQQLQTILQIYEECSGQVINKDKSAVMFSPNTSSLEKRAV 991

Query: 1337 TDMLGMSEVKSHGKYLGLPITI-----------VDKVKFKVANWKPRLLFTA 1459
               L M    ++ +YLGLP+ +            +++  ++  WK +LL  A
Sbjct: 992  MAALNMQRETTNERYLGLPVFVGRSRTKIFSYLKERIWQRIQGWKEKLLSRA 1043


Top