BLASTX nr result
ID: Lithospermum22_contig00019166
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00019166
(1477 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containi... 698 0.0
ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containi... 665 0.0
ref|XP_003595326.1| Pentatricopeptide repeat-containing protein ... 620 e-175
emb|CBI26320.3| unnamed protein product [Vitis vinifera] 592 e-167
gb|ABA91346.1| pentatricopeptide, putative, expressed [Oryza sat... 507 e-141
>ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containing protein At5g43790-like
[Vitis vinifera]
Length = 590
Score = 698 bits (1802), Expect = 0.0
Identities = 335/476 (70%), Positives = 395/476 (82%)
Frame = +3
Query: 3 WLEHGRTLHAHVLKFLEPPYDPFVQASLLNFYSKSGKVSICRYFFYRISQPDLAAWNSIL 182
WL HGR LH HVLKFLEP DPFVQA+LLN+Y+K GKV CRY F +IS+PDLA+WNSIL
Sbjct: 123 WLRHGRALHTHVLKFLEPTCDPFVQAALLNYYAKCGKVGACRYLFNQISKPDLASWNSIL 182
Query: 183 AAYARNASMIFETNATRFDDSTSLSLEVLHLFSKMQESFIRPNEVTLVALITACADLGAV 362
+AY N+ I E SLSLEVL LF +MQ+S I+ NEVTLVALI+ACA+LGA+
Sbjct: 183 SAYVHNSGAICE--------DVSLSLEVLTLFIEMQKSLIKANEVTLVALISACAELGAL 234
Query: 363 NLGTWAHAYVIKNNLSINRFVGSALITMYANCGCLSLACQLFDQLPLRDKICYNAMIRGL 542
+ G WAH YV+K+NL +N FVG+ALI MY+ CGCL LACQLFDQLP RD +CYNAMI G
Sbjct: 235 SQGAWAHVYVLKHNLKLNHFVGTALIDMYSKCGCLDLACQLFDQLPHRDTLCYNAMIGGF 294
Query: 543 AIHGQGCKALDLFERMEQEGLMPDDVTMLAAMCACSHMGLVDQGFNFFESMINNYGIEPR 722
AIHG G +ALDLF++M EGL PDDVT++ MC+CSH+GLV++G + FESM YG+EP+
Sbjct: 295 AIHGYGHQALDLFKKMTLEGLAPDDVTLVVTMCSCSHVGLVEEGCDVFESMKEVYGVEPK 354
Query: 723 LEHYCCLVDLLGRAGRVKEAEETILSMPMSPNAVLWRSLLGAARVHGNVEVGETSLKNLI 902
LEHY CLVDLLGRAGR++EAEE +L+MPM PNAV+WRSLLGAARVHGN+E+GE LK+LI
Sbjct: 355 LEHYGCLVDLLGRAGRLREAEERVLNMPMKPNAVIWRSLLGAARVHGNLEIGEVVLKHLI 414
Query: 903 QLEPESSGNYVLLSNIYASMSRWDDVKRIRKSMKLHGVNKLPGISIAEVNGAMHEFLIGD 1082
QLEPE+SGNYVLLSN+YAS++RWDDVKR+RK MK HG+NK+PG S+ EV GAMHEFL+GD
Sbjct: 415 QLEPETSGNYVLLSNMYASINRWDDVKRVRKLMKDHGINKVPGSSLVEVGGAMHEFLMGD 474
Query: 1083 KTHSRSNEIYSKLEEMSRRLQEHGHRPRTKEVLFDIEEEEKEDALTYHSERLAIAFSFLE 1262
KTH RS EIY KLEEMSRRL E+GH+PRT EVLFDIEEEEKEDAL+YHSERLAIAF+ +
Sbjct: 475 KTHPRSKEIYLKLEEMSRRLHEYGHKPRTLEVLFDIEEEEKEDALSYHSERLAIAFALIA 534
Query: 1263 GCSNGPIRIIKNLRVCSDCHEWTKLISRIYDREIIVRDRIRFHHFQDGTCSCLDYW 1430
PIRIIKNLRVC DCH +KLIS+IY+REIIVRDR RFHHF++G CSC DYW
Sbjct: 535 SHHCAPIRIIKNLRVCGDCHTSSKLISKIYEREIIVRDRNRFHHFKEGACSCSDYW 590
Score = 63.9 bits (154), Expect = 1e-07
Identities = 49/210 (23%), Positives = 101/210 (48%), Gaps = 13/210 (6%)
Frame = +3
Query: 273 LFSK-MQESFIRPNEVTLVALITACADLGAVNLGTWAHAYVIK-NNLSINRFVGSALITM 446
L+S+ + + ++PN T +L AC + G H +V+K + + FV +AL+
Sbjct: 94 LYSRVLTHTTLKPNGFTFPSLFKACGSQPWLRHGRALHTHVLKFLEPTCDPFVQAALLNY 153
Query: 447 YANCGCLSLACQLFDQLPLRDKICYNAMIRGLAIHGQGC---------KALDLFERMEQE 599
YA CG + LF+Q+ D +N+++ +H G + L LF M++
Sbjct: 154 YAKCGKVGACRYLFNQISKPDLASWNSILSAY-VHNSGAICEDVSLSLEVLTLFIEMQKS 212
Query: 600 GLMPDDVTMLAAMCACSHMGLVDQGFNFFESMINNYGIEPRLEHY--CCLVDLLGRAGRV 773
+ ++VT++A + AC+ +G + QG ++ + +L H+ L+D+ + G +
Sbjct: 213 LIKANEVTLVALISACAELGALSQGAWAHVYVLKH---NLKLNHFVGTALIDMYSKCGCL 269
Query: 774 KEAEETILSMPMSPNAVLWRSLLGAARVHG 863
A + +P + + + +++G +HG
Sbjct: 270 DLACQLFDQLP-HRDTLCYNAMIGGFAIHG 298
>ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containing protein At5g43790-like
[Glycine max]
Length = 591
Score = 665 bits (1717), Expect = 0.0
Identities = 315/476 (66%), Positives = 392/476 (82%)
Frame = +3
Query: 3 WLEHGRTLHAHVLKFLEPPYDPFVQASLLNFYSKSGKVSICRYFFYRISQPDLAAWNSIL 182
WL+HG LHAHVLKFL+PPYDPFVQ SLLNFY+K GK+ + RY F +IS+PDLA WN++L
Sbjct: 119 WLQHGPPLHAHVLKFLQPPYDPFVQNSLLNFYAKYGKLCVSRYLFDQISEPDLATWNTML 178
Query: 183 AAYARNASMIFETNATRFDDSTSLSLEVLHLFSKMQESFIRPNEVTLVALITACADLGAV 362
AAYA++AS + + +T F+D+ +SLE LHLF MQ S I+PNEVTLVALI+AC++LGA+
Sbjct: 179 AAYAQSASHV--SYSTSFEDA-DMSLEALHLFCDMQLSQIKPNEVTLVALISACSNLGAL 235
Query: 363 NLGTWAHAYVIKNNLSINRFVGSALITMYANCGCLSLACQLFDQLPLRDKICYNAMIRGL 542
+ G WAH YV++NNL +NRFVG+AL+ MY+ CGCL+LACQLFD+L RD CYNAMI G
Sbjct: 236 SQGAWAHGYVLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDELSDRDTFCYNAMIGGF 295
Query: 543 AIHGQGCKALDLFERMEQEGLMPDDVTMLAAMCACSHMGLVDQGFNFFESMINNYGIEPR 722
A+HG G +AL+L+ M+ E L+PD T++ M ACSH GLV++G FESM +G+EP+
Sbjct: 296 AVHGHGNQALELYRNMKLEDLVPDGATIVVTMFACSHGGLVEEGLEIFESMKGVHGMEPK 355
Query: 723 LEHYCCLVDLLGRAGRVKEAEETILSMPMSPNAVLWRSLLGAARVHGNVEVGETSLKNLI 902
LEHY CL+DLLGRAGR+KEAEE + MPM PNA+LWRSLLGAA++HGN+E+GE +LK+LI
Sbjct: 356 LEHYGCLIDLLGRAGRLKEAEERLQDMPMKPNAILWRSLLGAAKLHGNLEMGEAALKHLI 415
Query: 903 QLEPESSGNYVLLSNIYASMSRWDDVKRIRKSMKLHGVNKLPGISIAEVNGAMHEFLIGD 1082
+LEPE+SGNYVLLSN+YAS+ RW+DVKR+R MK HGV+KLPG S+ E+NGAMHEFL GD
Sbjct: 416 ELEPETSGNYVLLSNMYASIGRWNDVKRVRMLMKDHGVDKLPGFSLVEINGAMHEFLTGD 475
Query: 1083 KTHSRSNEIYSKLEEMSRRLQEHGHRPRTKEVLFDIEEEEKEDALTYHSERLAIAFSFLE 1262
K H S EIYSK+ E++RRL E+GH+PRT EVLFD+EEE+KED L+YHSERLAIAF+ +
Sbjct: 476 KAHPFSKEIYSKIGEINRRLLEYGHKPRTSEVLFDVEEEDKEDFLSYHSERLAIAFALIA 535
Query: 1263 GCSNGPIRIIKNLRVCSDCHEWTKLISRIYDREIIVRDRIRFHHFQDGTCSCLDYW 1430
S+ PIRIIKNLRVC DCH TKLIS Y R+IIVRDR RFHHF+DG+CSCLDYW
Sbjct: 536 SSSSMPIRIIKNLRVCGDCHAITKLISAAYQRDIIVRDRNRFHHFKDGSCSCLDYW 591
Score = 64.3 bits (155), Expect = 8e-08
Identities = 66/285 (23%), Positives = 121/285 (42%), Gaps = 16/285 (5%)
Frame = +3
Query: 60 YDPFVQASLLNFYSKSGKVSICRYFFYRISQPDLAAWNSILAAYARNASMIFETNATRFD 239
+ + + LLN SK + F I P L +N+++++ T
Sbjct: 35 FQTYYLSHLLNTSSKFAS-TYAFTIFNHIPNPTLFLYNTLISSL------------THHS 81
Query: 240 DSTSLSLEVLHLFSKMQESFIRPNEVTLVALITACADLGAVNLGTWAHAYVIK-NNLSIN 416
D L+ + + + ++PN T +L ACA + G HA+V+K +
Sbjct: 82 DQIHLAFSLYNHI--LTHKTLQPNSFTFPSLFKACASHPWLQHGPPLHAHVLKFLQPPYD 139
Query: 417 RFVGSALITMYANCGCLSLACQLFDQLPLRDKICYNAMIRGLAIHG-------------Q 557
FV ++L+ YA G L ++ LFDQ+ D +N M+ A
Sbjct: 140 PFVQNSLLNFYAKYGKLCVSRYLFDQISEPDLATWNTMLAAYAQSASHVSYSTSFEDADM 199
Query: 558 GCKALDLFERMEQEGLMPDDVTMLAAMCACSHMGLVDQGFNFFESMINNYGIEPRLEHY- 734
+AL LF M+ + P++VT++A + ACS++G + QG ++ N +L +
Sbjct: 200 SLEALHLFCDMQLSQIKPNEVTLVALISACSNLGALSQGAWAHGYVLRN---NLKLNRFV 256
Query: 735 -CCLVDLLGRAGRVKEAEETILSMPMSPNAVLWRSLLGAARVHGN 866
LVD+ + G + A + + + + +++G VHG+
Sbjct: 257 GTALVDMYSKCGCLNLACQ-LFDELSDRDTFCYNAMIGGFAVHGH 300
>ref|XP_003595326.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484374|gb|AES65577.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 740
Score = 620 bits (1600), Expect = e-175
Identities = 297/478 (62%), Positives = 376/478 (78%), Gaps = 2/478 (0%)
Frame = +3
Query: 3 WLEHGRTLHAHVLKFLEPPYDPFVQASLLNFYSKSGKVSICRYFFYRISQPDLAAWNSIL 182
W +G LH HVLKFL+PP+D FVQASLLNFY+K GK+ + RY F RI++PDLA WN IL
Sbjct: 266 WFHYGPLLHTHVLKFLQPPFDNFVQASLLNFYAKYGKMCVSRYIFDRINEPDLATWNVIL 325
Query: 183 AAYARNASMIFETNATRFDDSTSLSLEVLHLFSKMQESFIRPNEVTLVALITACADLGAV 362
AYAR++S + + + FDD+ SLE L+LF MQ IRPNEVT+VALI+AC++LGAV
Sbjct: 326 NAYARSSS--YHSYSNSFDDA-DFSLESLYLFRDMQVIGIRPNEVTIVALISACSNLGAV 382
Query: 363 NLGTWAHAYVIKNNLSINRFVGSALITMYANCGCLSLACQLFDQLPL--RDKICYNAMIR 536
+ G W H +V++N + +NRFVG+A + MY+ CGCL+LACQ+FD++P RD CY AMI
Sbjct: 383 SQGFWVHCFVLRNKIKMNRFVGTAFVDMYSKCGCLNLACQVFDKMPENDRDSFCYTAMIG 442
Query: 537 GLAIHGQGCKALDLFERMEQEGLMPDDVTMLAAMCACSHMGLVDQGFNFFESMINNYGIE 716
G A+HG G +AL+L+ +M+ +GL+PD T + M ACSH+GLV++G F+SM +G+E
Sbjct: 443 GFAVHGYGNQALELYRKMKFKGLVPDSATFVVTMFACSHVGLVEEGLEIFKSMKEVHGVE 502
Query: 717 PRLEHYCCLVDLLGRAGRVKEAEETILSMPMSPNAVLWRSLLGAARVHGNVEVGETSLKN 896
P+LEHY CL+DLLGRAGR+KEAEE + MPM PNAVLWRSLLGAAR+HGN+ VGE +L
Sbjct: 503 PKLEHYGCLIDLLGRAGRLKEAEEWLADMPMKPNAVLWRSLLGAARIHGNLGVGEVALTK 562
Query: 897 LIQLEPESSGNYVLLSNIYASMSRWDDVKRIRKSMKLHGVNKLPGISIAEVNGAMHEFLI 1076
LI+LEPE+SGNYVLLSN+YAS+ R +DVKR+RK MK HGVNKLPG S+ E+ GAMHEFL
Sbjct: 563 LIELEPETSGNYVLLSNMYASVGRVNDVKRVRKLMKHHGVNKLPGFSLVEIKGAMHEFLT 622
Query: 1077 GDKTHSRSNEIYSKLEEMSRRLQEHGHRPRTKEVLFDIEEEEKEDALTYHSERLAIAFSF 1256
GD++H S EIY K+ E++ RL+E+GH+ RT E LFD+EEE+KE L+YHSERLAIAF+
Sbjct: 623 GDRSHPFSKEIYLKIAEINSRLEEYGHKARTSEALFDLEEEDKEGVLSYHSERLAIAFAL 682
Query: 1257 LEGCSNGPIRIIKNLRVCSDCHEWTKLISRIYDREIIVRDRIRFHHFQDGTCSCLDYW 1430
+ S+ IRIIKNLRVC DCH +TKLIS Y REIIVRDR RFHHF+DG+CSCLDYW
Sbjct: 683 IASPSSLAIRIIKNLRVCGDCHAFTKLISVAYHREIIVRDRNRFHHFKDGSCSCLDYW 740
>emb|CBI26320.3| unnamed protein product [Vitis vinifera]
Length = 522
Score = 592 bits (1527), Expect = e-167
Identities = 281/389 (72%), Positives = 333/389 (85%)
Frame = +3
Query: 264 VLHLFSKMQESFIRPNEVTLVALITACADLGAVNLGTWAHAYVIKNNLSINRFVGSALIT 443
VL LF +MQ+S I+ NEVTLVALI+ACA+LGA++ G WAH YV+K+NL +N FVG+ALI
Sbjct: 134 VLTLFIEMQKSLIKANEVTLVALISACAELGALSQGAWAHVYVLKHNLKLNHFVGTALID 193
Query: 444 MYANCGCLSLACQLFDQLPLRDKICYNAMIRGLAIHGQGCKALDLFERMEQEGLMPDDVT 623
MY+ CGCL LACQLFDQLP RD +CYNAMI G AIHG G +ALDLF++M EGL PDDVT
Sbjct: 194 MYSKCGCLDLACQLFDQLPHRDTLCYNAMIGGFAIHGYGHQALDLFKKMTLEGLAPDDVT 253
Query: 624 MLAAMCACSHMGLVDQGFNFFESMINNYGIEPRLEHYCCLVDLLGRAGRVKEAEETILSM 803
++ MC+CSH+GLV++G + FESM YG+EP+LEHY CLVDLLGRAGR++EAEE +L+M
Sbjct: 254 LVVTMCSCSHVGLVEEGCDVFESMKEVYGVEPKLEHYGCLVDLLGRAGRLREAEERVLNM 313
Query: 804 PMSPNAVLWRSLLGAARVHGNVEVGETSLKNLIQLEPESSGNYVLLSNIYASMSRWDDVK 983
PM PNAV+WRSLLGAARVHGN+E+GE LK+LIQLEPE+SGNYVLLSN+YAS++RWDDVK
Sbjct: 314 PMKPNAVIWRSLLGAARVHGNLEIGEVVLKHLIQLEPETSGNYVLLSNMYASINRWDDVK 373
Query: 984 RIRKSMKLHGVNKLPGISIAEVNGAMHEFLIGDKTHSRSNEIYSKLEEMSRRLQEHGHRP 1163
R+RK MK HG+NK+PG S+ EV GAMHEFL+GDKTH RS EIY KLEEMSRRL E+GH+P
Sbjct: 374 RVRKLMKDHGINKVPGSSLVEVGGAMHEFLMGDKTHPRSKEIYLKLEEMSRRLHEYGHKP 433
Query: 1164 RTKEVLFDIEEEEKEDALTYHSERLAIAFSFLEGCSNGPIRIIKNLRVCSDCHEWTKLIS 1343
RT EVLFDIEEEEKEDAL+YHSERLAIAF+ + PIRIIKNLRVC DCH +KLIS
Sbjct: 434 RTLEVLFDIEEEEKEDALSYHSERLAIAFALIASHHCAPIRIIKNLRVCGDCHTSSKLIS 493
Query: 1344 RIYDREIIVRDRIRFHHFQDGTCSCLDYW 1430
+IY+REIIVRDR RFHHF++G CSC DYW
Sbjct: 494 KIYEREIIVRDRNRFHHFKEGACSCSDYW 522
>gb|ABA91346.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica Group]
Length = 624
Score = 507 bits (1305), Expect = e-141
Identities = 243/472 (51%), Positives = 331/472 (70%), Gaps = 3/472 (0%)
Frame = +3
Query: 24 LHAHVLKFL---EPPYDPFVQASLLNFYSKSGKVSICRYFFYRISQPDLAAWNSILAAYA 194
L H +KFL D + A+LL+ +++ G+++ CR F RI+ PDL AWN++L+AYA
Sbjct: 160 LATHSIKFLGAHAASCDRVLGAALLDVFARCGRIASCRKVFDRIANPDLPAWNALLSAYA 219
Query: 195 RNASMIFETNATRFDDSTSLSLEVLHLFSKMQESFIRPNEVTLVALITACADLGAVNLGT 374
R A ++S + +L +F +M I+PNE+TLVA+I AC +LGAV+ G
Sbjct: 220 R-------LRARDVACASSAADAILEMFVRMLSLAIKPNEITLVAVIGACGELGAVSHGV 272
Query: 375 WAHAYVIKNNLSINRFVGSALITMYANCGCLSLACQLFDQLPLRDKICYNAMIRGLAIHG 554
WAH Y +K L++N V +AL+ MYA CG L LA Q+F RD CYNAM+ GLA+HG
Sbjct: 273 WAHTYAVKRRLAVNCIVATALVEMYAGCGRLDLAEQVFAAASDRDTRCYNAMLHGLAVHG 332
Query: 555 QGCKALDLFERMEQEGLMPDDVTMLAAMCACSHMGLVDQGFNFFESMINNYGIEPRLEHY 734
G AL LF+RM EG+ D VT+L+ MCAC+H GLVD+G ++F+ M +GIEP +EHY
Sbjct: 333 HGRAALSLFDRMHGEGVPVDGVTVLSVMCACAHAGLVDEGLDYFDRMEIEFGIEPSIEHY 392
Query: 735 CCLVDLLGRAGRVKEAEETILSMPMSPNAVLWRSLLGAARVHGNVEVGETSLKNLIQLEP 914
C+VD+L RAGR+ +AE+ I MP+ PNA ++RSL+ A +HG +E+G+ + L++LEP
Sbjct: 393 GCMVDMLSRAGRLNDAEKLIHGMPIVPNAAIYRSLIRACGIHGKLELGKKMIAELMRLEP 452
Query: 915 ESSGNYVLLSNIYASMSRWDDVKRIRKSMKLHGVNKLPGISIAEVNGAMHEFLIGDKTHS 1094
+ SGN+VL+SN YA+ +RWDD K+ RK MK G++K PG S ++NG +HEFL+GDKTH
Sbjct: 453 DDSGNHVLISNFYATTNRWDDAKKARKEMKSMGIDKSPGSSFVDINGVLHEFLVGDKTHP 512
Query: 1095 RSNEIYSKLEEMSRRLQEHGHRPRTKEVLFDIEEEEKEDALTYHSERLAIAFSFLEGCSN 1274
S EIY+ +E++ RL E GHR T LFD+EEE+K DAL+YHSERLAIAF+ +
Sbjct: 513 ASKEIYAMVEDIETRLSECGHRSSTSSALFDVEEEDKADALSYHSERLAIAFALIASNPG 572
Query: 1275 GPIRIIKNLRVCSDCHEWTKLISRIYDREIIVRDRIRFHHFQDGTCSCLDYW 1430
PIRIIKNLRVC+DCHE KL+SR+Y REI++RDR RFHHF+DG CSC D+W
Sbjct: 573 APIRIIKNLRVCADCHESAKLVSRVYGREIVMRDRTRFHHFRDGVCSCGDFW 624
Score = 73.9 bits (180), Expect = 1e-10
Identities = 56/220 (25%), Positives = 104/220 (47%), Gaps = 13/220 (5%)
Frame = +3
Query: 246 TSLSLEVLHLFSKMQESFIRPNEVTLVALITACADLGAVNLGTWAHAYVIKNNLSINRFV 425
++LSL L S +RPN T L A A+ L T + ++ + S +R +
Sbjct: 120 SALSLYALLFLSSSSPPLLRPNAFTYPPLFRAAPPALALALATHSIKFLGAHAASCDRVL 179
Query: 426 GSALITMYANCGCLSLACQLFDQLPLRDKICYNAMI--------RGLAIHGQGCKA-LDL 578
G+AL+ ++A CG ++ ++FD++ D +NA++ R +A A L++
Sbjct: 180 GAALLDVFARCGRIASCRKVFDRIANPDLPAWNALLSAYARLRARDVACASSAADAILEM 239
Query: 579 FERMEQEGLMPDDVTMLAAMCACSHMGLVDQGFNFFESMINNYGIEPRLEHYC----CLV 746
F RM + P+++T++A + AC +G V G + Y ++ RL C LV
Sbjct: 240 FVRMLSLAIKPNEITLVAVIGACGELGAVSHGV-----WAHTYAVKRRLAVNCIVATALV 294
Query: 747 DLLGRAGRVKEAEETILSMPMSPNAVLWRSLLGAARVHGN 866
++ GR+ AE+ + + + + ++L VHG+
Sbjct: 295 EMYAGCGRLDLAEQ-VFAAASDRDTRCYNAMLHGLAVHGH 333