BLASTX nr result
ID: Lithospermum22_contig00019128
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00019128
(789 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo... 101 1e-28
gb|ABA98491.1| retrotransposon protein, putative, unclassified [... 100 2e-28
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ... 100 2e-28
gb|AAP53315.2| retrotransposon protein, putative, unclassified [... 100 2e-28
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib... 119 2e-27
>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
Length = 1594
Score = 101 bits (251), Expect(3) = 1e-28
Identities = 60/168 (35%), Positives = 87/168 (51%)
Frame = -1
Query: 639 KDDGGLSFRDTQRFNQALLCKQAWKLITEPSSQLSQVYKARYFSKTDFWTATLGSKSSYT 460
K+ GGL FRD FN A+L KQ W+LI +P S S+V +A+YF D + S SYT
Sbjct: 1077 KNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLGDCFRPKQTSNVSYT 1136
Query: 459 WRNIFSVRNIICTETKWKLASGIDIRVWDHKLVDHTHSNKIIIPIQAKLRDIKVSDLIDV 280
WR+I ++ W++ G I +W + S K + P A L KV +LID
Sbjct: 1137 WRSIQKGLRVLQNGMIWRMGDGSKINIWADPWIPRGWSRKPMTPRGANL-VTKVEELIDP 1195
Query: 279 EIGIWKVDYVRAIFYDIDSESIL*IPLHNIEGQDMPLWIDSKQGKFTL 136
G W D + F++ D +I IP+H +E +D+ W +G FT+
Sbjct: 1196 YTGTWDEDLLSQTFWEEDVAAIKSIPVH-VEMEDVLAWHFDARGCFTV 1242
Score = 43.9 bits (102), Expect(3) = 1e-28
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = -2
Query: 788 SIPTFTM*CFKLPVQVYNEINSILANLWWG*NSTSKREIHWLP*KHFVSQRMMVGLAF 615
+IPTF M CF+L + ++I+ ++A WW N ++HWL + M GL F
Sbjct: 1028 AIPTFAMGCFELTKDLCDQISKMIAKYWWS-NQEKDNKMHWLSWNKLTLPKNMGGLGF 1084
Score = 27.7 bits (60), Expect(3) = 1e-28
Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Frame = -3
Query: 139 IKSTYHLAISMDSEAHMGASTSVES-----NLIYKQIWNIKVPRKVIHFMY 2
+KS Y + M+ A V + + +K++W + VP K+ HF++
Sbjct: 1242 VKSAYKVQREMERRASRNGCPGVSNWESGDDDFWKKLWKLGVPGKIKHFLW 1292
>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1621
Score = 100 bits (250), Expect(3) = 2e-28
Identities = 60/168 (35%), Positives = 87/168 (51%)
Frame = -1
Query: 639 KDDGGLSFRDTQRFNQALLCKQAWKLITEPSSQLSQVYKARYFSKTDFWTATLGSKSSYT 460
K+ GGL FRD FN A+L KQ W+LI +P S S+V +A+YF D + S SYT
Sbjct: 1104 KNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLGDCFRPKQTSNVSYT 1163
Query: 459 WRNIFSVRNIICTETKWKLASGIDIRVWDHKLVDHTHSNKIIIPIQAKLRDIKVSDLIDV 280
WR+I ++ W++ G I +W + S K + P A L KV +LID
Sbjct: 1164 WRSIQKGLRVLQNGMIWRVGDGSKINIWADPWIPRGWSRKPMTPRGANL-VTKVEELIDP 1222
Query: 279 EIGIWKVDYVRAIFYDIDSESIL*IPLHNIEGQDMPLWIDSKQGKFTL 136
G W D + F++ D +I IP+H +E +D+ W +G FT+
Sbjct: 1223 YTGTWDEDLLSQTFWEEDVAAIKSIPVH-VEMEDVLAWHFDARGCFTV 1269
Score = 43.9 bits (102), Expect(3) = 2e-28
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = -2
Query: 788 SIPTFTM*CFKLPVQVYNEINSILANLWWG*NSTSKREIHWLP*KHFVSQRMMVGLAF 615
+IPTF M CF+L + ++I+ ++A WW N ++HWL + M GL F
Sbjct: 1055 AIPTFAMGCFELTKDLCDQISKMIAKYWWS-NQEKDNKMHWLSWNKLTLPKNMGGLGF 1111
Score = 27.7 bits (60), Expect(3) = 2e-28
Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Frame = -3
Query: 139 IKSTYHLAISMDSEAHMGASTSVES-----NLIYKQIWNIKVPRKVIHFMY 2
+KS Y + M+ A V + + +K++W + VP K+ HF++
Sbjct: 1269 VKSAYKVQREMERRASRNGCPGVSNWESGDDDFWKKLWKLGVPGKIKHFLW 1319
>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1509
Score = 100 bits (250), Expect(3) = 2e-28
Identities = 60/168 (35%), Positives = 87/168 (51%)
Frame = -1
Query: 639 KDDGGLSFRDTQRFNQALLCKQAWKLITEPSSQLSQVYKARYFSKTDFWTATLGSKSSYT 460
K+ GGL FRD FN A+L KQ W+LI +P S S+V +A+YF D + S SYT
Sbjct: 1049 KNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLGDCFRPKQTSNVSYT 1108
Query: 459 WRNIFSVRNIICTETKWKLASGIDIRVWDHKLVDHTHSNKIIIPIQAKLRDIKVSDLIDV 280
WR+I ++ W++ G I +W + S K + P A L KV +LID
Sbjct: 1109 WRSIQKGLRVLQNGMIWRVGDGSKINIWADPWIPRGWSRKPMTPRGANL-VTKVEELIDP 1167
Query: 279 EIGIWKVDYVRAIFYDIDSESIL*IPLHNIEGQDMPLWIDSKQGKFTL 136
G W D + F++ D +I IP+H +E +D+ W +G FT+
Sbjct: 1168 YTGTWDEDLLSQTFWEEDVAAIKSIPVH-VEMEDVLAWHFDARGCFTV 1214
Score = 43.5 bits (101), Expect(3) = 2e-28
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = -2
Query: 785 IPTFTM*CFKLPVQVYNEINSILANLWWG*NSTSKREIHWLP*KHFVSQRMMVGLAF 615
IPTF M CF+L + ++I+ ++A WW N ++HWL + M GL F
Sbjct: 1001 IPTFAMGCFELTKDLCDQISKMIAKYWWS-NQEKDNKMHWLSWNKLTLPKNMGGLGF 1056
Score = 27.7 bits (60), Expect(3) = 2e-28
Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Frame = -3
Query: 139 IKSTYHLAISMDSEAHMGASTSVES-----NLIYKQIWNIKVPRKVIHFMY 2
+KS Y + M+ A V + + +K++W + VP K+ HF++
Sbjct: 1214 VKSAYKVQREMERRASRNGCPGVSNWESGDDDFWKKLWKLGVPGKIKHFLW 1264
>gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1505
Score = 100 bits (250), Expect(3) = 2e-28
Identities = 60/168 (35%), Positives = 87/168 (51%)
Frame = -1
Query: 639 KDDGGLSFRDTQRFNQALLCKQAWKLITEPSSQLSQVYKARYFSKTDFWTATLGSKSSYT 460
K+ GGL FRD FN A+L KQ W+LI +P S S+V +A+YF D + S SYT
Sbjct: 1045 KNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLGDCFRPKQTSNVSYT 1104
Query: 459 WRNIFSVRNIICTETKWKLASGIDIRVWDHKLVDHTHSNKIIIPIQAKLRDIKVSDLIDV 280
WR+I ++ W++ G I +W + S K + P A L KV +LID
Sbjct: 1105 WRSIQKGLRVLQNGMIWRVGDGSKINIWADPWIPRGWSRKPMTPRGANL-VTKVEELIDP 1163
Query: 279 EIGIWKVDYVRAIFYDIDSESIL*IPLHNIEGQDMPLWIDSKQGKFTL 136
G W D + F++ D +I IP+H +E +D+ W +G FT+
Sbjct: 1164 YTGTWDEDLLSQTFWEEDVAAIKSIPVH-VEMEDVLAWHFDARGCFTV 1210
Score = 43.5 bits (101), Expect(3) = 2e-28
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = -2
Query: 785 IPTFTM*CFKLPVQVYNEINSILANLWWG*NSTSKREIHWLP*KHFVSQRMMVGLAF 615
IPTF M CF+L + ++I+ ++A WW N ++HWL + M GL F
Sbjct: 997 IPTFAMGCFELTKDLCDQISKMIAKYWWS-NQEKDNKMHWLSWNKLTLPKNMGGLGF 1052
Score = 27.7 bits (60), Expect(3) = 2e-28
Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Frame = -3
Query: 139 IKSTYHLAISMDSEAHMGASTSVES-----NLIYKQIWNIKVPRKVIHFMY 2
+KS Y + M+ A V + + +K++W + VP K+ HF++
Sbjct: 1210 VKSAYKVQREMERRASRNGCPGVSNWESGDDDFWKKLWKLGVPGKIKHFLW 1260
>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
At1g65750-like [Vitis vinifera]
Length = 820
Score = 119 bits (298), Expect(2) = 2e-27
Identities = 62/169 (36%), Positives = 93/169 (55%)
Frame = -1
Query: 645 KSKDDGGLSFRDTQRFNQALLCKQAWKLITEPSSQLSQVYKARYFSKTDFWTATLGSKSS 466
K K DGGL FR FN ALL KQ W+ + P S ++++++ARYF + F A LGS S
Sbjct: 314 KQKKDGGLGFRKLXDFNLALLAKQGWRFLRNPDSLVTRIFQARYFRNSSFLNAELGSNPS 373
Query: 465 YTWRNIFSVRNIICTETKWKLASGIDIRVWDHKLVDHTHSNKIIIPIQAKLRDIKVSDLI 286
Y WR+I + + ++ W +ASG ++VW + + + II P A IKV +LI
Sbjct: 374 YMWRSILAAQGLLKRGCYWSIASGTKVQVWGDSWLPDSSNRLIITPPVAGFDGIKVDELI 433
Query: 285 DVEIGIWKVDYVRAIFYDIDSESIL*IPLHNIEGQDMPLWIDSKQGKFT 139
G+W+ D++R F D++ IL IPL +D W +G++T
Sbjct: 434 TE--GLWREDFIRDKFMARDADLILSIPLPMSSREDQISWSFDARGEYT 480
Score = 29.6 bits (65), Expect(2) = 2e-27
Identities = 8/27 (29%), Positives = 19/27 (70%)
Frame = -3
Query: 82 STSVESNLIYKQIWNIKVPRKVIHFMY 2
++ V+SN ++ Q+W + P K+++F +
Sbjct: 499 ASDVDSNFVWAQLWKVTAPPKILNFAW 525