BLASTX nr result

ID: Lithospermum22_contig00019102 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00019102
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519367.1| replication factor C / DNA polymerase III ga...    80   1e-13
ref|XP_003528725.1| PREDICTED: uncharacterized protein LOC100814...    77   1e-12
ref|XP_003550458.1| PREDICTED: uncharacterized protein LOC100791...    74   2e-11
gb|AFN58239.1| trichome branching-like protein [Gossypium arboreum]    73   3e-11
ref|XP_002268959.2| PREDICTED: uncharacterized protein LOC100242...    72   5e-11

>ref|XP_002519367.1| replication factor C / DNA polymerase III gamma-tau subunit, putative
            [Ricinus communis] gi|223541434|gb|EEF42984.1|
            replication factor C / DNA polymerase III gamma-tau
            subunit, putative [Ricinus communis]
          Length = 1270

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 47/106 (44%), Positives = 59/106 (55%), Gaps = 2/106 (1%)
 Frame = +2

Query: 2    EDDLNNELQNLKIIDGKVFHDDQTSKK-DHLPLSPSLLHNTNFAGHFNKENTGYEXXXXX 178
            E +LN+EL+ LK+ + +V H DQ  K+ DH P+SPSLLH +NF G+ NKE+ GYE     
Sbjct: 1162 EHELNDELKVLKMEERRVLHKDQIGKRADHYPISPSLLHGSNFVGNLNKESLGYESSSAG 1221

Query: 179  XXXXXXXXWNNYKPHKRIKTNQAKQGTRVRSH-KGGIFVLFKDCTK 313
                    WN  K HK         GT VR   KGG F LF +C K
Sbjct: 1222 GGCSGLFCWNANKSHK-------VNGTPVRYRGKGGRFSLFGECGK 1260


>ref|XP_003528725.1| PREDICTED: uncharacterized protein LOC100814391 [Glycine max]
          Length = 1237

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 44/106 (41%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
 Frame = +2

Query: 2    EDDLNNELQNLKIIDGKVFHDDQTSKK-DHLPLSPSLLHNTNFAGHFNKENTGYEXXXXX 178
            ED+LNNE++ L + +G+V   DQ  +K D  P+SPSLLH+ + A    K+N GYE     
Sbjct: 1129 EDELNNEVKVLSLKNGRVPQKDQIGRKADRYPMSPSLLHDNSLATISGKDNLGYE-SGSG 1187

Query: 179  XXXXXXXXWNNYKPHKRIKTNQAKQGTRVRSHKGGIFVLFKDCTKP 316
                    WN  KP + +K    K GT VR+ +   F LF DCTKP
Sbjct: 1188 AGGCGFLCWNKSKPRRVVK---VKGGTPVRARRAATFTLFGDCTKP 1230


>ref|XP_003550458.1| PREDICTED: uncharacterized protein LOC100791561 [Glycine max]
          Length = 1236

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 43/106 (40%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
 Frame = +2

Query: 2    EDDLNNELQNLKIIDGKVFHDDQTSKK-DHLPLSPSLLHNTNFAGHFNKENTGYEXXXXX 178
            EDD N+E++ L + +G++   DQ  +K D  P+SPSLLH+ + A    K+N GYE     
Sbjct: 1128 EDDPNDEVKVLSLKNGRIPQKDQIGRKTDRFPMSPSLLHDNSLATISGKDNLGYE-SGSG 1186

Query: 179  XXXXXXXXWNNYKPHKRIKTNQAKQGTRVRSHKGGIFVLFKDCTKP 316
                    WN  KP + IK    K GT VR+ +   F LF DCTKP
Sbjct: 1187 AGGCGFLCWNKSKPRRVIK---VKGGTPVRAGRAATFTLFGDCTKP 1229


>gb|AFN58239.1| trichome branching-like protein [Gossypium arboreum]
          Length = 1223

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 45/105 (42%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
 Frame = +2

Query: 2    EDDLNNELQNLKIIDGKVFHDDQTSKK-DHLPLSPSLLHNTNFAGHFNKENTGYEXXXXX 178
            +++LN EL+ LK  DG+    DQ  ++ DH P+SPSLLHN+      +KEN GYE     
Sbjct: 1115 DEELNRELKILKTNDGQEIQKDQLGRRADHYPMSPSLLHNST----LSKEN-GYESGSGT 1169

Query: 179  XXXXXXXXWNNYKPHKRIKTNQAKQGTRVRSHKGGIFVLFKDCTK 313
                    WNN KP +R K  Q K GT VRS +   F LF +C K
Sbjct: 1170 GGCSGLFCWNNSKPRRRAKVGQVK-GTPVRSCRTRRFSLFGECGK 1213


>ref|XP_002268959.2| PREDICTED: uncharacterized protein LOC100242129 [Vitis vinifera]
          Length = 1274

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 41/105 (39%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
 Frame = +2

Query: 2    EDDLNNELQNLKIIDGKVFHDDQTSKK-DHLPLSPSLLHNTNFAGHFNKENTGYEXXXXX 178
            ED+LN+E++ LKI D +    D   K+ DH P+SPS LH+++F  +FNKE+ GYE     
Sbjct: 1161 EDELNHEIKVLKINDRRALQKDPVGKRVDHYPISPSSLHDSSFVANFNKESMGYESGTGS 1220

Query: 179  XXXXXXXXWNNYKPHKRIKTNQAKQGTRVRSHKGGIFVLFKDCTK 313
                    WNN KP KR K  Q       +  +G  F  F +C K
Sbjct: 1221 VGCNSFFCWNNDKPPKRGKIKQRPPLPSPKVGRGR-FPCFGECGK 1264


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