BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00019093
         (954 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group] g...   253   6e-65
gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sa...   252   8e-65
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group...   252   1e-64
gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subc...   251   1e-64
gb|EEC76475.1| hypothetical protein OsI_14210 [Oryza sativa Indi...   250   3e-64

>ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group]
            gi|255678617|dbj|BAH94406.1| Os08g0544300 [Oryza sativa
            Japonica Group]
          Length = 821

 Score =  253 bits (645), Expect = 6e-65
 Identities = 134/265 (50%), Positives = 169/265 (63%), Gaps = 7/265 (2%)
 Frame = -2

Query: 944  LLLS*RQYMIDLLVKANMLHCKPA---LGXXXXXXXXXXXXXXPPDPTLYRQLVGCLQYF 774
            L+LS  +Y  DLL +  M  CKP    L               P D T YR +VG LQY 
Sbjct: 548  LMLSQEKYASDLLRRVGMYECKPVSTPLSTSEKLSVNEGTLLGPQDSTQYRSVVGALQYL 607

Query: 773  TLTRPDLSYVVNRVFQHMHDHTSEHFSMVKRILCYVKATIDLGLLITPSSQLTIQAFSDA 594
            TLTRPD+S+ +N+V Q +H  T+ H++ VKRIL YVK T+D GL    +  L +  FSDA
Sbjct: 608  TLTRPDISFSINKVCQFLHAPTTTHWAAVKRILRYVKYTVDTGLKFCRNPSLLVSGFSDA 667

Query: 593  DWAMSSSDFRSTGGYVVYLGPNLVSWQSKKQHIVVHSSTESEYKALANCSTEISWLLSLR 414
            DWA S  D RSTGG+ V+LGPNLVSW ++KQ  V  SSTE+EYKALAN + EI W+ +L 
Sbjct: 668  DWAGSPDDRRSTGGFAVFLGPNLVSWSARKQATVSRSSTEAEYKALANATAEIMWVQTLL 727

Query: 413  SELQLSPPRPHVLWCDNLGATYL----VFHARTKHIEIEFHLVRGKVARKELQIQLISTK 246
             EL +  PR   LWCDNLGA YL    +FHARTKHIE++FH VR +VARK L+I  ISTK
Sbjct: 728  QELGVESPRAAKLWCDNLGAKYLSANPIFHARTKHIEVDFHFVRERVARKLLEIAYISTK 787

Query: 245  NQIADNLTKPLSGTRFSFFRDKLRL 171
            +Q+AD  TK +   +   F++ L L
Sbjct: 788  DQVADGFTKAIPVRQMEMFKNNLNL 812


>gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|31433472|gb|AAP54977.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1031

 Score =  252 bits (644), Expect = 8e-65
 Identities = 132/265 (49%), Positives = 175/265 (66%), Gaps = 7/265 (2%)
 Frame = -2

Query: 944  LLLS*RQYMIDLLVKANMLHCKPA---LGXXXXXXXXXXXXXXPPDPTLYRQLVGCLQYF 774
            ++L+  +Y +D+L + NM  CK     L               P D T YR LVG LQY 
Sbjct: 763  IVLTQEKYAMDVLKRVNMSDCKAVNTPLSISEKLSAHEGNPLGPEDSTRYRSLVGALQYL 822

Query: 773  TLTRPDLSYVVNRVFQHMHDHTSEHFSMVKRILCYVKATIDLGLLITPSSQLTIQAFSDA 594
            TLTRPDLS+ VN+V Q++H  T++H+   KRIL Y+K T+ LGL I+ S+ L + AFSDA
Sbjct: 823  TLTRPDLSFSVNKVCQYLHAATTKHWVAAKRILRYLKHTVKLGLKISKSNSLLVSAFSDA 882

Query: 593  DWAMSSSDFRSTGGYVVYLGPNLVSWQSKKQHIVVHSSTESEYKALANCSTEISWLLSLR 414
            DWA    D RSTGG+ V++GPNLVSW ++KQ  V  SSTE+EYKALAN + EI W+ +L 
Sbjct: 883  DWAGCLDDRRSTGGFAVFIGPNLVSWSARKQATVSRSSTEAEYKALANATAEIMWIQTLL 942

Query: 413  SELQLSPPRPHVLWCDNLGATYL----VFHARTKHIEIEFHLVRGKVARKELQIQLISTK 246
             EL +  P+   +WCDN+GA Y+    VFHARTKHIE+++H VR +VARK LQ++ ISTK
Sbjct: 943  HELGIQVPKIAKVWCDNIGAKYMTANPVFHARTKHIEVDYHFVRERVARKLLQVEYISTK 1002

Query: 245  NQIADNLTKPLSGTRFSFFRDKLRL 171
            +Q+AD  TK LS  +   FR+ L L
Sbjct: 1003 DQVADGFTKTLSVRQLEMFRNNLNL 1027


>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1431

 Score =  252 bits (643), Expect = 1e-64
 Identities = 131/268 (48%), Positives = 176/268 (65%), Gaps = 7/268 (2%)
 Frame = -2

Query: 953  DGSLLLS*RQYMIDLLVKANMLHCKPA---LGXXXXXXXXXXXXXXPPDPTLYRQLVGCL 783
            +  ++L+  +Y +D+L + NM  CK     L               P D T YR LVG L
Sbjct: 1160 NNGIVLTQEKYAMDVLKRVNMSDCKAVNTPLSISEKLSAHEGNPFGPEDSTRYRSLVGAL 1219

Query: 782  QYFTLTRPDLSYVVNRVFQHMHDHTSEHFSMVKRILCYVKATIDLGLLITPSSQLTIQAF 603
            QY TLTRPDLS+ VN+V Q++H  T++H++  KRIL Y+K T+ LGL I+ S+ L + AF
Sbjct: 1220 QYLTLTRPDLSFSVNKVCQYLHAPTTKHWAAAKRILRYLKHTVKLGLKISKSNSLLVSAF 1279

Query: 602  SDADWAMSSSDFRSTGGYVVYLGPNLVSWQSKKQHIVVHSSTESEYKALANCSTEISWLL 423
            SDADWA    D  STGG+ V++GPNLVSW ++KQ  V  SSTE+EYKALAN + EI W+ 
Sbjct: 1280 SDADWAGCLDDRHSTGGFAVFIGPNLVSWSARKQATVSRSSTEAEYKALANVTAEIMWIQ 1339

Query: 422  SLRSELQLSPPRPHVLWCDNLGATYL----VFHARTKHIEIEFHLVRGKVARKELQIQLI 255
            +L  EL +  P+   +WCDN+GA Y+    VFHARTKHIE+++H VR +VARK LQ++ I
Sbjct: 1340 TLLHELGIQAPKIAKVWCDNIGAKYMTANPVFHARTKHIEVDYHFVRERVARKFLQVEYI 1399

Query: 254  STKNQIADNLTKPLSGTRFSFFRDKLRL 171
            STK+Q+AD  TK LS  +   FR+ L L
Sbjct: 1400 STKDQVADGFTKTLSVRQLEMFRNNLNL 1427


>gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 932

 Score =  251 bits (642), Expect = 1e-64
 Identities = 134/265 (50%), Positives = 171/265 (64%), Gaps = 7/265 (2%)
 Frame = -2

Query: 944  LLLS*RQYMIDLLVKANMLHCKPA---LGXXXXXXXXXXXXXXPPDPTLYRQLVGCLQYF 774
            L+LS   Y  D+L +A M  CKPA   L                 D + YR +VG LQY 
Sbjct: 667  LVLSQAWYASDILKRAGMSICKPASTPLSTTEKLSIEDGDFLGQNDASHYRSIVGALQYL 726

Query: 773  TLTRPDLSYVVNRVFQHMHDHTSEHFSMVKRILCYVKATIDLGLLITPSSQLTIQAFSDA 594
            TLTR DLS++VN+V Q +H  T+ H+S VKRIL Y+K T++ GL    S  + I AFSDA
Sbjct: 727  TLTRSDLSFLVNKVCQFLHSPTTVHWSAVKRILRYIKGTVEFGLRFGKSDSMLISAFSDA 786

Query: 593  DWAMSSSDFRSTGGYVVYLGPNLVSWQSKKQHIVVHSSTESEYKALANCSTEISWLLSLR 414
            DWA  S D RSTGG+ V+LGPNL+SW ++KQ  V  SSTE+EYKALAN +TE++W+  + 
Sbjct: 787  DWAGCSDDRRSTGGFAVFLGPNLISWSARKQATVSRSSTEAEYKALANATTEVTWVRKIL 846

Query: 413  SELQLSPPRPHVLWCDNLGATYL----VFHARTKHIEIEFHLVRGKVARKELQIQLISTK 246
             EL+++ P    LWCDNLGATYL    VFHARTKHIEI++H VR +VA+K L IQ IST 
Sbjct: 847  DELRIARPSVAQLWCDNLGATYLSANPVFHARTKHIEIDYHFVREQVAKKLLDIQFISTT 906

Query: 245  NQIADNLTKPLSGTRFSFFRDKLRL 171
            +Q+AD  TK L     + +R  L L
Sbjct: 907  DQLADGFTKSLPAPSLAQYRHNLNL 931


>gb|EEC76475.1| hypothetical protein OsI_14210 [Oryza sativa Indica Group]
          Length = 391

 Score =  250 bits (639), Expect = 3e-64
 Identities = 133/265 (50%), Positives = 168/265 (63%), Gaps = 7/265 (2%)
 Frame = -2

Query: 944 LLLS*RQYMIDLLVKANMLHCKPA---LGXXXXXXXXXXXXXXPPDPTLYRQLVGCLQYF 774
           L+LS  +Y  DLL +  M  CKP    L               P D T YR +VG LQY 
Sbjct: 118 LMLSQEKYASDLLRRVGMYECKPVSTPLSTSEKLSVNEGTLLGPQDSTQYRSVVGALQYL 177

Query: 773 TLTRPDLSYVVNRVFQHMHDHTSEHFSMVKRILCYVKATIDLGLLITPSSQLTIQAFSDA 594
           TLTRPD+S+ +N+V Q +H  T+ H++ VKRIL YVK T+D GL    +  L +  FSDA
Sbjct: 178 TLTRPDISFSINKVCQFLHAPTTTHWAAVKRILRYVKYTVDTGLKFCRNPSLLVSGFSDA 237

Query: 593 DWAMSSSDFRSTGGYVVYLGPNLVSWQSKKQHIVVHSSTESEYKALANCSTEISWLLSLR 414
           DWA S  D RSTGG+ V+LGPNLVSW ++KQ  V  SS E+EYKALAN + EI W+ +L 
Sbjct: 238 DWAGSPDDRRSTGGFAVFLGPNLVSWSARKQATVSRSSIEAEYKALANATAEIMWVQTLL 297

Query: 413 SELQLSPPRPHVLWCDNLGATYL----VFHARTKHIEIEFHLVRGKVARKELQIQLISTK 246
            EL +  PR   LWCDNLGA YL    +FHARTKHIE++FH VR +VARK L+I  ISTK
Sbjct: 298 QELGVESPRAAKLWCDNLGAKYLSANPIFHARTKHIEVDFHFVRERVARKLLEIAYISTK 357

Query: 245 NQIADNLTKPLSGTRFSFFRDKLRL 171
           +Q+AD  TK +   +   F++ L L
Sbjct: 358 DQVADGFTKAIPVRQMEMFKNNLNL 382