BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00019080
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512534.1| pentatricopeptide repeat-containing protein,...   184   8e-45
ref|XP_002330073.1| predicted protein [Populus trichocarpa] gi|2...   183   1e-44
ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containi...   179   2e-43
ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containi...   179   3e-43
ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containi...   179   3e-43

>ref|XP_002512534.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548495|gb|EEF49986.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 444

 Score =  184 bits (466), Expect = 8e-45
 Identities = 84/128 (65%), Positives = 106/128 (82%)
 Frame = +3

Query: 9   SYVNLQNALIHMYSTFGDVKAAEILFNSSSHLDLISWNSMISGYLRCSLVEKAREIFDSM 188
           SYVNLQNALIHMYS+  ++ +A+ LFN    LD ISWNSMISGYL+C  +EKA+ +FD M
Sbjct: 192 SYVNLQNALIHMYSSCREIDSAQKLFNVGYSLDQISWNSMISGYLKCGEIEKAKALFDIM 251

Query: 189 PEKDIISWTAMISGYSQHGRFENTVGFFQKMLVEGVKPDEITLVSVISACTHLSSLDQGK 368
            +KD++SW+AMISGY+QH RF  T+  FQ+M ++GVKPDE TLVSV+SACTHL++LDQGK
Sbjct: 252 NDKDLVSWSAMISGYAQHDRFAETLALFQEMQLDGVKPDETTLVSVVSACTHLAALDQGK 311

Query: 369 WIHAYIRK 392
           WIH Y+RK
Sbjct: 312 WIHLYLRK 319



 Score =  104 bits (260), Expect = 6e-21
 Identities = 52/122 (42%), Positives = 81/122 (66%)
 Frame = +3

Query: 15  VNLQNALIHMYSTFGDVKAAEILFNSSSHLDLISWNSMISGYLRCSLVEKAREIFDSMPE 194
           V +QN LI++YS   ++  A  +F+ S  LDL+SWNS+++G      V +A  +F  M +
Sbjct: 65  VYVQNTLINLYSVCQNLGDARKVFDESPVLDLVSWNSILAGK---GDVTEAYRLFSEMCK 121

Query: 195 KDIISWTAMISGYSQHGRFENTVGFFQKMLVEGVKPDEITLVSVISACTHLSSLDQGKWI 374
           KD++SW+A+ISGY Q+GR+E  +  F KM   G+  DE+ +VSV+SAC HL ++  GK +
Sbjct: 122 KDLVSWSALISGYEQNGRYEEALVTFGKMNAYGIMVDEVVVVSVLSACAHLFAVKTGKLV 181

Query: 375 HA 380
           H+
Sbjct: 182 HS 183



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/89 (33%), Positives = 54/89 (60%)
 Frame = +3

Query: 102 LDLISWNSMISGYLRCSLVEKAREIFDSMPEKDIISWTAMISGYSQHGRFENTVGFFQKM 281
           +++I   ++I  Y++   VE A E+F  M EK + +W A+I G + +G    ++  F +M
Sbjct: 324 INVILGTTLIDMYMKFGCVEDALEVFHGMKEKGVSTWNAVILGLALNGLVHMSLDTFSEM 383

Query: 282 LVEGVKPDEITLVSVISACTHLSSLDQGK 368
              GV P+EIT V+V+ AC H+  +++G+
Sbjct: 384 KDCGVVPNEITFVAVLVACRHMGLVEEGR 412


>ref|XP_002330073.1| predicted protein [Populus trichocarpa] gi|222871498|gb|EEF08629.1|
           predicted protein [Populus trichocarpa]
          Length = 793

 Score =  183 bits (464), Expect = 1e-44
 Identities = 87/128 (67%), Positives = 105/128 (82%)
 Frame = +3

Query: 9   SYVNLQNALIHMYSTFGDVKAAEILFNSSSHLDLISWNSMISGYLRCSLVEKAREIFDSM 188
           +YVNLQNALIHMYS+  +V  A+ LF+ S  LD ISWNSMISGY++C  +EKAR +FDSM
Sbjct: 322 TYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSM 381

Query: 189 PEKDIISWTAMISGYSQHGRFENTVGFFQKMLVEGVKPDEITLVSVISACTHLSSLDQGK 368
           P+KD +SW+AMISGY+Q  RF  T+  FQ+M +EG KPDE  LVSVISACTHL++LDQGK
Sbjct: 382 PDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGK 441

Query: 369 WIHAYIRK 392
           WIHAYIRK
Sbjct: 442 WIHAYIRK 449



 Score =  102 bits (255), Expect = 2e-20
 Identities = 54/159 (33%), Positives = 89/159 (55%), Gaps = 31/159 (19%)
 Frame = +3

Query: 9   SYVNLQNALIHMYSTFGDVKAAEILFNSSSHLDLISWNSMISGYLRCSLVEKAREIFDSM 188
           S V +QN LI+MY+  G++  A  +F+ SS LD++SWNSM++GY+    VE+A++++D M
Sbjct: 159 SDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYVLVGNVEEAKDVYDRM 218

Query: 189 PE-------------------------------KDIISWTAMISGYSQHGRFENTVGFFQ 275
           PE                               KD++SW+A+IS Y Q+  +E  +  F+
Sbjct: 219 PERNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFK 278

Query: 276 KMLVEGVKPDEITLVSVISACTHLSSLDQGKWIHAYIRK 392
           +M   G+  DE+ ++SV+SAC+ L  +  GK +H  + K
Sbjct: 279 EMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVK 317



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 30/88 (34%), Positives = 55/88 (62%)
 Frame = +3

Query: 102 LDLISWNSMISGYLRCSLVEKAREIFDSMPEKDIISWTAMISGYSQHGRFENTVGFFQKM 281
           +++I   ++I+ Y++   VE A E+F  + EK + +W A+I G + +G  + ++  F +M
Sbjct: 454 INIILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEM 513

Query: 282 LVEGVKPDEITLVSVISACTHLSSLDQG 365
              GV P+EIT V+V+ AC H+  +D+G
Sbjct: 514 KEHGVTPNEITFVAVLGACRHMGLVDEG 541


>ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 808

 Score =  179 bits (454), Expect = 2e-43
 Identities = 84/128 (65%), Positives = 103/128 (80%)
 Frame = +3

Query: 9   SYVNLQNALIHMYSTFGDVKAAEILFNSSSHLDLISWNSMISGYLRCSLVEKAREIFDSM 188
           SYVNLQNALIHMYS  G++  A+ LFN S +LD ISWNSMISG ++C  VEKAR +FD M
Sbjct: 337 SYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVM 396

Query: 189 PEKDIISWTAMISGYSQHGRFENTVGFFQKMLVEGVKPDEITLVSVISACTHLSSLDQGK 368
           PEKDI+SW+A+ISGY+QH  F  T+  F +M +  ++PDE  LVSVISACTHL++LDQGK
Sbjct: 397 PEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGK 456

Query: 369 WIHAYIRK 392
           W+HAYIRK
Sbjct: 457 WVHAYIRK 464



 Score =  111 bits (278), Expect = 5e-23
 Identities = 60/157 (38%), Positives = 90/157 (57%), Gaps = 31/157 (19%)
 Frame = +3

Query: 9   SYVNLQNALIHMYSTFGDVKAAEILFNSSSHLDLISWNSMISGYLRCSLVEKAREIFDSM 188
           S V +QN LI+MY+  G+++ A  LF+ S  LD +SWNS+++GY++   VE+A+ IFD M
Sbjct: 174 SDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDVEEAKLIFDQM 233

Query: 189 P-------------------------------EKDIISWTAMISGYSQHGRFENTVGFFQ 275
           P                               EKD++SW+A+ISGY Q+G +E  +  F 
Sbjct: 234 PQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFI 293

Query: 276 KMLVEGVKPDEITLVSVISACTHLSSLDQGKWIHAYI 386
           +M   G++ DE+ +VSV+SAC HLS +  GK IH  +
Sbjct: 294 EMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLV 330



 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 32/89 (35%), Positives = 56/89 (62%)
 Frame = +3

Query: 102 LDLISWNSMISGYLRCSLVEKAREIFDSMPEKDIISWTAMISGYSQHGRFENTVGFFQKM 281
           +++I   +++  Y++C  VE A E+F+ M EK + SW A+I G + +G  E ++  F +M
Sbjct: 469 VNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEM 528

Query: 282 LVEGVKPDEITLVSVISACTHLSSLDQGK 368
              GV P+EIT + V+ AC H+  +D+G+
Sbjct: 529 KNNGVIPNEITFMGVLGACRHMGLVDEGR 557


>ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 953

 Score =  179 bits (453), Expect = 3e-43
 Identities = 81/128 (63%), Positives = 106/128 (82%)
 Frame = +3

Query: 9   SYVNLQNALIHMYSTFGDVKAAEILFNSSSHLDLISWNSMISGYLRCSLVEKAREIFDSM 188
           SY+NLQNALI+MYS  GD+  A  LF+ +  LDLISWNSMISGYL+C+LV+ A+ IFDSM
Sbjct: 409 SYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSM 468

Query: 189 PEKDIISWTAMISGYSQHGRFENTVGFFQKMLVEGVKPDEITLVSVISACTHLSSLDQGK 368
           PEKD++SW++MISGY+Q+  F+ T+  FQ+M + G KPDE TLVSVISAC  L++L+QGK
Sbjct: 469 PEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGK 528

Query: 369 WIHAYIRK 392
           W+HAYI++
Sbjct: 529 WVHAYIKR 536



 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 49/155 (31%), Positives = 80/155 (51%), Gaps = 31/155 (20%)
 Frame = +3

Query: 9   SYVNLQNALIHMYSTFGDVKAAEILFNSSSHLDLISWNSMISGYLRCSLVEKAREIFDSM 188
           S V ++N LI+ +S   ++  A  +FN SS LD +SWNS+++GY+    VE+A+ I+  M
Sbjct: 246 SDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQM 305

Query: 189 PE-------------------------------KDIISWTAMISGYSQHGRFENTVGFFQ 275
           PE                               KD+++W+A+I+ + Q+  +E  +  F 
Sbjct: 306 PERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFV 365

Query: 276 KMLVEGVKPDEITLVSVISACTHLSSLDQGKWIHA 380
            M   GV  DE+  VS +SAC +L  ++ GK IH+
Sbjct: 366 GMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHS 400



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 32/89 (35%), Positives = 54/89 (60%)
 Frame = +3

Query: 102 LDLISWNSMISGYLRCSLVEKAREIFDSMPEKDIISWTAMISGYSQHGRFENTVGFFQKM 281
           +++I   ++I  Y++C  VE A E+F  M EK I +W A+I G + +G  E+++  F  M
Sbjct: 541 INVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNM 600

Query: 282 LVEGVKPDEITLVSVISACTHLSSLDQGK 368
               V P+EIT + V+ AC H+  +D+G+
Sbjct: 601 KKCHVTPNEITFMGVLGACRHMGLVDEGQ 629


>ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 809

 Score =  179 bits (453), Expect = 3e-43
 Identities = 81/128 (63%), Positives = 106/128 (82%)
 Frame = +3

Query: 9   SYVNLQNALIHMYSTFGDVKAAEILFNSSSHLDLISWNSMISGYLRCSLVEKAREIFDSM 188
           SY+NLQNALI+MYS  GD+  A  LF+ +  LDLISWNSMISGYL+C+LV+ A+ IFDSM
Sbjct: 274 SYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSM 333

Query: 189 PEKDIISWTAMISGYSQHGRFENTVGFFQKMLVEGVKPDEITLVSVISACTHLSSLDQGK 368
           PEKD++SW++MISGY+Q+  F+ T+  FQ+M + G KPDE TLVSVISAC  L++L+QGK
Sbjct: 334 PEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGK 393

Query: 369 WIHAYIRK 392
           W+HAYI++
Sbjct: 394 WVHAYIKR 401



 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 49/155 (31%), Positives = 80/155 (51%), Gaps = 31/155 (20%)
 Frame = +3

Query: 9   SYVNLQNALIHMYSTFGDVKAAEILFNSSSHLDLISWNSMISGYLRCSLVEKAREIFDSM 188
           S V ++N LI+ +S   ++  A  +FN SS LD +SWNS+++GY+    VE+A+ I+  M
Sbjct: 111 SDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQM 170

Query: 189 PE-------------------------------KDIISWTAMISGYSQHGRFENTVGFFQ 275
           PE                               KD+++W+A+I+ + Q+  +E  +  F 
Sbjct: 171 PERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFV 230

Query: 276 KMLVEGVKPDEITLVSVISACTHLSSLDQGKWIHA 380
            M   GV  DE+  VS +SAC +L  ++ GK IH+
Sbjct: 231 GMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHS 265



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 32/89 (35%), Positives = 54/89 (60%)
 Frame = +3

Query: 102 LDLISWNSMISGYLRCSLVEKAREIFDSMPEKDIISWTAMISGYSQHGRFENTVGFFQKM 281
           +++I   ++I  Y++C  VE A E+F  M EK I +W A+I G + +G  E+++  F  M
Sbjct: 406 INVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNM 465

Query: 282 LVEGVKPDEITLVSVISACTHLSSLDQGK 368
               V P+EIT + V+ AC H+  +D+G+
Sbjct: 466 KKCHVTPNEITFMGVLGACRHMGLVDEGQ 494