BLASTX nr result
ID: Lithospermum22_contig00019075
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00019075
(1814 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal... 105 3e-61
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta... 125 6e-60
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana] 108 1e-56
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 110 4e-56
dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like ... 115 7e-51
>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
Length = 629
Score = 105 bits (263), Expect(6) = 3e-61
Identities = 54/171 (31%), Positives = 94/171 (54%)
Frame = -1
Query: 1613 EASQKSRFVFHHLCYSQRITHMTFADDMVIVASPTKQSIQIIH*SLSVFGDITSLKLNCA 1434
+A+ RF FH C + +TH+ FADD++I+ +S+ I +++F + L++N
Sbjct: 85 QAAGGKRFGFHPKCKNLGLTHLCFADDLMILTDGKVRSVDGIVEVMNLFAKRSGLQINME 144
Query: 1433 KSREFFGSLQCEEMVAICQTLHMEKGILPMKYLGIPLTSGQLTCEDFKGLTDKICSKISS 1254
K+ + + + G LP++YLG+PL + +LT ED L ++I ++I +
Sbjct: 145 KTTLYTAGVSDHNRYMMISRYPFGLGQLPVRYLGLPLVTKRLTKEDLSPLFEQIRNRIGT 204
Query: 1253 WQARHLSFGGRAQLIRSSIFGV*NFWCANLPIPKYVIQEVEKRVSTFLWAG 1101
W +R+LSF GR LI S ++ NFW + +P ++E+ S FLW+G
Sbjct: 205 WTSRYLSFAGRLNLISSVLWSTMNFWMSAFRLPSACLKEINSICSAFLWSG 255
Score = 69.7 bits (169), Expect(6) = 3e-61
Identities = 42/140 (30%), Positives = 63/140 (45%), Gaps = 1/140 (0%)
Frame = -3
Query: 1080 SKVSWKSLCLPLSE*GLGFKCMFTWSKVFLGKLLWNIASMKQTLWVQWVHSVRLKGWSIW 901
+KVSW +C P E GLG + + + V + KL+W + S +LWV+W LK S W
Sbjct: 263 AKVSWDDICKPKQEGGLGLRSLTEANVVSVLKLIWRVTSNDDSLWVKWSKMNLLKQESFW 322
Query: 900 A-XXXXXXXXXXXXKILKVRPIVRPKIQVVVGTGQNVSFWHDSWCEFGAVWEYLDDRERG 724
+ K+LK R +P +V V G SFW D+W G + + +RG
Sbjct: 323 SLTPNSSLGSWMWKKMLKYRETAKPFSRVEVNNGARTSFWFDNWSGMGHLMDVTG--QRG 380
Query: 723 YIQVPFDARLSEVGSWEFAR 664
I + + +W R
Sbjct: 381 QIDLGISRNKTVAEAWSNRR 400
Score = 63.5 bits (153), Expect(6) = 3e-61
Identities = 28/63 (44%), Positives = 42/63 (66%)
Frame = -2
Query: 1801 METMQFPQRFIYLLKQCV*TAKFSVHVNGTLKGWFGSTRGLRQGDPISSYLFLLVLEVFN 1622
+ M FP FI+ + +C+ T FSV VNG L G+F S RG+RQG +S YLF++ +EV +
Sbjct: 21 LSAMNFPGEFIHWISRCITTTSFSVQVNGELAGYFRSARGIRQGCALSPYLFVISMEVLS 80
Query: 1621 GIM 1613
++
Sbjct: 81 KML 83
Score = 45.4 bits (106), Expect(6) = 3e-61
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = -3
Query: 420 RLHRWGIQVDQQCVFCG-DIESHEHLFFACVFSGQVWLMILQKLNEYRGAREW 265
R+ W D +C FC IE+ +HLFF+C ++ +W I + + ++R + +W
Sbjct: 492 RMQLWNNGSDVKCTFCSTSIETRDHLFFSCSYASAIWTAIAKNVLQHRFSTDW 544
Score = 39.3 bits (90), Expect(6) = 3e-61
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = -1
Query: 602 EGADLWLWNA---AETYVHNKVWGEVRYREVKVGWTRWLWNNHGILRHSFIVWLLFQNML 432
E A LW ++ W +VR + +V W + +W +H ++ F WL +N L
Sbjct: 428 EDATLWRGKGDVFKTSFSTKDTWNQVRKKSNEVAWYKGVWFSHSTPKYQFCTWLALRNRL 487
Query: 431 ST 426
ST
Sbjct: 488 ST 489
Score = 22.3 bits (46), Expect(6) = 3e-61
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 235 LRQCIKQVAFTSTVAMVWWERNNK 164
+R + + F TV VW ERN++
Sbjct: 559 IRSFLSRYIFQLTVHTVWKERNDR 582
>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1352
Score = 125 bits (314), Expect(3) = 6e-60
Identities = 63/171 (36%), Positives = 100/171 (58%)
Frame = -1
Query: 1613 EASQKSRFVFHHLCYSQRITHMTFADDMVIVASPTKQSIQIIH*SLSVFGDITSLKLNCA 1434
+A+ + + +H C + +TH+ FADD+++ + T +SIQ F ++ LK++
Sbjct: 827 KAAVEKKISYHPRCRNMNLTHLCFADDIMVFSDGTSKSIQGTLAIFEKFAAMSWLKISLE 886
Query: 1433 KSREFFGSLQCEEMVAICQTLHMEKGILPMKYLGIPLTSGQLTCEDFKGLTDKICSKISS 1254
KS F + +I Q E G LP+KYLG+PL + ++T D+ L +KI ++I+S
Sbjct: 887 KSTIFMAGISPNAKTSILQQFPFELGTLPVKYLGLPLLTKRMTQSDYLPLVEKIRARITS 946
Query: 1253 WQARHLSFGGRAQLIRSSIFGV*NFWCANLPIPKYVIQEVEKRVSTFLWAG 1101
W R LSF GR QLI+S + + NFW + +PK +QE+EK S FLW+G
Sbjct: 947 WTNRFLSFAGRLQLIKSVLSSITNFWLSVFRLPKACLQEIEKMFSAFLWSG 997
Score = 94.4 bits (233), Expect(3) = 6e-60
Identities = 74/303 (24%), Positives = 124/303 (40%), Gaps = 29/303 (9%)
Frame = -3
Query: 1080 SKVSWKSLCLPLSE*GLGFKCMFTWSKVFLGKLLWNIASMKQTLWVQWVHSVRLKGWSIW 901
+K++W +C E GLG K + ++V L KL+W I S + +LWV+WV+ ++ + W
Sbjct: 1005 AKIAWSEVCKLKEEGGLGLKPLKEANEVSLLKLIWRILSARDSLWVKWVNKHLIRKETFW 1064
Query: 900 A-XXXXXXXXXXXXKILKVRPIVRPKIQVVVGTGQNVSFWHDSWCEFGAVWEYLDDRERG 724
+ KILK R R ++ V +G SFWHD WC G + +++ R
Sbjct: 1065 SVKENTGLGSWLWRKILKQRDKARLFHRMEVRSGTFTSFWHDHWCPLGRLHQHMGSRGTI 1124
Query: 723 YIQVPFDARLSEV------------------GSWEFARW*EDSKNSAGL---------QS 625
+ +P +A ++EV E AR + L S
Sbjct: 1125 DLGIPNNATVAEVMNTHRRKRHRADFLNQIKSQIELARQDRSTDGDRSLWKQKEDTFKSS 1184
Query: 624 FLYAAVYGGS*FVVMECC*NLRT**XXXXXXXXXXXGWLDQVAVEQSWDTSAFIYCLAVV 445
F + + + + C W V S +F+ LA
Sbjct: 1185 FSSSKTWQQIRSISLRC-------------------DWYRGVWFSASTPKYSFVTWLAFH 1225
Query: 444 SKHAEHQDRLHRWGIQVDQQCVFCG-DIESHEHLFFACVFSGQVWLMILQKLNEYRGARE 268
++ D++ +W CVFCG ++E+ +HLFF+C +S VW + + L R
Sbjct: 1226 NR-LTTSDKICKWNSGARYDCVFCGEELETRDHLFFSCPYSSHVWFSLTKGLLNGRNILN 1284
Query: 267 WSM 259
W++
Sbjct: 1285 WNL 1287
Score = 60.8 bits (146), Expect(3) = 6e-60
Identities = 27/61 (44%), Positives = 42/61 (68%)
Frame = -2
Query: 1804 VMETMQFPQRFIYLLKQCV*TAKFSVHVNGTLKGWFGSTRGLRQGDPISSYLFLLVLEVF 1625
V++ + P+ FI+ ++ C+ TA FSV VNG L G+F S RGLRQG +S YL+++ + V
Sbjct: 762 VLKAIHLPEMFIHWIELCIGTASFSVQVNGELSGFFRSERGLRQGCSLSPYLYVICMNVL 821
Query: 1624 N 1622
+
Sbjct: 822 S 822
>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
Length = 740
Score = 108 bits (271), Expect(4) = 1e-56
Identities = 57/162 (35%), Positives = 87/162 (53%)
Frame = -1
Query: 1586 FHHLCYSQRITHMTFADDMVIVASPTKQSIQIIH*SLSVFGDITSLKLNCAKSREFFGSL 1407
+H C +TH+ FADD+++ ++S++ + F + L ++ KS + +
Sbjct: 262 YHPKCKKLSLTHLCFADDLMVFIDGQQRSVEGVINIFKEFAGKSGLHISLEKSTLYLAGV 321
Query: 1406 QCEEMVAICQTLHMEKGILPMKYLGIPLTSGQLTCEDFKGLTDKICSKISSWQARHLSFG 1227
I G LP++YLG+PL + Q+T D+ L DK+ SKISSW AR LS+
Sbjct: 322 SELNRNNILSAFPFASGQLPVRYLGLPLLTKQMTTADYSPLLDKVRSKISSWTARSLSYA 381
Query: 1226 GRAQLIRSSIFGV*NFWCANLPIPKYVIQEVEKRVSTFLWAG 1101
GR LI S I + NFW + +P I+E+EK S FLW+G
Sbjct: 382 GRLALINSVIVSLSNFWMSAYRLPAGCIKEIEKLCSAFLWSG 423
Score = 77.0 bits (188), Expect(4) = 1e-56
Identities = 40/133 (30%), Positives = 69/133 (51%), Gaps = 1/133 (0%)
Frame = -3
Query: 1080 SKVSWKSLCLPLSE*GLGFKCMFTWSKVFLGKLLWNIASMKQTLWVQWVHSVRLKGWSIW 901
+K++W SLC E GLG K + +KV KL+W + S + +LWV WV + ++ S W
Sbjct: 431 AKITWTSLCKLKQEGGLGIKSLLEANKVSCLKLIWRLVSRQSSLWVNWVWTYIIRKGSFW 490
Query: 900 -AXXXXXXXXXXXXKILKVRPIVRPKIQVVVGTGQNVSFWHDSWCEFGAVWEYLDDRERG 724
A K+LK R + + +V + +G + SFW+D+W + G + + + R
Sbjct: 491 SANDRSSLGSWMWKKLLKYRDVAKSMCKVEIKSGSSTSFWYDNWSQLGQLVDVTNARRTI 550
Query: 723 YIQVPFDARLSEV 685
+ +P A ++ V
Sbjct: 551 DMGIPLAATVATV 563
Score = 67.0 bits (162), Expect(4) = 1e-56
Identities = 30/60 (50%), Positives = 42/60 (70%)
Frame = -2
Query: 1801 METMQFPQRFIYLLKQCV*TAKFSVHVNGTLKGWFGSTRGLRQGDPISSYLFLLVLEVFN 1622
+E + FP+ F + +K C+ TA FSV VNG L G+FGS RGLRQG +S YLF++ + V +
Sbjct: 189 LEALNFPENFCHWIKLCISTATFSVQVNGELAGFFGSKRGLRQGCALSPYLFVICMNVLS 248
Score = 37.0 bits (84), Expect(4) = 1e-56
Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Frame = -1
Query: 593 DLWLW-----NAAETYVHNKVWGEVRYREVKVGWTRWLWNNHGILRHSFIVWLLFQNMLS 429
D++LW N ++++ W +R W + +W ++ ++SF++WL + LS
Sbjct: 597 DIFLWRSSGDNFRQSFITKVTWHNIRVIHTHRQWYKGVWFSYNTPKYSFLLWLAIHDRLS 656
Query: 428 T 426
T
Sbjct: 657 T 657
>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1529
Score = 110 bits (275), Expect(3) = 4e-56
Identities = 57/173 (32%), Positives = 92/173 (53%)
Frame = -1
Query: 1613 EASQKSRFVFHHLCYSQRITHMTFADDMVIVASPTKQSIQIIH*SLSVFGDITSLKLNCA 1434
EA+ +H C +TH+ FADD+++ + SI+ + F + L+++
Sbjct: 977 EAAVHRNIGYHPKCEKIGLTHLCFADDLMVFVDGHQWSIEGVINVFKEFAGRSGLQISLE 1036
Query: 1433 KSREFFGSLQCEEMVAICQTLHMEKGILPMKYLGIPLTSGQLTCEDFKGLTDKICSKISS 1254
KS + + + V + G LP++YLG+PL + Q+T D+ L + + +KISS
Sbjct: 1037 KSTIYLAGVSASDRVQTLSSFPFANGQLPVRYLGLPLLTKQMTTADYSPLIEAVKTKISS 1096
Query: 1253 WQARHLSFGGRAQLIRSSIFGV*NFWCANLPIPKYVIQEVEKRVSTFLWAGKV 1095
W AR LS+ GR L+ S I + NFW + +P I+E+EK S FLW+G V
Sbjct: 1097 WTARSLSYAGRLALLNSVIVSIANFWMSAYRLPAGCIREIEKLCSAFLWSGPV 1149
Score = 90.9 bits (224), Expect(3) = 4e-56
Identities = 71/293 (24%), Positives = 121/293 (41%), Gaps = 20/293 (6%)
Frame = -3
Query: 1080 SKVSWKSLCLPLSE*GLGFKCMFTWSKVFLGKLLWNIASMKQTLWVQWVHSVRLKGWSIW 901
+K++W S+C P E GLG K + +KV KL+W + S + +LWV W+ + ++ + W
Sbjct: 1155 AKIAWSSICQPKKEGGLGIKSLAEANKVSCLKLIWRLLSTQPSLWVTWIWTFIIRKGTFW 1214
Query: 900 -AXXXXXXXXXXXXKILKVRPIVRPKIQVVVGTGQNVSFWHDSWCEFGAVWEYLDDRERG 724
A K+LK R + + +V V G + SFW+D W G + + R
Sbjct: 1215 SANERSSLGSWMWKKLLKYRELAKSMHKVEVRNGSSTSFWYDHWSHLGRLLDITGTRRVI 1274
Query: 723 YIQVPFDARLSEV----------------GSWEFARW*EDSKNSAGLQSFLYAAVYG--G 598
+ +P + L V + E R + + AG L+ ++
Sbjct: 1275 DLGIPLETNLETVLRTHQHRQHRAAIYNRINAEIQRL-QQQEREAGPDISLWRSLKNDFN 1333
Query: 597 S*FVVMECC*NLRT**XXXXXXXXXXXGWLDQVAVEQSWDTSAFIYCLAVVSKHAEHQDR 418
F+ N+RT W V S +F+ L V ++ DR
Sbjct: 1334 KRFITKVTWNNVRT--------HQPQQNWYKGVWFPYSTPKYSFLLWLTVQNR-LSTGDR 1384
Query: 417 LHRWGIQVDQQCVFCGDI-ESHEHLFFACVFSGQVWLMILQKLNEYRGAREWS 262
+ W C C + E+ +HLFF+C ++ VW + Q+L +R+W+
Sbjct: 1385 IKAWNSGQLVTCTLCNNAEETRDHLFFSCQYTSYVWEALTQRLLSTNYSRDWN 1437
Score = 66.6 bits (161), Expect(3) = 4e-56
Identities = 30/60 (50%), Positives = 43/60 (71%)
Frame = -2
Query: 1801 METMQFPQRFIYLLKQCV*TAKFSVHVNGTLKGWFGSTRGLRQGDPISSYLFLLVLEVFN 1622
+E + FP+ F + +K C+ TA FSV VNG L G+FGS+RGLRQG +S YLF++ + V +
Sbjct: 913 LEALNFPETFRHWIKLCISTATFSVQVNGELAGFFGSSRGLRQGCALSPYLFVICMNVLS 972
>dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 489
Score = 115 bits (288), Expect(3) = 7e-51
Identities = 57/171 (33%), Positives = 95/171 (55%)
Frame = -1
Query: 1613 EASQKSRFVFHHLCYSQRITHMTFADDMVIVASPTKQSIQIIH*SLSVFGDITSLKLNCA 1434
+A+ + RF +H C +TH++FADD+++++ +SI+ I F + L+++
Sbjct: 62 KATGQRRFGYHPRCKQMGLTHLSFADDLMVLSDGKVRSIEGIVEVFETFAKCSGLRISME 121
Query: 1433 KSREFFGSLQCEEMVAICQTLHMEKGILPMKYLGIPLTSGQLTCEDFKGLTDKICSKISS 1254
KS +F L + G LP++YLG+PL + QL+ D+ L + I KI S
Sbjct: 122 KSTVYFAGLSHTSPQEVMAHFPFAVGTLPVRYLGLPLVTKQLSSTDYLPLIEHIKKKIGS 181
Query: 1253 WQARHLSFGGRAQLIRSSIFGV*NFWCANLPIPKYVIQEVEKRVSTFLWAG 1101
W AR LS+ GR LI S ++ + NFW +P+ I+E++K S +LW+G
Sbjct: 182 WSARFLSYAGRLNLISSVLWSICNFWMGAFRLPRECIREIDKMCSAYLWSG 232
Score = 72.4 bits (176), Expect(3) = 7e-51
Identities = 40/136 (29%), Positives = 63/136 (46%), Gaps = 1/136 (0%)
Frame = -3
Query: 1080 SKVSWKSLCLPLSE*GLGFKCMFTWSKVFLGKLLWNIASMKQTLWVQWVHSVRLKGWSIW 901
+K++W +C P E GLG + + + V KL+W I S +LWV+W+H+ LK S W
Sbjct: 240 AKIAWTDVCKPKDEGGLGLRSLKEANDVSCLKLIWRIISHADSLWVKWIHATLLKQVSFW 299
Query: 900 A-XXXXXXXXXXXXKILKVRPIVRPKIQVVVGTGQNVSFWHDSWCEFGAVWEYLDDRERG 724
A K+LK R + V G + FW+D+W + G + + D RG
Sbjct: 300 AVRENTSLGSWMWKKVLKFRDAAIQLCKAEVNNGAHTFFWYDNWSDMGRLIDIAGD--RG 357
Query: 723 YIQVPFDARLSEVGSW 676
I + + +W
Sbjct: 358 VIDMGIKKHATMADAW 373
Score = 62.4 bits (150), Expect(3) = 7e-51
Identities = 30/60 (50%), Positives = 41/60 (68%)
Frame = -2
Query: 1792 MQFPQRFIYLLKQCV*TAKFSVHVNGTLKGWFGSTRGLRQGDPISSYLFLLVLEVFNGIM 1613
M+FP FI+ + CV TA F V VNG L G+F STRGLRQG +S YLF++ + V + ++
Sbjct: 1 MEFPPVFIHWIMLCVTTASFLVQVNGELAGYFNSTRGLRQGCSLSPYLFVVSMNVLSKLL 60