BLASTX nr result

ID: Lithospermum22_contig00019033 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00019033
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330818.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10
ref|XP_002332094.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10
emb|CBI17917.3| unnamed protein product [Vitis vinifera]               64   1e-08
ref|XP_002264417.1| PREDICTED: KH domain-containing protein At4g...    64   1e-08
ref|XP_002527979.1| Poly(rC)-binding protein, putative [Ricinus ...    60   1e-07

>ref|XP_002330818.1| predicted protein [Populus trichocarpa] gi|222872620|gb|EEF09751.1|
           predicted protein [Populus trichocarpa]
          Length = 405

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 31/50 (62%), Positives = 40/50 (80%)
 Frame = -3

Query: 416 EIKGTSSQVEAAEQLIQDFINNHKEPVSSIYGRSDLGLSSLSHLTDAKYP 267
           EIKGT +QV+ A+QLIQ+FI NHKEP SS+YG+ D GLS+ SH+ +  YP
Sbjct: 335 EIKGTGAQVQMAQQLIQEFITNHKEPASSMYGKIDAGLSAYSHMAETGYP 384


>ref|XP_002332094.1| predicted protein [Populus trichocarpa] gi|222874914|gb|EEF12045.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 29/50 (58%), Positives = 42/50 (84%)
 Frame = -3

Query: 416 EIKGTSSQVEAAEQLIQDFINNHKEPVSSIYGRSDLGLSSLSHLTDAKYP 267
           EIKGTSSQV+ A+QLIQ+FI+NHKEP  ++YG+ D+GL++ S + ++ YP
Sbjct: 376 EIKGTSSQVQMAQQLIQEFISNHKEPTPNMYGKIDVGLNAYSQIAESGYP 425


>emb|CBI17917.3| unnamed protein product [Vitis vinifera]
          Length = 364

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 33/50 (66%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
 Frame = -3

Query: 416 EIKGTSSQVEAAEQLIQDFINNHKEPVSSIYGRSDLGL-SSLSHLTDAKY 270
           EIKGTSSQV+ A+QLIQ+FI+NHKEPV S YG+ D GL SS S L +  Y
Sbjct: 288 EIKGTSSQVQTAQQLIQEFISNHKEPVPSSYGKMDSGLRSSYSQLGNTSY 337


>ref|XP_002264417.1| PREDICTED: KH domain-containing protein At4g18375 isoform 1 [Vitis
           vinifera]
          Length = 466

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 33/50 (66%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
 Frame = -3

Query: 416 EIKGTSSQVEAAEQLIQDFINNHKEPVSSIYGRSDLGL-SSLSHLTDAKY 270
           EIKGTSSQV+ A+QLIQ+FI+NHKEPV S YG+ D GL SS S L +  Y
Sbjct: 390 EIKGTSSQVQTAQQLIQEFISNHKEPVPSSYGKMDSGLRSSYSQLGNTSY 439


>ref|XP_002527979.1| Poly(rC)-binding protein, putative [Ricinus communis]
           gi|223532605|gb|EEF34391.1| Poly(rC)-binding protein,
           putative [Ricinus communis]
          Length = 416

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 27/50 (54%), Positives = 37/50 (74%)
 Frame = -3

Query: 416 EIKGTSSQVEAAEQLIQDFINNHKEPVSSIYGRSDLGLSSLSHLTDAKYP 267
           EIKGT+SQV+ A+QLIQ+FI+N KE    IYG+ D G SS + + ++ YP
Sbjct: 352 EIKGTASQVQMAQQLIQEFISNQKESTPGIYGKMDTGYSSYTQVAESSYP 401


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