BLASTX nr result

ID: Lithospermum22_contig00019003 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00019003
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_568832.1| uncharacterized protein [Arabidopsis thaliana] ...    88   8e-16
ref|XP_002866119.1| EMB2731 [Arabidopsis lyrata subsp. lyrata] g...    88   8e-16
gb|AAM64789.1| unknown [Arabidopsis thaliana]                          88   8e-16
ref|XP_002300390.1| predicted protein [Populus trichocarpa] gi|2...    86   3e-15
ref|XP_002300389.1| predicted protein [Populus trichocarpa] gi|2...    86   3e-15

>ref|NP_568832.1| uncharacterized protein [Arabidopsis thaliana]
           gi|18202899|sp|Q9FG71.1|EMC89_ARATH RecName: Full=ER
           membrane protein complex subunit 8/9 homolog; AltName:
           Full=Protein EMBRYO DEFECTIVE 2731
           gi|9758214|dbj|BAB08659.1| unnamed protein product
           [Arabidopsis thaliana] gi|18086571|gb|AAL57709.1|
           AT5g55940/MYN21_5 [Arabidopsis thaliana]
           gi|21689597|gb|AAM67420.1| AT5g55940/MYN21_5
           [Arabidopsis thaliana] gi|110741034|dbj|BAE98611.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332009318|gb|AED96701.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 208

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 41/65 (63%), Positives = 55/65 (84%), Gaps = 3/65 (4%)
 Frame = -2

Query: 187 EMGYEIHQNAYIKLLLHAVKHRTSSVNGVLIGRV---NDGATEIVDSVPLFHSQINVLPP 17
           E+ YEI QNAYIKL+LH+++H+T++VNGVL+GR+   +DG  EI DSVPLFHS + +LPP
Sbjct: 8   ELKYEISQNAYIKLVLHSLRHKTAAVNGVLVGRISPKDDGVVEISDSVPLFHSNLALLPP 67

Query: 16  LEIAL 2
           LEI+L
Sbjct: 68  LEISL 72


>ref|XP_002866119.1| EMB2731 [Arabidopsis lyrata subsp. lyrata]
           gi|297311954|gb|EFH42378.1| EMB2731 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 208

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 41/65 (63%), Positives = 55/65 (84%), Gaps = 3/65 (4%)
 Frame = -2

Query: 187 EMGYEIHQNAYIKLLLHAVKHRTSSVNGVLIGRV---NDGATEIVDSVPLFHSQINVLPP 17
           E+ YEI QNAYIKL+LH+++H+T++VNGVL+GR+   +DG  EI DSVPLFHS + +LPP
Sbjct: 8   ELKYEISQNAYIKLVLHSLRHKTAAVNGVLVGRISHKDDGVVEISDSVPLFHSNLALLPP 67

Query: 16  LEIAL 2
           LEI+L
Sbjct: 68  LEISL 72


>gb|AAM64789.1| unknown [Arabidopsis thaliana]
          Length = 206

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 41/65 (63%), Positives = 55/65 (84%), Gaps = 3/65 (4%)
 Frame = -2

Query: 187 EMGYEIHQNAYIKLLLHAVKHRTSSVNGVLIGRV---NDGATEIVDSVPLFHSQINVLPP 17
           E+ YEI QNAYIKL+LH+++H+T++VNGVL+GR+   +DG  EI DSVPLFHS + +LPP
Sbjct: 6   ELKYEISQNAYIKLVLHSLRHKTAAVNGVLVGRISPKDDGVVEISDSVPLFHSNLALLPP 65

Query: 16  LEIAL 2
           LEI+L
Sbjct: 66  LEISL 70


>ref|XP_002300390.1| predicted protein [Populus trichocarpa] gi|222847648|gb|EEE85195.1|
           predicted protein [Populus trichocarpa]
          Length = 204

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 38/62 (61%), Positives = 51/62 (82%)
 Frame = -2

Query: 187 EMGYEIHQNAYIKLLLHAVKHRTSSVNGVLIGRVNDGATEIVDSVPLFHSQINVLPPLEI 8
           E+ YEI QNAYIKL+LH++KH+TS+VNGV +G   D   +I+DSVPLFH+ + +LPPLEI
Sbjct: 7   ELRYEISQNAYIKLVLHSLKHKTSAVNGVFVGSSCDDGVQIIDSVPLFHNHLGLLPPLEI 66

Query: 7   AL 2
           +L
Sbjct: 67  SL 68


>ref|XP_002300389.1| predicted protein [Populus trichocarpa] gi|222847647|gb|EEE85194.1|
           predicted protein [Populus trichocarpa]
          Length = 204

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 38/62 (61%), Positives = 51/62 (82%)
 Frame = -2

Query: 187 EMGYEIHQNAYIKLLLHAVKHRTSSVNGVLIGRVNDGATEIVDSVPLFHSQINVLPPLEI 8
           E+ YEI QNAYIKL+LH++KH+TS+VNGV +G   D   +I+DSVPLFH+ + +LPPLEI
Sbjct: 7   ELRYEISQNAYIKLVLHSLKHKTSAVNGVFVGSSCDDGVQIIDSVPLFHNHLGLLPPLEI 66

Query: 7   AL 2
           +L
Sbjct: 67  SL 68


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