BLASTX nr result

ID: Lithospermum22_contig00018970 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00018970
         (210 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302590.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
ref|XP_002511871.1| ubiquitin-protein ligase, putative [Ricinus ...    94   9e-18
ref|XP_003534559.1| PREDICTED: SKP1-like protein 21-like [Glycin...    94   1e-17
ref|XP_003551663.1| PREDICTED: SKP1-like protein 21-like [Glycin...    93   2e-17
ref|XP_003623972.1| SKP1-like protein [Medicago truncatula] gi|3...    91   1e-16

>ref|XP_002302590.1| predicted protein [Populus trichocarpa] gi|222844316|gb|EEE81863.1|
           predicted protein [Populus trichocarpa]
          Length = 345

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 50/70 (71%), Positives = 53/70 (75%)
 Frame = -1

Query: 210 PDDLTEEEKLEPLKNTMDDPRIRLLNRLYAXXXXXXXXXXXXKNAQNEEEIVDDRPLDDL 31
           PDDLTEEEKLEPLKNT DDPRIRLLNRLYA            KN + EEE VDDR +DDL
Sbjct: 146 PDDLTEEEKLEPLKNTTDDPRIRLLNRLYAKKRKELKEREKLKNVEAEEEHVDDRSVDDL 205

Query: 30  LSFINGGNGD 1
           LSFINGG+GD
Sbjct: 206 LSFINGGDGD 215


>ref|XP_002511871.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223549051|gb|EEF50540.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 359

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 48/68 (70%), Positives = 51/68 (75%)
 Frame = -1

Query: 210 PDDLTEEEKLEPLKNTMDDPRIRLLNRLYAXXXXXXXXXXXXKNAQNEEEIVDDRPLDDL 31
           PDDLTEEEKLEPLKNT DDPRIRLLNRLYA            KN + +EE VDDR +DDL
Sbjct: 138 PDDLTEEEKLEPLKNTTDDPRIRLLNRLYAKKRKELKERQKLKNVEAQEECVDDRSVDDL 197

Query: 30  LSFINGGN 7
           LSFINGGN
Sbjct: 198 LSFINGGN 205


>ref|XP_003534559.1| PREDICTED: SKP1-like protein 21-like [Glycine max]
          Length = 347

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 48/70 (68%), Positives = 52/70 (74%)
 Frame = -1

Query: 210 PDDLTEEEKLEPLKNTMDDPRIRLLNRLYAXXXXXXXXXXXXKNAQNEEEIVDDRPLDDL 31
           PDDLTEEEKLEPLKNT DDPRIRLLNRLYA            KN + EEE VD+R +DDL
Sbjct: 146 PDDLTEEEKLEPLKNTTDDPRIRLLNRLYAKKRKELKERERLKNVEAEEEHVDERSVDDL 205

Query: 30  LSFINGGNGD 1
           LSFING +GD
Sbjct: 206 LSFINGNDGD 215


>ref|XP_003551663.1| PREDICTED: SKP1-like protein 21-like [Glycine max]
          Length = 383

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 48/70 (68%), Positives = 52/70 (74%)
 Frame = -1

Query: 210 PDDLTEEEKLEPLKNTMDDPRIRLLNRLYAXXXXXXXXXXXXKNAQNEEEIVDDRPLDDL 31
           PDDLTEEEKLEPLKNT DDPRIRLLNRLYA            KN + EEE VD+R +DDL
Sbjct: 146 PDDLTEEEKLEPLKNTTDDPRIRLLNRLYAKKRKELRERERLKNVEVEEEHVDERSVDDL 205

Query: 30  LSFINGGNGD 1
           LSFING +GD
Sbjct: 206 LSFINGNDGD 215


>ref|XP_003623972.1| SKP1-like protein [Medicago truncatula] gi|355498987|gb|AES80190.1|
           SKP1-like protein [Medicago truncatula]
          Length = 385

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 47/70 (67%), Positives = 51/70 (72%)
 Frame = -1

Query: 210 PDDLTEEEKLEPLKNTMDDPRIRLLNRLYAXXXXXXXXXXXXKNAQNEEEIVDDRPLDDL 31
           PDDLTEEEKLEPLKNT DDPRIRLLNRLYA            KN + EEE VD+R +DDL
Sbjct: 146 PDDLTEEEKLEPLKNTTDDPRIRLLNRLYAKKRKELKERGRLKNVELEEEHVDERSVDDL 205

Query: 30  LSFINGGNGD 1
           LSFING + D
Sbjct: 206 LSFINGNDAD 215


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