BLASTX nr result
ID: Lithospermum22_contig00018936
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00018936
(2001 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN63504.1| hypothetical protein VITISV_011679 [Vitis vinifera] 258 3e-66
emb|CBI28171.3| unnamed protein product [Vitis vinifera] 253 1e-64
ref|XP_002524463.1| nucleic acid binding protein, putative [Rici... 253 1e-64
ref|XP_003550828.1| PREDICTED: zinc finger CCCH domain-containin... 236 2e-59
ref|XP_003525663.1| PREDICTED: zinc finger CCCH domain-containin... 235 4e-59
>emb|CAN63504.1| hypothetical protein VITISV_011679 [Vitis vinifera]
Length = 554
Score = 258 bits (660), Expect = 3e-66
Identities = 204/574 (35%), Positives = 268/574 (46%), Gaps = 74/574 (12%)
Frame = -2
Query: 1949 MEEDLQKRNTDCVYFLASPLTCKKGSECEYRHSEMARLNPRDCYYWLSGTCLNASCAFRH 1770
ME++LQKRNTDCVYFLASPLTCKKG +CEYRHSE ARLNPRDC+YWLSG+CLN +CAFRH
Sbjct: 1 MEDELQKRNTDCVYFLASPLTCKKGMDCEYRHSEGARLNPRDCWYWLSGSCLNPACAFRH 60
Query: 1769 P-----------------------PLDGGRXXXXXXXXXXXTPNVSAVSVTKTNVPCYYF 1659
P PLDG + S+V V KTN PCY++
Sbjct: 61 PVRVMLKRIQRDSRSGLLEEKVHLPLDG---HIEASSEPVTLSHHSSVPVNKTNTPCYFY 117
Query: 1658 YNGYCNKGELCTFMHGPVPSNNVHTQKYSNARPNSDGPPVEKKGSAGSDTGSAPGAKSFR 1479
YNG+CNKGE C+F+HGP S+ + A +D P E AG++TG P R
Sbjct: 118 YNGFCNKGERCSFLHGP-DSSAPAWKSLKTASEVNDMRPPENNXIAGTETG--PTLIGRR 174
Query: 1478 TGNQQT-TRRPVMRKESELENLQPSPSKVA-KRSASPCTPRSIYEDAAADGSISPVAAAG 1305
+ +T T + + E+LQ K A ++S+SP S YE+AAA S S + A G
Sbjct: 175 PNSVETATVTAIETQFQPKEDLQKLVFKNAFEQSSSPQISMSEYEEAAAVRSDSLLPAEG 234
Query: 1304 ---------------------SVPRSPHASSPGFDVLVDNGSDELVYEDDYNYVVDHDGD 1188
P SSPGFDVLVDN S+ LVYED+ Y++ +G+
Sbjct: 235 FNQSRSLLSTDQSSEEQVDGPIEPEERWESSPGFDVLVDNISENLVYEDEPEYLLALEGE 294
Query: 1187 SGEPVAD--EYDFKGRTIDDPEYTGSAIFYEKERHEYDYHFGAQDSLXXXXXXXXXXXXX 1014
E YDF+ D Y + I Y+ H F D+
Sbjct: 295 GRELNGQFLGYDFEDPVEYDLMYPEAEILYD---HRIYDSFDCLDN---------EHRRE 342
Query: 1013 XXXXXXXXXXXXXXRGQAYNGLHSVDLRDRLKRRRMTDDRSHNAYS-------------G 873
A G +DLRDRL++RR+TD + +S
Sbjct: 343 FWILFCPGKRKNFPVELAVTGRSGLDLRDRLRKRRVTDGHTVTRFSRRHDSSCLIGRTRE 402
Query: 872 XXXXXXXXXXXXXXXRYQVERHIRRPMELNNSRSHIGH-EGRFTRSSFDKSRL------- 717
+V ++I + N + S+ G+ +G RS KSR
Sbjct: 403 RRRRHGMDQQLQGRSASEVRKNIIGMLSENETLSNRGNKQGWVRRSRLPKSRQHYKEKGH 462
Query: 716 QQKPQLSSKVSGNAADRKRSYAEESVVFKGPKTLAQIKDEK-----NRRGSREPSESSLD 552
Q+ +SS+ S R+R E F GPK+LAQIK+EK N G + SS
Sbjct: 463 SQRQHISSEDSRKPVSRERISTREYTTFTGPKSLAQIKEEKRKAEENGEGFGKMGYSSNT 522
Query: 551 GLLDDNFVAPKTLSEILEEKRRLGSLVNGNNDSS 450
D F PK LSEIL++KR+LGS ++GN SS
Sbjct: 523 PSAD--FQGPKPLSEILKDKRKLGSAMDGNIISS 554
>emb|CBI28171.3| unnamed protein product [Vitis vinifera]
Length = 573
Score = 253 bits (646), Expect = 1e-64
Identities = 191/539 (35%), Positives = 248/539 (46%), Gaps = 50/539 (9%)
Frame = -2
Query: 1949 MEEDLQKRNTDCVYFLASPLTCKKGSECEYRHSEMARLNPRDCYYWLSGTCLNASCAFRH 1770
ME++LQKRNTDCVYFLASPLTCKKG +CEYRHSE ARLNPRDC+YWLSG+CLN +CAFRH
Sbjct: 1 MEDELQKRNTDCVYFLASPLTCKKGMDCEYRHSEGARLNPRDCWYWLSGSCLNPACAFRH 60
Query: 1769 PPLDGGRXXXXXXXXXXXTPNVSAVSVTKTNVPCYYFYNGYCNKGELCTFMHGPVPSNNV 1590
PPLDG + S+V V KTN PCY++YNG+CNKGE C+F+HGP +
Sbjct: 61 PPLDG---HIEASSEPVTLSHHSSVPVNKTNTPCYFYYNGFCNKGERCSFLHGPDSTGTE 117
Query: 1589 HTQKYSNARPNSDGPPVEKKGSAGSDTGSAPGAKSFRTGNQQTTRRPVMRKESELENLQP 1410
RPNS VE +T P E+LQ
Sbjct: 118 TGPTLIGRRPNS----VETATVTAIETQFQP-----------------------KEDLQK 150
Query: 1409 SPSKVA-KRSASPCTPRSIYEDAAADGSISPVAAAG---------------------SVP 1296
K A ++S+SP S YE+AAA S S + A G P
Sbjct: 151 LVFKNAFEQSSSPQISMSEYEEAAAVRSDSLLPAEGFNQSRSLLSTDQSSEEQVDGPIEP 210
Query: 1295 RSPHASSPGFDVLVDNGSDELVYEDDYNYVVDHDGDSGEPVAD--EYDFKGRTIDDPEYT 1122
SSPGFDVLVDN S+ LVYED+ Y++ +G+ E YDF+ D Y
Sbjct: 211 EERWESSPGFDVLVDNISENLVYEDEPEYLLALEGEGRELNGQFLGYDFEDPVEYDLMYP 270
Query: 1121 GSAIFYEKERHEYDYHFGAQDSLXXXXXXXXXXXXXXXXXXXXXXXXXXXRGQAYNGLHS 942
+ I Y+ ++ + S A G
Sbjct: 271 EAEILYDHRIYDSFDCLDNEHSSDHVRNIPGCSRERILDPILPRKRKNFPVELAVTGRSG 330
Query: 941 VDLRDRLKRRRMTDDRSHNAYS-------------GXXXXXXXXXXXXXXXRYQVERHIR 801
+DLRDRL++RR+TD + +S +V ++I
Sbjct: 331 LDLRDRLRKRRVTDGHTVTRFSRRHDSSCLIGRTRERRRRHGMDQQLQGRSASEVRKNII 390
Query: 800 RPMELNNSRSHIGH-EGRFTRSSFDKSRL-------QQKPQLSSKVSGNAADRKRSYAEE 645
+ N + S+ G+ +G RS KSR Q+ +SS+ S R+R E
Sbjct: 391 GMLSENETLSNRGNKQGWVRRSRLPKSRQHYKEKGHSQRQHISSEDSRKPVSRERISTRE 450
Query: 644 SVVFKGPKTLAQIKDEK-----NRRGSREPSESSLDGLLDDNFVAPKTLSEILEEKRRL 483
F GPK+LAQIK+EK N G + SS D F PK LSEIL++KR+L
Sbjct: 451 YTTFTGPKSLAQIKEEKRKAEENGEGFGKMGYSSNTPSAD--FQGPKPLSEILKDKRKL 507
>ref|XP_002524463.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223536251|gb|EEF37903.1| nucleic acid binding protein,
putative [Ricinus communis]
Length = 530
Score = 253 bits (646), Expect = 1e-64
Identities = 190/550 (34%), Positives = 255/550 (46%), Gaps = 57/550 (10%)
Frame = -2
Query: 1955 LKMEEDLQKRNTDCVYFLASPLTCKKGSECEYRHSEMARLNPRDCYYWLSGTCLNASCAF 1776
++MEED+QKRNTDCVYFLASPLTCKKG ECEYRH+E+ARLNPRDC+YWL+G C N +CAF
Sbjct: 1 MQMEEDIQKRNTDCVYFLASPLTCKKGLECEYRHNEIARLNPRDCWYWLAGDCYNPTCAF 60
Query: 1775 RHPPLDGGRXXXXXXXXXXXTPNVSAVSV--TKTNVPCYYFYNGYCNKGELCTFMHGPVP 1602
RHPPL+ P +S+ SV KTNVPCY+F+NG+CNKG+ C FMHGP
Sbjct: 61 RHPPLE---------MHAEGPPELSSSSVPANKTNVPCYFFFNGFCNKGDRCFFMHGP-E 110
Query: 1601 SNNVHTQKYSNARPNSDGPPVEKKGSAGSDTGSAPGAKSFRTGNQQTTRRPVM-RKESEL 1425
+N+ + S + + P++ K S G+DT SAP +T + V K
Sbjct: 111 ANSFTGKSGSTSSAIKENIPLDSKISGGNDTVSAP--TEVNANPSETAAKAVKDLKLQPY 168
Query: 1424 ENLQ-PSPSKVAKRSASPCTPRSIYEDAA--------ADGSISPVAAAGSVPRSPH---- 1284
E+ Q P+P K RS SP S E+A S + + +SP
Sbjct: 169 EDFQFPAPEKTVMRSPSPQIAVSQSEEAVILNPSFLLKVNSFTESRSLAYTTQSPEEEMD 228
Query: 1283 ---------ASSPGFDVLVDNGSDELVYEDDYNYVVDHDGDSGEP--VADEYDFKGRTID 1137
SSPGFDVLVD+ S+ L YEDD Y++ D + +P YDF+
Sbjct: 229 DHVEPEERWESSPGFDVLVDDKSENLDYEDDQEYLLPLDMEQRDPNNCFLGYDFENLVEY 288
Query: 1136 DPEYTGSAIFYEKERHEYDYHFGAQDSLXXXXXXXXXXXXXXXXXXXXXXXXXXXRGQ-- 963
D Y + E DY G D+ Q
Sbjct: 289 DHAYHDA---------EDDYGSGKYDNTDFADNVHIFDDVGNDSGLSRNSVTDSLLSQKR 339
Query: 962 -------AYNGLHSVDLRDRLKRRRMTDDR-----SHNAYSGXXXXXXXXXXXXXXXRY- 822
+ N VDLRDRL + R S YS +
Sbjct: 340 KLVAMELSINDQRIVDLRDRLGKDRAIHGHTVIRSSRRHYSSHLLGHGQGRPGSNQRPHG 399
Query: 821 ----QVERHIRRPMELNNSRSHIGHEGRFTRSSFD--------KSRLQQKPQLSSKVSGN 678
+V+ P N S+ + G++ + R S + RL +K LSS+V
Sbjct: 400 KLVLEVKSTAIEPHRKNGSQLYGGNDHGWLRHSRSNRSRQRDKERRLARKQSLSSEVLRK 459
Query: 677 AADRKRSYAEESVVFKGPKTLAQIKDEKNR---RGSREPSESSLDGLLDDNFVAPKTLSE 507
A ++R ++ S F GPKTLAQIK+EK + G + + +F +PK LSE
Sbjct: 460 PASKERKSSQASTQFTGPKTLAQIKEEKKKAEENGDYTGKTDNSSRMATADFESPKPLSE 519
Query: 506 ILEEKRRLGS 477
IL++KRR S
Sbjct: 520 ILKDKRRPSS 529
>ref|XP_003550828.1| PREDICTED: zinc finger CCCH domain-containing protein 34-like
[Glycine max]
Length = 526
Score = 236 bits (602), Expect = 2e-59
Identities = 180/550 (32%), Positives = 251/550 (45%), Gaps = 61/550 (11%)
Frame = -2
Query: 1949 MEEDLQKRNTDCVYFLASPLTCKKGSECEYRHSEMARLNPRDCYYWLSGTCLNASCAFRH 1770
M+ED KR TDCVYFLASPLTCKKG+ECEYRH+E+ARLNPRDC+YWLSG CLN +CAFRH
Sbjct: 1 MDEDSLKRYTDCVYFLASPLTCKKGAECEYRHNEIARLNPRDCWYWLSGQCLNPTCAFRH 60
Query: 1769 PPLDGGRXXXXXXXXXXXTPNVSAVSVTKTNVPCYYFYNGYCNKGELCTFMHGPVPSNNV 1590
PPLDG P +++ KT VPCY+F+NG+CNKG+ C+F+HGP +
Sbjct: 61 PPLDG-----HTGAPVPSEPTQTSLPANKTLVPCYFFFNGFCNKGDRCSFLHGP-DDSIF 114
Query: 1589 HTQKYSNARPNSDGPPVEKKGSAGSDTG--SAPGAKSFRTGNQQTTRRPVMRKESELENL 1416
+ + N ++D +E K +G+ TG S P +S + + +++ +LE
Sbjct: 115 NIKPVKNENGSTDALNLENKAPSGNRTGVTSTPTDRSVAAPKNLSDLKHQPKEDHQLE-- 172
Query: 1415 QPSPSKVAKRSASPCTPRSIYEDAAADGSISPVAAAGSVPRSPH---------------- 1284
P V ++ S Y++AA S S + G V PH
Sbjct: 173 --LPKNVKQQGDYLELSASEYKEAAVSRSDSSIPDDGFVHNVPHLCTGQSSEEQVNSHIE 230
Query: 1283 --------ASSPGFDVLVDNGSDELVYEDDYNYVVDHDGDSGEPVADEYDFKGRTIDDPE 1128
SPGFDVLV + + L YE+D Y+ D D E + D+Y F+ ID E
Sbjct: 231 PEEWWESSPHSPGFDVLVHDEVENLGYEEDSEYLPVVDRDEQE-LNDQY-FRYEFIDPVE 288
Query: 1127 Y----TGSAIFYEKERHEYDYHFGAQDSLXXXXXXXXXXXXXXXXXXXXXXXXXXXRGQA 960
Y + I YE+E ++ Y +D + +
Sbjct: 289 YDTICPEADILYEQETYD-GYRCLDRDLIHVNGRTVHAYATDAFLDPILSRKRIRTSAEM 347
Query: 959 YNGLHSVDLRDRLKRRRMTDDRSHNAYSGXXXXXXXXXXXXXXXRYQVERHIRRPMELNN 780
++DLRD L+RRR + + ERH+R +E
Sbjct: 348 AAYDKNLDLRDHLRRRREVNGPPVTGF-------LRRQESSPLMVQNQERHLRHGIEQRP 400
Query: 779 SRS-------------------HIGHEGRFTRSSFDK---------SRLQQKPQLSSKVS 684
SR IG++ R R S + +L ++ +SSK+S
Sbjct: 401 SRRLTSQLGYSAIDSTGEVETLSIGNKRRLFRQSQAQQHRPRKNYIEKLPKRQFVSSKIS 460
Query: 683 GNAADRKRSYAEESVVFKGPKTLAQIKDE---KNRRGSREPSESSLDGLLDDNFVAPKTL 513
++R ES F GPKTLA+IK+E KN GS +S D F PK L
Sbjct: 461 RKPVFKQRGLIHESSTFSGPKTLAEIKEEKMKKNAEGSLHWKSTSTD------FQDPKPL 514
Query: 512 SEILEEKRRL 483
SEIL+ KR +
Sbjct: 515 SEILKVKRTM 524
>ref|XP_003525663.1| PREDICTED: zinc finger CCCH domain-containing protein 34-like
[Glycine max]
Length = 524
Score = 235 bits (599), Expect = 4e-59
Identities = 186/551 (33%), Positives = 252/551 (45%), Gaps = 62/551 (11%)
Frame = -2
Query: 1949 MEEDLQKRNTDCVYFLASPLTCKKGSECEYRHSEMARLNPRDCYYWLSGTCLNASCAFRH 1770
M++D KR TDCVYFLASPLTCKKG+ECEYRH+E+ARLNPRDC+YWLSG CLN +CAFRH
Sbjct: 1 MDQDSLKRYTDCVYFLASPLTCKKGAECEYRHNEIARLNPRDCWYWLSGQCLNPTCAFRH 60
Query: 1769 PPLDGGRXXXXXXXXXXXTPNVSAVSVTKTNVPCYYFYNGYCNKGELCTFMHGPVPSNNV 1590
PPLDG P +++ KT VPCY+F+NG CNKG+ C+F+HG P +++
Sbjct: 61 PPLDG-----HTGASVPSEPTQTSLPANKTMVPCYFFFNGSCNKGDRCSFLHG--PDDSI 113
Query: 1589 HTQK-YSNARPNSDGPPVEKKGSAGSDTG--SAPGAKSFRTGNQQTTRRPVMRKESELEN 1419
T K N ++D +E K S+G+ G S P +S + + +++ +LE
Sbjct: 114 FTVKPVKNDNGSTDALNLENKTSSGNRIGLVSTPTDQSVAAPKNLSDLKLQPKEDHQLE- 172
Query: 1418 LQPSPSKVAKRSASPCTPRSIYEDAAADGSISPVAAAGSVPRSPH--------------- 1284
P V ++ S Y++AA S S + G V PH
Sbjct: 173 ---IPKDVKQQGYYLELSASEYKEAAVSRSDSSIPDDGFVHNVPHLCTEQSSEEQVNSHI 229
Query: 1283 ---------ASSPGFDVLVDNGSDELVYEDDYNYVVDHDGDSGEPVADE---YDFKGRTI 1140
SPGFDVLV + D L YE+D YV D D E + D+ Y+FK
Sbjct: 230 EPEERWESSPHSPGFDVLVHDEVDNLGYEEDSEYVTVGDRDEQE-LDDQYFGYEFKDSVE 288
Query: 1139 DDPEYTGSAIFYEKERHEYDYHFGAQDSLXXXXXXXXXXXXXXXXXXXXXXXXXXXRGQA 960
D + I YE+E ++ Y F + + +
Sbjct: 289 YDTICPEADILYEQETYD-GYRFLDRGLIHANGRTIHAYPRDVFLDPRLSRKRIRMSAEM 347
Query: 959 YNGLHSVDLRDRLKRRRMTDDRSHNAYSGXXXXXXXXXXXXXXXRYQVERHIRRPMELNN 780
++DLRD L+RRR G + ERH R +E
Sbjct: 348 AAYDKNLDLRDHLRRRR--------EIKGPPVSNFLRRESSPLMIRKQERHQRHGIEQRP 399
Query: 779 SR-----------SHIGHEGRFTRSSFDKSRL-------QQKPQ------------LSSK 690
R IG G T S +K RL Q KP+ LSSK
Sbjct: 400 IRRLTSQLGYSAIDSIGEVG--TLSVANKHRLFRHSQAQQHKPRKHYREKLPKRQFLSSK 457
Query: 689 VSGNAADRKRSYAEESVVFKGPKTLAQIKDEKNRR--GSREPSESSLDGLLDDNFVAPKT 516
+S A ++R + E F GPKTLA+IK+EK ++ GS +S D F PK
Sbjct: 458 ISRKPAFKQRGFIHEFSAFSGPKTLAEIKEEKMKKAEGSLHWKSTSTD------FQDPKP 511
Query: 515 LSEILEEKRRL 483
LSEIL++KR +
Sbjct: 512 LSEILKDKRTM 522