BLASTX nr result
ID: Lithospermum22_contig00018934
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00018934
(836 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002515245.1| ATP-dependent RNA helicase, putative [Ricinu... 394 e-107
emb|CBI36976.3| unnamed protein product [Vitis vinifera] 392 e-107
ref|XP_002278247.1| PREDICTED: probable pre-mRNA-splicing factor... 392 e-107
ref|XP_003518717.1| PREDICTED: probable pre-mRNA-splicing factor... 392 e-107
ref|XP_003554560.1| PREDICTED: probable pre-mRNA-splicing factor... 392 e-107
>ref|XP_002515245.1| ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223545725|gb|EEF47229.1| ATP-dependent RNA helicase,
putative [Ricinus communis]
Length = 731
Score = 394 bits (1012), Expect = e-107
Identities = 182/203 (89%), Positives = 192/203 (94%)
Frame = -2
Query: 835 VPNCFIRPREAQKAADEAKARFSHIDGDHLTLLNVYHAYKQNQEDPSWCYENFVNHRALK 656
VPNCF+RPREAQKAADEAKARF HIDGDHLTLLNVYHAYKQN EDPSWCYENF+NHRALK
Sbjct: 529 VPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYENFINHRALK 588
Query: 655 SADNVRQQLVRIMVRFGLKLCSTDFNSRDYYINIRKAMLAGYFMQVAHLERTGHYLTVKD 476
+ADNVRQQLVRIM RF LKLCSTDFNSRDYY+NIRKAMLAGYFMQVAHLERTGHYLTVKD
Sbjct: 589 AADNVRQQLVRIMTRFNLKLCSTDFNSRDYYVNIRKAMLAGYFMQVAHLERTGHYLTVKD 648
Query: 475 NQVVHLHPSNCLDHKPEWVIYNEYVLTTRNFIRMVTDVRGEWLIDIAPHYYDLTNFPSCE 296
NQVVHLHPSNCLDHKPEWVIY+EYVLT+RNFIR VTD+RGEWL+DIAPHYYDL NFP+CE
Sbjct: 649 NQVVHLHPSNCLDHKPEWVIYSEYVLTSRNFIRTVTDIRGEWLVDIAPHYYDLDNFPNCE 708
Query: 295 AKRVLEKLYKKREREGSSNKK*K 227
AKRVLEKLYKKRERE +K K
Sbjct: 709 AKRVLEKLYKKREREKEESKNRK 731
>emb|CBI36976.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 392 bits (1008), Expect = e-107
Identities = 185/203 (91%), Positives = 192/203 (94%), Gaps = 2/203 (0%)
Frame = -2
Query: 835 VPNCFIRPREAQKAADEAKARFSHIDGDHLTLLNVYHAYKQNQEDPSWCYENFVNHRALK 656
VPNCF+RPREAQKAADEAKARF HIDGDHLTLLNVYHAYKQN EDPSWCYENFVN RALK
Sbjct: 485 VPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYENFVNQRALK 544
Query: 655 SADNVRQQLVRIMVRFGLKLCSTDFNSRDYYINIRKAMLAGYFMQVAHLERTGHYLTVKD 476
+ADNVRQQLVRIM RF LKLCSTDFNSRDYYINIRKAMLAGYFMQVAHLERTGHYLTVKD
Sbjct: 545 AADNVRQQLVRIMARFNLKLCSTDFNSRDYYINIRKAMLAGYFMQVAHLERTGHYLTVKD 604
Query: 475 NQVVHLHPSNCLDHKPEWVIYNEYVLTTRNFIRMVTDVRGEWLIDIAPHYYDLTNFPSCE 296
NQVVHLHPSNCLDHKPEWVIYNEYVLT+RNFIR VTDVRGEWL+D+APHYYDL NFP+CE
Sbjct: 605 NQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLVDVAPHYYDLANFPNCE 664
Query: 295 AKRVLEKLYKKRE--REGSSNKK 233
AKRVLEKLYKKRE RE S N+K
Sbjct: 665 AKRVLEKLYKKREKDREESRNRK 687
>ref|XP_002278247.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase [Vitis vinifera] gi|147787427|emb|CAN64445.1|
hypothetical protein VITISV_036050 [Vitis vinifera]
Length = 728
Score = 392 bits (1008), Expect = e-107
Identities = 185/203 (91%), Positives = 192/203 (94%), Gaps = 2/203 (0%)
Frame = -2
Query: 835 VPNCFIRPREAQKAADEAKARFSHIDGDHLTLLNVYHAYKQNQEDPSWCYENFVNHRALK 656
VPNCF+RPREAQKAADEAKARF HIDGDHLTLLNVYHAYKQN EDPSWCYENFVN RALK
Sbjct: 526 VPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYENFVNQRALK 585
Query: 655 SADNVRQQLVRIMVRFGLKLCSTDFNSRDYYINIRKAMLAGYFMQVAHLERTGHYLTVKD 476
+ADNVRQQLVRIM RF LKLCSTDFNSRDYYINIRKAMLAGYFMQVAHLERTGHYLTVKD
Sbjct: 586 AADNVRQQLVRIMARFNLKLCSTDFNSRDYYINIRKAMLAGYFMQVAHLERTGHYLTVKD 645
Query: 475 NQVVHLHPSNCLDHKPEWVIYNEYVLTTRNFIRMVTDVRGEWLIDIAPHYYDLTNFPSCE 296
NQVVHLHPSNCLDHKPEWVIYNEYVLT+RNFIR VTDVRGEWL+D+APHYYDL NFP+CE
Sbjct: 646 NQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLVDVAPHYYDLANFPNCE 705
Query: 295 AKRVLEKLYKKRE--REGSSNKK 233
AKRVLEKLYKKRE RE S N+K
Sbjct: 706 AKRVLEKLYKKREKDREESRNRK 728
>ref|XP_003518717.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like [Glycine max]
Length = 722
Score = 392 bits (1007), Expect = e-107
Identities = 179/195 (91%), Positives = 189/195 (96%)
Frame = -2
Query: 835 VPNCFIRPREAQKAADEAKARFSHIDGDHLTLLNVYHAYKQNQEDPSWCYENFVNHRALK 656
VPNCF+RPREAQKAADEAKARF HIDGDHLTLLNVYHAYKQN EDPSWCY+NFVNHRALK
Sbjct: 520 VPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALK 579
Query: 655 SADNVRQQLVRIMVRFGLKLCSTDFNSRDYYINIRKAMLAGYFMQVAHLERTGHYLTVKD 476
SADNVRQQLVRIM RF LKLCSTDFNSRDYY+NIRKAMLAGYFMQVAHLERTGHYLTVKD
Sbjct: 580 SADNVRQQLVRIMARFNLKLCSTDFNSRDYYVNIRKAMLAGYFMQVAHLERTGHYLTVKD 639
Query: 475 NQVVHLHPSNCLDHKPEWVIYNEYVLTTRNFIRMVTDVRGEWLIDIAPHYYDLTNFPSCE 296
NQVVHLHPSNCLDHKPEWVIYNEYVLT+RNFIR VTD+RGEWL+D+APHYYDL+NFP CE
Sbjct: 640 NQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDVAPHYYDLSNFPQCE 699
Query: 295 AKRVLEKLYKKRERE 251
AKRVLE+LYKKRE+E
Sbjct: 700 AKRVLERLYKKREKE 714
>ref|XP_003554560.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like isoform 2 [Glycine max]
Length = 713
Score = 392 bits (1006), Expect = e-107
Identities = 180/195 (92%), Positives = 189/195 (96%)
Frame = -2
Query: 835 VPNCFIRPREAQKAADEAKARFSHIDGDHLTLLNVYHAYKQNQEDPSWCYENFVNHRALK 656
VPNCF+RPREAQKAADEAKARF HIDGDHLTLLNVYHAYKQN EDPSWCY+NFVNHRALK
Sbjct: 511 VPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALK 570
Query: 655 SADNVRQQLVRIMVRFGLKLCSTDFNSRDYYINIRKAMLAGYFMQVAHLERTGHYLTVKD 476
SADNVRQQLVRIM RF LKLCSTDFNSRDYY+NIRKAMLAGYFMQVAHLERTGHYLTVKD
Sbjct: 571 SADNVRQQLVRIMSRFNLKLCSTDFNSRDYYVNIRKAMLAGYFMQVAHLERTGHYLTVKD 630
Query: 475 NQVVHLHPSNCLDHKPEWVIYNEYVLTTRNFIRMVTDVRGEWLIDIAPHYYDLTNFPSCE 296
NQVVHLHPSNCLDHKPEWVIYNEYVLT+RNFIR VTD+RGEWL+DIAPHYYDL+NFP CE
Sbjct: 631 NQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDIAPHYYDLSNFPQCE 690
Query: 295 AKRVLEKLYKKRERE 251
AKRVLE+LYKKRE+E
Sbjct: 691 AKRVLERLYKKREKE 705