BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00018932
         (1685 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...    89   1e-19
gb|AAD15377.1| putative non-LTR retroelement reverse transcripta...    86   2e-19
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...    82   2e-18
gb|AAC28197.1| contains similarity to reverse transcriptases [Ar...    82   4e-18
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...    77   7e-17

>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 89.0 bits (219), Expect(3) = 1e-19
 Identities = 50/115 (43%), Positives = 64/115 (55%)
 Frame = -3

Query: 348 FTMEEVKMSLFSMHGTKSRGPDGMSAIFFQHNWETLGDIFEQHGSKLGE*RGLLNKFNFT 169
           F+ EE+ ++L  MH  K+ GPDGM AIF+Q  W  +GD   Q  S +       +  N T
Sbjct: 432 FSKEELYVALSQMHPCKAPGPDGMHAIFYQKFWHIIGDDVTQFVSSILHGSISPSCINHT 491

Query: 168 LISLIPKVNPPVNMVQFRPIALCNXXXXXXXXVFATRLKNILSSVISEIQSAFVP 4
            I+LIPKV  P    +FRPIALCN            RLK+ L  ++SE QSAFVP
Sbjct: 492 NIALIPKVKNPTTPAEFRPIALCNVVYKLVSKALVIRLKDFLPRLVSENQSAFVP 546



 Score = 28.5 bits (62), Expect(3) = 1e-19
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -2

Query: 631 KIDRM*KANDIYWTQRAKA**QLKGDRNTAYFH 533
           K+D +    +  W  R++A     GDRNT YFH
Sbjct: 326 KLDELHAKQEARWYLRSRAMEVRDGDRNTKYFH 358



 Score = 26.9 bits (58), Expect(3) = 1e-19
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = -1

Query: 524 SYKGKQNTITSL*DENGTQLHEISGIHHLVVSFYERLFASQN 399
           S + K+N +  L D +GT   E+  I  +   ++  +F S N
Sbjct: 362 SQRKKRNFVKGLFDASGTWCEEVDDIECVFTDYFTSIFTSTN 403


>gb|AAD15377.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1044

 Score = 86.3 bits (212), Expect(3) = 2e-19
 Identities = 49/112 (43%), Positives = 61/112 (54%)
 Frame = -3

Query: 339 EEVKMSLFSMHGTKSRGPDGMSAIFFQHNWETLGDIFEQHGSKLGE*RGLLNKFNFTLIS 160
           EE+K + FS+H  K+ GPDG SA FFQ NW T+G               L    N T I+
Sbjct: 257 EEIKSACFSIHADKAPGPDGFSASFFQSNWMTVGPNIVLEIQSFFSSSTLQPTINKTHIT 316

Query: 159 LIPKVNPPVNMVQFRPIALCNXXXXXXXXVFATRLKNILSSVISEIQSAFVP 4
           LIPK+     MV +RPIALC         + + RL+ IL  +ISE QSAFVP
Sbjct: 317 LIPKIQSLKRMVDYRPIALCTVFYKIISKLLSRRLQPILQEIISENQSAFVP 368



 Score = 32.7 bits (73), Expect(3) = 2e-19
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = -2

Query: 613 KANDIYWTQRAKA**QLKGDRNTAYFHALS 524
           KA + YW QR++      GD+N+ YFHA++
Sbjct: 164 KAEEEYWKQRSRQLWLALGDKNSGYFHAIT 193



 Score = 24.6 bits (52), Expect(3) = 2e-19
 Identities = 9/37 (24%), Positives = 23/37 (62%)
 Frame = -1

Query: 506 NTITSL*DENGTQLHEISGIHHLVVSFYERLFASQNG 396
           N  + +  E+G   +E +GI +++  ++++LF++  G
Sbjct: 200 NKFSVIEKEDGVPEYEEAGILNVISEYFQKLFSANEG 236


>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score = 82.4 bits (202), Expect(3) = 2e-18
 Identities = 49/112 (43%), Positives = 60/112 (53%)
 Frame = -3

Query: 339 EEVKMSLFSMHGTKSRGPDGMSAIFFQHNWETLGDIFEQHGSKLGE*RGLLNKFNFTLIS 160
           +EVK +LF+MH  K+ G DG+ A+FFQ  W  LG              G L   N T I 
Sbjct: 434 DEVKEALFAMHPNKAPGIDGLHALFFQKFWHILGSDVISFVQSWWRGMGDLGVVNKTCIV 493

Query: 159 LIPKVNPPVNMVQFRPIALCNXXXXXXXXVFATRLKNILSSVISEIQSAFVP 4
           LIPK + P +M  FRPI+LC           A RLK IL ++IS  QSAFVP
Sbjct: 494 LIPKCDHPQSMKDFRPISLCTVLYKILSKTLANRLKVILPAIISPNQSAFVP 545



 Score = 30.4 bits (67), Expect(3) = 2e-18
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -2

Query: 628 IDRM*KANDIYWTQRAKA**QLKGDRNTAYFH 533
           +D + +  + YW  RA+A     GD+NT YFH
Sbjct: 328 LDEIHRLEESYWHARARANEIRDGDKNTKYFH 359



 Score = 26.9 bits (58), Expect(3) = 2e-18
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = -1

Query: 524 SYKGKQNTITSL*DENGTQLHEISGIHHLVVSFYERLFASQN 399
           S + ++NTI  L DENG        I  +V  ++E LFA+ +
Sbjct: 363 SQRKRRNTINELLDENGVWKKGREEICGVVQHYFEGLFATDS 404


>gb|AAC28197.1| contains similarity to reverse transcriptases [Arabidopsis
           thaliana] gi|7267156|emb|CAB77868.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 1077

 Score = 81.6 bits (200), Expect(3) = 4e-18
 Identities = 47/114 (41%), Positives = 61/114 (53%)
 Frame = -3

Query: 345 TMEEVKMSLFSMHGTKSRGPDGMSAIFFQHNWETLGDIFEQHGSKLGE*RGLLNKFNFTL 166
           T+ E+K +  S+H  K+ G DG SA FFQ NW T+ +              L  K N T 
Sbjct: 405 TVAEIKQACLSIHPDKAPGRDGFSASFFQSNWSTVSEEITAEVQAFFISEILPQKINHTH 464

Query: 165 ISLIPKVNPPVNMVQFRPIALCNXXXXXXXXVFATRLKNILSSVISEIQSAFVP 4
           + LIPK+  P  +  +RPIALC+        + A RL+ IL S ISE QSAFVP
Sbjct: 465 VRLIPKIPAPQKVSDYRPIALCSVYYKIIAKLLAKRLQPILHSCISENQSAFVP 518



 Score = 31.6 bits (70), Expect(3) = 4e-18
 Identities = 15/56 (26%), Positives = 29/56 (51%)
 Frame = -1

Query: 545 CIFPCLISYKGKQNTITSL*DENGTQLHEISGIHHLVVSFYERLFASQNGGLTPIL 378
           C F    + +   NTI+ + +  GT ++E S I   +  +++ +F SQ G  T ++
Sbjct: 329 CFFHAATNSRRAINTISVIENSAGTSVYEDSEIIETISDYFQDIFTSQEGDRTSVV 384



 Score = 25.8 bits (55), Expect(3) = 4e-18
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -2

Query: 613 KANDIYWTQRAKA**QLKGDRNTAYFHA 530
           +  + +W QR++      GD+N+ +FHA
Sbjct: 306 RKEETFWKQRSRNLWLALGDKNSCFFHA 333


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score = 77.0 bits (188), Expect(2) = 7e-17
 Identities = 49/126 (38%), Positives = 65/126 (51%)
 Frame = -3

Query: 381  SGTFTDCHGEFFTMEEVKMSLFSMHGTKSRGPDGMSAIFFQHNWETLGDIFEQHGSKLGE 202
            SG   +     FT EEVK +L ++   K+ GPDGM A F++  W+ +G+       ++  
Sbjct: 673  SGAMNESLRAEFTREEVKEALDAIGDLKAPGPDGMPAGFYKACWDVVGEKVTDEVLEVLR 732

Query: 201  *RGLLNKFNFTLISLIPKVNPPVNMVQFRPIALCNXXXXXXXXVFATRLKNILSSVISEI 22
               +   +N   I LIPKV  P  +   RPI+LCN        V A RLK IL  VIS  
Sbjct: 733  GGAIPEGWNDITIVLIPKVKKPELIKDLRPISLCNVCYKLVSKVLANRLKKILPDVISPA 792

Query: 21   QSAFVP 4
            QSAFVP
Sbjct: 793  QSAFVP 798



 Score = 38.1 bits (87), Expect(2) = 7e-17
 Identities = 18/53 (33%), Positives = 30/53 (56%)
 Frame = -2

Query: 631 KIDRM*KANDIYWTQRAKA**QLKGDRNTAYFHALSVTKANKTPLHLCRMRMG 473
           +++++ +  DIYW QRA      KGDRNT++FHA    +  +  ++  R   G
Sbjct: 580 RLEKLEQQVDIYWKQRAHTNWLNKGDRNTSFFHASCSERRRRNRINKLRREDG 632