BLASTX nr result
ID: Lithospermum22_contig00018858
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00018858
(478 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002267320.1| PREDICTED: zinc finger CCCH domain-containin... 189 2e-46
emb|CAN74119.1| hypothetical protein VITISV_002050 [Vitis vinifera] 189 2e-46
ref|XP_003536245.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ... 171 7e-41
ref|XP_003518958.1| PREDICTED: zinc finger CCCH domain-containin... 169 2e-40
ref|XP_003518955.1| PREDICTED: zinc finger CCCH domain-containin... 168 5e-40
>ref|XP_002267320.1| PREDICTED: zinc finger CCCH domain-containing protein 32 isoform 1
[Vitis vinifera] gi|296086618|emb|CBI32253.3| unnamed
protein product [Vitis vinifera]
Length = 475
Score = 189 bits (481), Expect = 2e-46
Identities = 93/161 (57%), Positives = 111/161 (68%), Gaps = 5/161 (3%)
Frame = +2
Query: 2 HHPQPAGMSSPAAARPFYPAMQNLPSPSAEQHGGPSTSYRVARPPALSGSYVPG-YSPML 178
HHPQPAG S PA+A FYP +Q+ P+ Q+GG STS+RV RPP L GSYV G Y P+L
Sbjct: 163 HHPQPAGTSLPASAPTFYPTVQSPSVPTPTQYGGTSTSWRVPRPPVLPGSYVQGPYGPVL 222
Query: 179 YHPGVVPFPNWSSYPGP----LTPGAQAAAREASSYGMSQLATSASLPGTYPPFMSYAGH 346
+ PGVVP P WS Y P L+PGAQ S YG++QL ++ +L G Y S AG
Sbjct: 223 FPPGVVPIPGWSPYSTPVSPVLSPGAQPTVGAGSVYGVTQLPSTHTLAGPYASLPSSAGP 282
Query: 347 SGSTQKEQPYPIRVGQRECQYYMKTGDCKFGSSCRYHHPPE 469
S S QKEQ +P R GQ+ECQYY++TGDCKFGSSCRYHHP E
Sbjct: 283 SSSNQKEQVFPERPGQQECQYYLRTGDCKFGSSCRYHHPRE 323
Score = 58.5 bits (140), Expect = 5e-07
Identities = 19/30 (63%), Positives = 27/30 (90%)
Frame = +2
Query: 374 YPIRVGQRECQYYMKTGDCKFGSSCRYHHP 463
YP+R+G++EC YY+KTG CKFG +C++HHP
Sbjct: 136 YPLRLGEKECSYYLKTGQCKFGITCKFHHP 165
Score = 57.0 bits (136), Expect = 2e-06
Identities = 20/30 (66%), Positives = 26/30 (86%)
Frame = +2
Query: 374 YPIRVGQRECQYYMKTGDCKFGSSCRYHHP 463
YP R+G+ CQ+Y+KTG CKFG+SCR+HHP
Sbjct: 90 YPERIGEPACQFYLKTGTCKFGASCRFHHP 119
>emb|CAN74119.1| hypothetical protein VITISV_002050 [Vitis vinifera]
Length = 1388
Score = 189 bits (481), Expect = 2e-46
Identities = 93/161 (57%), Positives = 111/161 (68%), Gaps = 5/161 (3%)
Frame = +2
Query: 2 HHPQPAGMSSPAAARPFYPAMQNLPSPSAEQHGGPSTSYRVARPPALSGSYVPG-YSPML 178
HHPQPAG S PA+A FYP +Q+ P+ Q+GG STS+RV RPP L GSYV G Y P+L
Sbjct: 201 HHPQPAGTSLPASAPTFYPTVQSPSVPTPTQYGGTSTSWRVPRPPVLPGSYVQGPYGPVL 260
Query: 179 YHPGVVPFPNWSSYPGP----LTPGAQAAAREASSYGMSQLATSASLPGTYPPFMSYAGH 346
+ PGVVP P WS Y P L+PGAQ S YG++QL ++ +L G Y S AG
Sbjct: 261 FPPGVVPIPGWSPYSTPVSPVLSPGAQPTVGAGSVYGVTQLPSTHTLAGPYASLPSSAGP 320
Query: 347 SGSTQKEQPYPIRVGQRECQYYMKTGDCKFGSSCRYHHPPE 469
S S QKEQ +P R GQ+ECQYY++TGDCKFGSSCRYHHP E
Sbjct: 321 SSSNQKEQVFPERPGQQECQYYLRTGDCKFGSSCRYHHPRE 361
>ref|XP_003536245.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 32-like [Glycine max]
Length = 494
Score = 171 bits (432), Expect = 7e-41
Identities = 87/160 (54%), Positives = 103/160 (64%), Gaps = 6/160 (3%)
Frame = +2
Query: 2 HHPQPAGMSSPAAARPFYPAMQNLPSPSAEQHGGPSTSYRVARPPALSGSYVPG-YSPML 178
HHPQPAG S P +A FY +Q+ P EQ+GG STS RVARPP L GSYV G Y P+L
Sbjct: 163 HHPQPAGTSLPTSAPQFYQQVQSPTVPLPEQYGGASTSLRVARPPVLPGSYVQGAYGPVL 222
Query: 179 YHPGVVPFPNWSSYPGP----LTPGAQAAAREASSYGMSQLATSAS-LPGTYPPFMSYAG 343
PGVV FP WS Y P L+PGAQ S YG++QL++ S Y P S G
Sbjct: 223 LSPGVVQFPGWSHYSAPVSPVLSPGAQPTVGATSLYGVTQLSSPTSAFARPYTPLSSTTG 282
Query: 344 HSGSTQKEQPYPIRVGQRECQYYMKTGDCKFGSSCRYHHP 463
SGS K+Q +P R G+ ECQYY++TGDCKFG +CRYHHP
Sbjct: 283 PSGSNLKDQFFPERPGEPECQYYLRTGDCKFGLACRYHHP 322
Score = 58.5 bits (140), Expect = 5e-07
Identities = 20/30 (66%), Positives = 26/30 (86%)
Frame = +2
Query: 374 YPIRVGQRECQYYMKTGDCKFGSSCRYHHP 463
YP+R G++EC YY+KTG CKFG SC++HHP
Sbjct: 136 YPLRPGEKECSYYLKTGQCKFGISCKFHHP 165
Score = 57.8 bits (138), Expect = 9e-07
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = +2
Query: 374 YPIRVGQRECQYYMKTGDCKFGSSCRYHHP 463
YP RVG+ CQYY+KTG CKFG+SC++HHP
Sbjct: 90 YPERVGEPPCQYYLKTGTCKFGASCKFHHP 119
>ref|XP_003518958.1| PREDICTED: zinc finger CCCH domain-containing protein 32-like
[Glycine max]
Length = 339
Score = 169 bits (429), Expect = 2e-40
Identities = 86/160 (53%), Positives = 104/160 (65%), Gaps = 6/160 (3%)
Frame = +2
Query: 2 HHPQPAGMSSPAAARPFYPAMQNLPSPSAEQHGGPSTSYRVARPPALSGSYVPG-YSPML 178
HHPQPAG S P +A FY +Q+ P EQ+GG STS RVARPP L GSYV G Y P+L
Sbjct: 160 HHPQPAGTSLPTSAPQFYQQVQSPTVPLPEQYGGASTSLRVARPPVLPGSYVQGAYGPVL 219
Query: 179 YHPGVVPFPNWSSYPGP----LTPGAQAAAREASSYGMSQLATSAS-LPGTYPPFMSYAG 343
PGVV FP WS Y P L+PG Q A S YG++QL++ S Y P S G
Sbjct: 220 LSPGVVQFPGWSHYSAPVSPVLSPGTQPAVGATSLYGVTQLSSPTSAFARPYTPLSSTTG 279
Query: 344 HSGSTQKEQPYPIRVGQRECQYYMKTGDCKFGSSCRYHHP 463
SGS+ K++ +P R G+ ECQYY++TGDCKFG +CRYHHP
Sbjct: 280 PSGSSLKDRFFPERPGEPECQYYLRTGDCKFGLACRYHHP 319
Score = 59.7 bits (143), Expect = 2e-07
Identities = 20/30 (66%), Positives = 27/30 (90%)
Frame = +2
Query: 374 YPIRVGQRECQYYMKTGDCKFGSSCRYHHP 463
YP+R+G++EC YY+KTG CKFG SC++HHP
Sbjct: 133 YPLRLGEKECSYYLKTGQCKFGISCKFHHP 162
Score = 57.8 bits (138), Expect = 9e-07
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = +2
Query: 374 YPIRVGQRECQYYMKTGDCKFGSSCRYHHP 463
YP RVG+ CQYY+KTG CKFG+SC++HHP
Sbjct: 87 YPERVGEPPCQYYLKTGTCKFGASCKFHHP 116
>ref|XP_003518955.1| PREDICTED: zinc finger CCCH domain-containing protein 32-like
[Glycine max]
Length = 471
Score = 168 bits (425), Expect = 5e-40
Identities = 87/160 (54%), Positives = 103/160 (64%), Gaps = 6/160 (3%)
Frame = +2
Query: 2 HHPQPAGMSSPAAARPFYPAMQNLPSPSAEQHGGPSTSYRVARPPALSGSYVPG-YSPML 178
HHPQPAG S PA+A FY +Q+ P EQ+GG S+S RVARPP L GSYV G Y P+L
Sbjct: 163 HHPQPAGTSLPASAPQFYQQVQSPTVPLPEQYGGASSSLRVARPPILPGSYVQGAYGPVL 222
Query: 179 YHPGVVPFPNWSSYPGPLTP----GAQAAAREASSYGMSQLATSAS-LPGTYPPFMSYAG 343
PGVV FP WS Y P++P GAQ A S YG++QL++ S Y P S
Sbjct: 223 LSPGVVQFPGWSHYSAPVSPVPSPGAQPAVGATSLYGVTQLSSPTSAFARPYTPLPSTTD 282
Query: 344 HSGSTQKEQPYPIRVGQRECQYYMKTGDCKFGSSCRYHHP 463
S S KEQ YP R G+ ECQYY++TGDCKFG +CRYHHP
Sbjct: 283 PSRSNPKEQLYPERPGEPECQYYLRTGDCKFGLACRYHHP 322
Score = 62.0 bits (149), Expect = 5e-08
Identities = 40/121 (33%), Positives = 51/121 (42%), Gaps = 20/121 (16%)
Frame = +2
Query: 161 GYSPMLYHPGVVPFPNWSSYPGPLTPGAQAAAREASSY----GMSQLATSASLPG-TYPP 325
G SP P V P WSS PG A E+ + G + +P Y
Sbjct: 5 GRSPARNGPNPVNQPEWSS------PGTDTALEESMWHLTLGGGESYPERSGVPNCVYYM 58
Query: 326 FMSYAGHSGSTQKEQP---------------YPIRVGQRECQYYMKTGDCKFGSSCRYHH 460
G+ G + P YP RVG+ CQYY+KTG CKFG+SC++HH
Sbjct: 59 RTGVCGYGGRCRYNHPRDRAAVAAAVRATGDYPERVGEPPCQYYLKTGTCKFGASCKFHH 118
Query: 461 P 463
P
Sbjct: 119 P 119
Score = 58.5 bits (140), Expect = 5e-07
Identities = 20/30 (66%), Positives = 26/30 (86%)
Frame = +2
Query: 374 YPIRVGQRECQYYMKTGDCKFGSSCRYHHP 463
YP+R G++EC YY+KTG CKFG SC++HHP
Sbjct: 136 YPLRPGEKECSYYLKTGQCKFGISCKFHHP 165