BLASTX nr result

ID: Lithospermum22_contig00018806 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00018806
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_565391.1| ubiquitin-conjugating enzyme E2 29 [Arabidopsis...   115   3e-24
ref|XP_002884013.1| ubiquitin-conjugating enzyme 27 [Arabidopsis...   114   6e-24
ref|XP_002438462.1| hypothetical protein SORBIDRAFT_10g020030 [S...   114   8e-24
gb|AAF24583.1|AC007764_25 F22C12.2 [Arabidopsis thaliana]             114   1e-23
ref|NP_564828.1| ubiquitin-conjugating enzyme E2 28 [Arabidopsis...   114   1e-23

>ref|NP_565391.1| ubiquitin-conjugating enzyme E2 29 [Arabidopsis thaliana]
           gi|75337377|sp|Q9SLE4.1|UBC29_ARATH RecName:
           Full=Ubiquitin-conjugating enzyme E2 29; AltName:
           Full=Ubiquitin carrier protein 29
           gi|4581117|gb|AAD24607.1| E2, ubiquitin-conjugating
           enzyme, putative [Arabidopsis thaliana]
           gi|17380832|gb|AAL36228.1| putative E2,
           ubiquitin-conjugating enzyme [Arabidopsis thaliana]
           gi|20259629|gb|AAM14171.1| putative
           ubiquitin-conjugating enzyme E2 [Arabidopsis thaliana]
           gi|21555345|gb|AAM63837.1| E2, ubiquitin-conjugating
           enzyme, putative [Arabidopsis thaliana]
           gi|66354466|gb|AAY44868.1| ubiquitinating enzyme
           [Arabidopsis thaliana] gi|330251439|gb|AEC06533.1|
           ubiquitin-conjugating enzyme E2 29 [Arabidopsis
           thaliana]
          Length = 148

 Score =  115 bits (289), Expect = 3e-24
 Identities = 53/59 (89%), Positives = 56/59 (94%)
 Frame = -3

Query: 376 KDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKADRLKYESMARSWTQKYATF 200
           KDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAH+YK D+ KYE+MARSWTQKYA F
Sbjct: 90  KDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHIYKTDKTKYEAMARSWTQKYALF 148


>ref|XP_002884013.1| ubiquitin-conjugating enzyme 27 [Arabidopsis lyrata subsp. lyrata]
           gi|297329853|gb|EFH60272.1| ubiquitin-conjugating enzyme
           27 [Arabidopsis lyrata subsp. lyrata]
          Length = 148

 Score =  114 bits (286), Expect = 6e-24
 Identities = 52/59 (88%), Positives = 56/59 (94%)
 Frame = -3

Query: 376 KDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKADRLKYESMARSWTQKYATF 200
           KDQWSPALTISKVLLSICSLLTDPNPDDPLVP+IAH+YK D+ KYE+MARSWTQKYA F
Sbjct: 90  KDQWSPALTISKVLLSICSLLTDPNPDDPLVPDIAHIYKTDKAKYEAMARSWTQKYALF 148


>ref|XP_002438462.1| hypothetical protein SORBIDRAFT_10g020030 [Sorghum bicolor]
           gi|241916685|gb|EER89829.1| hypothetical protein
           SORBIDRAFT_10g020030 [Sorghum bicolor]
          Length = 148

 Score =  114 bits (285), Expect = 8e-24
 Identities = 52/57 (91%), Positives = 55/57 (96%)
 Frame = -3

Query: 376 KDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKADRLKYESMARSWTQKYA 206
           K+QWSPALT+SKVLLSICSLLTDPNPDDPLVPEIAHMYK DR+KYES ARSWTQKYA
Sbjct: 90  KEQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRVKYESTARSWTQKYA 146


>gb|AAF24583.1|AC007764_25 F22C12.2 [Arabidopsis thaliana]
          Length = 146

 Score =  114 bits (284), Expect = 1e-23
 Identities = 53/57 (92%), Positives = 54/57 (94%)
 Frame = -3

Query: 376 KDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKADRLKYESMARSWTQKYA 206
           K+QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK DR KYES ARSWTQKYA
Sbjct: 88  KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTARSWTQKYA 144


>ref|NP_564828.1| ubiquitin-conjugating enzyme E2 28 [Arabidopsis thaliana]
           gi|79320672|ref|NP_001031228.1| ubiquitin-conjugating
           enzyme E2 28 [Arabidopsis thaliana]
           gi|297840061|ref|XP_002887912.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|75332178|sp|Q94F47.1|UBC28_ARATH RecName:
           Full=Ubiquitin-conjugating enzyme E2 28; AltName:
           Full=Ubiquitin carrier protein 28
           gi|14326529|gb|AAK60309.1|AF385718_1 At1g64230/F22C12_17
           [Arabidopsis thaliana]
           gi|20136192|gb|AAM11574.1|AF480945_1 ubiquitin
           conjugating enzyme UBC9A [Arabidopsis thaliana]
           gi|22137310|gb|AAM91500.1| At1g64230/F22C12_17
           [Arabidopsis thaliana] gi|66354464|gb|AAY44867.1|
           ubiquitinating enzyme [Arabidopsis thaliana]
           gi|297333753|gb|EFH64171.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|332196091|gb|AEE34212.1| ubiquitin-conjugating enzyme
           E2 28 [Arabidopsis thaliana] gi|332196092|gb|AEE34213.1|
           ubiquitin-conjugating enzyme E2 28 [Arabidopsis
           thaliana]
          Length = 148

 Score =  114 bits (284), Expect = 1e-23
 Identities = 53/57 (92%), Positives = 54/57 (94%)
 Frame = -3

Query: 376 KDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKADRLKYESMARSWTQKYA 206
           K+QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK DR KYES ARSWTQKYA
Sbjct: 90  KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTARSWTQKYA 146


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