BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00018800
         (573 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAV92930.1| putative transcription regulator CPL1 [Solanum ly...   149   2e-34
ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal doma...   130   1e-28
ref|XP_002512650.1| RNA polymerase II ctd phosphatase, putative ...   130   1e-28
ref|XP_002881287.1| hypothetical protein ARALYDRAFT_482300 [Arab...   127   1e-27
ref|XP_003530482.1| PREDICTED: RNA polymerase II C-terminal doma...   125   5e-27

>gb|AAV92930.1| putative transcription regulator CPL1 [Solanum lycopersicum]
          Length = 1227

 Score =  149 bits (377), Expect = 2e-34
 Identities = 86/184 (46%), Positives = 111/184 (60%), Gaps = 2/184 (1%)
 Frame = +3

Query: 3   QGSTFAKKFDVDAIPVEFSN-KIQPVSSGYLTSGVSNSKLRVASLPLLDLHKDHDIDSLP 179
           Q  T   K+D+  + ++ S  K Q VSS  +  G+ NSK +  S PLLDLHKDHD D+LP
Sbjct: 295 QDFTSVNKYDLGDVSIKSSGLKEQSVSSESVKPGLDNSKAKGLSFPLLDLHKDHDEDTLP 354

Query: 180 SPTREAPPSLPIHLAFDFGHGSIKPEWPVPKVALSAGNMSVHPYETDALKAVSSYQQKFG 359
           SPTR+  P  P        HG +K + P+   +L  GN  +HPYETDALKAVSSYQQKFG
Sbjct: 355 SPTRQIGPQFPATQT----HGMVKLDLPIFPASLDKGNSLLHPYETDALKAVSSYQQKFG 410

Query: 360 QTSFFTSDKLPSPTPSNDGNISDDDTCGEVASAP-HRNAQLAPALNMGQPPVSTVCNPSM 536
           ++S F S+ LPSPTPS + +    DT GEV S     NA      +MGQP +S+V   ++
Sbjct: 411 RSSLFVSENLPSPTPSEEDDSGKGDTGGEVTSFDVVHNASHLNESSMGQPILSSVPQTNI 470

Query: 537 FPGQ 548
             GQ
Sbjct: 471 LDGQ 474


>ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           3-like [Vitis vinifera]
          Length = 1238

 Score =  130 bits (328), Expect = 1e-28
 Identities = 83/170 (48%), Positives = 103/170 (60%), Gaps = 3/170 (1%)
 Frame = +3

Query: 18  AKKFDVDAIPVEFSNKIQPVSSGYLTSGVSNSKLRVASLPLLDLHKDHDIDSLPSPTREA 197
           AKK  +D+I VE  N+  P +   L  G+S+S+ R    PLLDLHKDHD DSLPSPT +A
Sbjct: 342 AKKLSLDSISVESYNQNNPDA---LKPGLSSSRGRFIFGPLLDLHKDHDEDSLPSPTGKA 398

Query: 198 PPSLPIHLAFDFGHGSIKPEWPVPKVALSAGNMSVHPYETDALKAVSSYQQKFGQTSFFT 377
           P   P++          K E    KVA    +  +HPYETDALKAVS+YQQKFG TSF  
Sbjct: 399 PQCFPVN----------KSELVTAKVAHETQDSIMHPYETDALKAVSTYQQKFGLTSFLP 448

Query: 378 SDKLPSPTPSNDGNISDDDTCGEVASAPHRNAQL---APALNMGQPPVST 518
            DKLPSPTPS +   +  D  GEV+S+   +A +   APAL  G P VS+
Sbjct: 449 IDKLPSPTPSEESGDTYGDISGEVSSSSTISAPITANAPAL--GHPIVSS 496


>ref|XP_002512650.1| RNA polymerase II ctd phosphatase, putative [Ricinus communis]
           gi|223548611|gb|EEF50102.1| RNA polymerase II ctd
           phosphatase, putative [Ricinus communis]
          Length = 1195

 Score =  130 bits (328), Expect = 1e-28
 Identities = 73/143 (51%), Positives = 90/143 (62%), Gaps = 1/143 (0%)
 Frame = +3

Query: 33  VDAIPVE-FSNKIQPVSSGYLTSGVSNSKLRVASLPLLDLHKDHDIDSLPSPTREAPPSL 209
           V+ +P + F N    +S     +GVS+ K R A LPLLDLHKDHD DSLPSPTRE+   L
Sbjct: 279 VNKLPTDSFVNNKANLSIEGPKTGVSSFKSRAALLPLLDLHKDHDADSLPSPTRESALPL 338

Query: 210 PIHLAFDFGHGSIKPEWPVPKVALSAGNMSVHPYETDALKAVSSYQQKFGQTSFFTSDKL 389
           P +                PK+ L  GN  +HPYETDALKAVSSYQQKF ++SF  +D+L
Sbjct: 339 PAYRVL------------TPKMVLDTGNSRMHPYETDALKAVSSYQQKFSKSSFALTDRL 386

Query: 390 PSPTPSNDGNISDDDTCGEVASA 458
           PSPTPS +    D DT GEV+S+
Sbjct: 387 PSPTPSEESGNGDGDTGGEVSSS 409


>ref|XP_002881287.1| hypothetical protein ARALYDRAFT_482300 [Arabidopsis lyrata subsp.
           lyrata] gi|297327126|gb|EFH57546.1| hypothetical protein
           ARALYDRAFT_482300 [Arabidopsis lyrata subsp. lyrata]
          Length = 1248

 Score =  127 bits (319), Expect = 1e-27
 Identities = 71/156 (45%), Positives = 95/156 (60%), Gaps = 1/156 (0%)
 Frame = +3

Query: 99  GVSNSKLRVASLPLLDLHKDHDIDSLPSPTREAPPSLPIHLAFDFGHGSIKPEWPVPKVA 278
           G S  + R+  LPLLDLHKDHD DSLPSPTRE  PSLP++      H  +KP +PV + +
Sbjct: 342 GASYVRSRLPMLPLLDLHKDHDADSLPSPTRETTPSLPVNGR----HTMVKPGFPVGRES 397

Query: 279 LSAGNMSVHPYETDALKAVSSYQQKFGQTSFFTSDKLPSPTPSNDGNISDDDTCGEVASA 458
            +     V+PYE+DALKAVS+Y QKFG  S F +D LPSPTPS + N  + D  GEV+S+
Sbjct: 398 QTTEGAKVYPYESDALKAVSTYHQKFGLNSVFKTDDLPSPTPSGEPNDGNGDIDGEVSSS 457

Query: 459 PHRNAQLAPALNMGQP-PVSTVCNPSMFPGQKATNT 563
             +++     L  GQ  P+ +  N    P   A ++
Sbjct: 458 VVKSSNPGTLLMYGQDVPLPSNFNSRSMPVANAVSS 493


>ref|XP_003530482.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           3-like [Glycine max]
          Length = 1244

 Score =  125 bits (314), Expect = 5e-27
 Identities = 73/148 (49%), Positives = 89/148 (60%), Gaps = 2/148 (1%)
 Frame = +3

Query: 78  SSGYLTSGVSNSKLRVASLPLLDLHKDHDIDSLPSPTREAPPSLPIHLAFDFGHGSIKPE 257
           +S  L  G ++ K R   LPLLDLHKDHD DSLPSPTREAP   P++     G   ++  
Sbjct: 340 TSQALKFGQNSIKGRGVLLPLLDLHKDHDADSLPSPTREAPSCFPVNKLLSVGESMVRSG 399

Query: 258 WPVPKVALSAGNMSVHPYETDALKAVSSYQQKFGQTSFFTSDKLPSPTPSNDGNISDDDT 437
               K+ L +     H YETDALKAVS+YQQKFG++S FT+DK PSPTPS D      DT
Sbjct: 400 SASAKMELDSEGSKFHLYETDALKAVSTYQQKFGRSSLFTNDKFPSPTPSGDCEDEVVDT 459

Query: 438 CGEVASAPHRN--AQLAPALNMGQPPVS 515
             EV+SA   +      P L + QPPVS
Sbjct: 460 NEEVSSASTGDFLTSTKPTL-LDQPPVS 486