BLASTX nr result

ID: Lithospermum22_contig00018747 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00018747
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234807.1| beta-tubulin [Solanum lycopersicum] gi|77963...   107   9e-38
gb|ACH68564.1| beta-tubulin [Solanum tuberosum]                       107   9e-38
gb|ABP65322.1| beta tubulin [Capsicum annuum]                         107   9e-38
gb|AAR37366.1| beta-tubulin [Nicotiana attenuata]                     107   9e-38
dbj|BAE47135.1| beta tubulin like protein [Pyrus pyrifolia var. ...   105   3e-37

>ref|NP_001234807.1| beta-tubulin [Solanum lycopersicum] gi|77963735|gb|ABB13293.1|
           beta-tubulin [Solanum lycopersicum]
          Length = 451

 Score =  107 bits (266), Expect(2) = 9e-38
 Identities = 48/49 (97%), Positives = 49/49 (100%)
 Frame = -2

Query: 148 GRFVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 2
           GR+VPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH
Sbjct: 60  GRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 108



 Score = 75.1 bits (183), Expect(2) = 9e-38
 Identities = 35/44 (79%), Positives = 38/44 (86%)
 Frame = -3

Query: 339 CDEHGIDPTGRYKGEANSAASDLQLERINVYYNEAGSGRFVPRA 208
           CDEHG+DPTGRYKG A  A SDLQLERINVY+NEA  GR+VPRA
Sbjct: 25  CDEHGVDPTGRYKGTA--AESDLQLERINVYFNEASGGRYVPRA 66


>gb|ACH68564.1| beta-tubulin [Solanum tuberosum]
          Length = 451

 Score =  107 bits (266), Expect(2) = 9e-38
 Identities = 48/49 (97%), Positives = 49/49 (100%)
 Frame = -2

Query: 148 GRFVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 2
           GR+VPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH
Sbjct: 60  GRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 108



 Score = 75.1 bits (183), Expect(2) = 9e-38
 Identities = 35/44 (79%), Positives = 38/44 (86%)
 Frame = -3

Query: 339 CDEHGIDPTGRYKGEANSAASDLQLERINVYYNEAGSGRFVPRA 208
           CDEHG+DPTGRYKG A  A SDLQLERINVY+NEA  GR+VPRA
Sbjct: 25  CDEHGVDPTGRYKGTA--AESDLQLERINVYFNEASGGRYVPRA 66


>gb|ABP65322.1| beta tubulin [Capsicum annuum]
          Length = 450

 Score =  107 bits (266), Expect(2) = 9e-38
 Identities = 48/49 (97%), Positives = 49/49 (100%)
 Frame = -2

Query: 148 GRFVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 2
           GR+VPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH
Sbjct: 60  GRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 108



 Score = 75.1 bits (183), Expect(2) = 9e-38
 Identities = 35/44 (79%), Positives = 38/44 (86%)
 Frame = -3

Query: 339 CDEHGIDPTGRYKGEANSAASDLQLERINVYYNEAGSGRFVPRA 208
           CDEHG+DPTGRYKG A  A SDLQLERINVY+NEA  GR+VPRA
Sbjct: 25  CDEHGVDPTGRYKGTA--AESDLQLERINVYFNEASGGRYVPRA 66


>gb|AAR37366.1| beta-tubulin [Nicotiana attenuata]
          Length = 450

 Score =  107 bits (266), Expect(2) = 9e-38
 Identities = 48/49 (97%), Positives = 49/49 (100%)
 Frame = -2

Query: 148 GRFVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 2
           GR+VPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH
Sbjct: 60  GRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 108



 Score = 75.1 bits (183), Expect(2) = 9e-38
 Identities = 35/44 (79%), Positives = 38/44 (86%)
 Frame = -3

Query: 339 CDEHGIDPTGRYKGEANSAASDLQLERINVYYNEAGSGRFVPRA 208
           CDEHG+DPTGRYKG A  A SDLQLERINVY+NEA  GR+VPRA
Sbjct: 25  CDEHGVDPTGRYKGTA--AESDLQLERINVYFNEASGGRYVPRA 66


>dbj|BAE47135.1| beta tubulin like protein [Pyrus pyrifolia var. culta]
          Length = 395

 Score =  105 bits (262), Expect(2) = 3e-37
 Identities = 47/49 (95%), Positives = 49/49 (100%)
 Frame = -2

Query: 148 GRFVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 2
           GR+VPRAVLMDLEPGTMDSIRSGP+GQIFRPDNFVFGQSGAGNNWAKGH
Sbjct: 49  GRYVPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 97



 Score = 75.1 bits (183), Expect(2) = 3e-37
 Identities = 34/44 (77%), Positives = 38/44 (86%)
 Frame = -3

Query: 339 CDEHGIDPTGRYKGEANSAASDLQLERINVYYNEAGSGRFVPRA 208
           CDEHG+DPTGRY+G+A S   DLQLERINVYYNEA  GR+VPRA
Sbjct: 15  CDEHGVDPTGRYRGDAGS---DLQLERINVYYNEASGGRYVPRA 55


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