BLASTX nr result

ID: Lithospermum22_contig00018713 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00018713
         (1157 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550826.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   275   2e-71
emb|CBI28180.3| unnamed protein product [Vitis vinifera]              271   2e-70
ref|XP_002285108.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   271   2e-70
ref|NP_001059135.1| Os07g0202100 [Oryza sativa Japonica Group] g...   271   3e-70
gb|EEC81697.1| hypothetical protein OsI_25294 [Oryza sativa Indi...   271   3e-70

>ref|XP_003550826.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 52B-like [Glycine max]
          Length = 610

 Score =  275 bits (702), Expect = 2e-71
 Identities = 137/215 (63%), Positives = 170/215 (79%), Gaps = 9/215 (4%)
 Frame = -2

Query: 1156 RSHLMNLLHAHRANGSHGRNALTLVFVETKKGADALEQWLSVKGFPSIAIHGDKVQMERE 977
            R HL+N L   + +G++G++ALTLVFVETK+GAD LE WL   GF ++AIHGDKVQMERE
Sbjct: 336  RDHLINHLRRQKVHGANGKHALTLVFVETKRGADVLEGWLLRSGFSAVAIHGDKVQMERE 395

Query: 976  RALKSFKNGRTPIMVATDVASRGLDIPHVAHVINFDLPKDIADYVHRIGRTGRAGKSGLA 797
            RAL+SFK+G TPI+VATDVASRGLDIPHVAHVINFDLP+DI +YVHRIGRTGRAGKSGLA
Sbjct: 396  RALRSFKSGLTPILVATDVASRGLDIPHVAHVINFDLPRDIDNYVHRIGRTGRAGKSGLA 455

Query: 796  TAFFSDKNLPLARSLVELMLEANQEVPAWLNQYADSSSYNGGGAR---SNSYGNRKFGGH 626
            TAFFSDKN P+A++L+ L+ EANQEVP+WLNQYA   S +GGG R   +  Y +  +GGH
Sbjct: 456  TAFFSDKNSPIAKALIGLLQEANQEVPSWLNQYATEGSSSGGGGRGYEAQRYRSGSYGGH 515

Query: 625  DFRSGASLDNGNFNYQN------QYLDSYSSKDAS 539
            DFR+    +  N+N  N      Q+++SY++ DAS
Sbjct: 516  DFRNVTEPEVQNYNCYNTNGNAVQFVESYTADDAS 550


>emb|CBI28180.3| unnamed protein product [Vitis vinifera]
          Length = 916

 Score =  271 bits (693), Expect = 2e-70
 Identities = 138/198 (69%), Positives = 158/198 (79%)
 Frame = -2

Query: 1156 RSHLMNLLHAHRANGSHGRNALTLVFVETKKGADALEQWLSVKGFPSIAIHGDKVQMERE 977
            R HLM+LL +   N +  + ALTLVFVETK+G DALEQWL + G  + AIHGDKVQMERE
Sbjct: 659  RYHLMDLLQSQMTNRTPKKYALTLVFVETKRGVDALEQWLCMNGLAATAIHGDKVQMERE 718

Query: 976  RALKSFKNGRTPIMVATDVASRGLDIPHVAHVINFDLPKDIADYVHRIGRTGRAGKSGLA 797
            RALKSFK+G TPIMVATDVA+RGLDIPHVAHVINFDLPK I DYVHRIGRTGRAGKSGLA
Sbjct: 719  RALKSFKSGATPIMVATDVAARGLDIPHVAHVINFDLPKAIDDYVHRIGRTGRAGKSGLA 778

Query: 796  TAFFSDKNLPLARSLVELMLEANQEVPAWLNQYADSSSYNGGGARSNSYGNRKFGGHDFR 617
            TAFF+D NL LA+SLVELM E+NQEVP+WLNQYA+  SY GG +R   YG  +FGGHDFR
Sbjct: 779  TAFFNDGNLSLAKSLVELMQESNQEVPSWLNQYAERPSYGGGRSR---YGGGRFGGHDFR 835

Query: 616  SGASLDNGNFNYQNQYLD 563
            S + L   ++   + Y D
Sbjct: 836  SSSQLKREDYYSPSPYGD 853


>ref|XP_002285108.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Vitis
            vinifera]
          Length = 615

 Score =  271 bits (693), Expect = 2e-70
 Identities = 138/198 (69%), Positives = 158/198 (79%)
 Frame = -2

Query: 1156 RSHLMNLLHAHRANGSHGRNALTLVFVETKKGADALEQWLSVKGFPSIAIHGDKVQMERE 977
            R HLM+LL +   N +  + ALTLVFVETK+G DALEQWL + G  + AIHGDKVQMERE
Sbjct: 371  RYHLMDLLQSQMTNRTPKKYALTLVFVETKRGVDALEQWLCMNGLAATAIHGDKVQMERE 430

Query: 976  RALKSFKNGRTPIMVATDVASRGLDIPHVAHVINFDLPKDIADYVHRIGRTGRAGKSGLA 797
            RALKSFK+G TPIMVATDVA+RGLDIPHVAHVINFDLPK I DYVHRIGRTGRAGKSGLA
Sbjct: 431  RALKSFKSGATPIMVATDVAARGLDIPHVAHVINFDLPKAIDDYVHRIGRTGRAGKSGLA 490

Query: 796  TAFFSDKNLPLARSLVELMLEANQEVPAWLNQYADSSSYNGGGARSNSYGNRKFGGHDFR 617
            TAFF+D NL LA+SLVELM E+NQEVP+WLNQYA+  SY GG +R   YG  +FGGHDFR
Sbjct: 491  TAFFNDGNLSLAKSLVELMQESNQEVPSWLNQYAERPSYGGGRSR---YGGGRFGGHDFR 547

Query: 616  SGASLDNGNFNYQNQYLD 563
            S + L   ++   + Y D
Sbjct: 548  SSSQLKREDYYSPSPYGD 565


>ref|NP_001059135.1| Os07g0202100 [Oryza sativa Japonica Group]
            gi|75325411|sp|Q6Z4K6.1|RH52B_ORYSJ RecName:
            Full=DEAD-box ATP-dependent RNA helicase 52B; AltName:
            Full=OsPL10b gi|34393986|dbj|BAC83834.1| putative
            DEAD-box RNA helicase DEAD3 [Oryza sativa Japonica Group]
            gi|113610671|dbj|BAF21049.1| Os07g0202100 [Oryza sativa
            Japonica Group] gi|222636630|gb|EEE66762.1| hypothetical
            protein OsJ_23477 [Oryza sativa Japonica Group]
          Length = 638

 Score =  271 bits (692), Expect = 3e-70
 Identities = 134/191 (70%), Positives = 153/191 (80%), Gaps = 1/191 (0%)
 Frame = -2

Query: 1156 RSHLMNLLHAHRANGSHGRNALTLVFVETKKGADALEQWLSVKGFPSIAIHGDKVQMERE 977
            RS+LM+LLHA RANG+HG+ ALTLVFVETK+GADALE WL   GFP+ +IHGD+ Q ERE
Sbjct: 409  RSYLMDLLHAQRANGTHGKQALTLVFVETKRGADALENWLYNNGFPATSIHGDRTQQERE 468

Query: 976  RALKSFKNGRTPIMVATDVASRGLDIPHVAHVINFDLPKDIADYVHRIGRTGRAGKSGLA 797
             AL+SFK+G TPI+VATDVA+RGLDIPHVAHVINFDLP DI DYVHRIGRTGRAGKSGLA
Sbjct: 469  YALRSFKSGATPILVATDVAARGLDIPHVAHVINFDLPNDIDDYVHRIGRTGRAGKSGLA 528

Query: 796  TAFFSDKNLPLARSLVELMLEANQEVPAWLNQYADSSSYNGGGARS-NSYGNRKFGGHDF 620
            TAFF++ N PLAR L ELM EANQEVP WL +YA  SS+ GGG R+  S G  +FGG DF
Sbjct: 529  TAFFNESNTPLARPLSELMQEANQEVPQWLERYAARSSFGGGGGRNRRSGGGARFGGRDF 588

Query: 619  RSGASLDNGNF 587
            R       G +
Sbjct: 589  RRDRGSGGGGY 599


>gb|EEC81697.1| hypothetical protein OsI_25294 [Oryza sativa Indica Group]
          Length = 639

 Score =  271 bits (692), Expect = 3e-70
 Identities = 134/191 (70%), Positives = 153/191 (80%), Gaps = 1/191 (0%)
 Frame = -2

Query: 1156 RSHLMNLLHAHRANGSHGRNALTLVFVETKKGADALEQWLSVKGFPSIAIHGDKVQMERE 977
            RS+LM+LLHA RANG+HG+ ALTLVFVETK+GADALE WL   GFP+ +IHGD+ Q ERE
Sbjct: 410  RSYLMDLLHAQRANGTHGKQALTLVFVETKRGADALENWLYNNGFPATSIHGDRTQQERE 469

Query: 976  RALKSFKNGRTPIMVATDVASRGLDIPHVAHVINFDLPKDIADYVHRIGRTGRAGKSGLA 797
             AL+SFK+G TPI+VATDVA+RGLDIPHVAHVINFDLP DI DYVHRIGRTGRAGKSGLA
Sbjct: 470  YALRSFKSGATPILVATDVAARGLDIPHVAHVINFDLPNDIDDYVHRIGRTGRAGKSGLA 529

Query: 796  TAFFSDKNLPLARSLVELMLEANQEVPAWLNQYADSSSYNGGGARS-NSYGNRKFGGHDF 620
            TAFF++ N PLAR L ELM EANQEVP WL +YA  SS+ GGG R+  S G  +FGG DF
Sbjct: 530  TAFFNESNTPLARPLSELMQEANQEVPQWLERYAARSSFGGGGGRNRRSGGGARFGGRDF 589

Query: 619  RSGASLDNGNF 587
            R       G +
Sbjct: 590  RRDRGSGGGGY 600


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